Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO447G0260 Papaver somniferum HOM05D005647 ORTHO05D006968 0.0e+00 1362.4 686 100.0
PSO541G4932 Papaver somniferum HOM05D005647 ORTHO05D006968 0.0e+00 1133.2 682 86.4
PSO675G6613 Papaver somniferum HOM05D005647 ORTHO05D006968 0.0e+00 1088.9 684 83.9
TAR623G0344 Trochodendron aralioides HOM05D005647 ORTHO05D006968 2.0e-156 557.0 701 47.9
GSVIVG01025064001 Vitis vinifera HOM05D005647 ORTHO05D006968 1.1e-133 481.5 702 43.6
Rhsim01G0223800 Rhododendron simsii HOM05D005647 ORTHO05D006968 9.2e-133 478.4 705 43.5
MBI14_g34527_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 1.1e-125 454.9 757 41.9
Actinidia00810 Actinidia chinensis HOM05D005647 ORTHO05D006968 9.2e-125 451.8 707 42.3
Ciclev10027867m.g Citrus clementina HOM05D005647 ORTHO05D006968 9.2e-125 451.8 648 43.4
QL03p069904 Quercus lobata HOM05D005647 ORTHO05D006968 2.1e-124 450.7 700 44.0
CiPaw.13G102300 Carya illinoinensis HOM05D005647 ORTHO05D006968 1.0e-123 448.4 357 64.7
Lj1A178T39 Lonicera japonica HOM05D005647 ORTHO05D006968 5.1e-123 446.0 513 50.7
Aqoxy4G03106 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 4.3e-122 443.0 378 60.8
Hund18946 Selenicereus undatus HOM05D005647 ORTHO05D006968 4.7e-121 439.5 377 60.2
CANSAT54G2414 Cannabis sativa HOM05D005647 ORTHO05D006968 1.1e-120 438.3 383 60.6
Cfa011418 Carpinus fangiana HOM05D005647 ORTHO05D006968 2.4e-120 437.2 706 42.5
Potri.009G025800 Populus trichocarpa HOM05D005647 ORTHO05D006968 8.9e-120 435.3 493 51.3
MD11G1117900 Malus domestica HOM05D005647 ORTHO05D006968 5.8e-119 432.6 703 41.1
COL.COLO4_18417 Corchorus olitorius HOM05D005647 ORTHO05D006968 9.9e-119 431.8 343 63.8
Atru.chr3.3782 Acer truncatum HOM05D005647 ORTHO05D006968 1.3e-118 431.4 529 48.4
Sc14g0000850 Simmondsia chinensis HOM05D005647 ORTHO05D006968 2.2e-118 430.6 344 63.7
Gorai.009G103000 Gossypium raimondii HOM05D005647 ORTHO05D006968 8.4e-118 428.7 406 55.9
RcHm_v2.0_Chr5g0062191 Rosa chinensis HOM05D005647 ORTHO05D006968 1.4e-117 427.9 344 64.8
Ah.15g096320 Amaranthus hybridus HOM05D005647 ORTHO05D006968 3.2e-117 426.8 351 61.5
Gohir.A05G099200 Gossypium hirsutum HOM05D005647 ORTHO05D006968 7.1e-117 425.6 656 42.2
EL10Ac7g15937 Beta vulgaris HOM05D005647 ORTHO05D006968 9.2e-117 425.2 343 62.7
RcHm_v2.0_Chr4g0385531 Rosa chinensis HOM05D005647 ORTHO05D006968 2.1e-116 424.1 344 64.5
Gohir.D05G099100 Gossypium hirsutum HOM05D005647 ORTHO05D006968 3.5e-116 423.3 406 55.4
TWI75G1819 Tripterygium wilfordii HOM05D005647 ORTHO05D006968 4.6e-116 422.9 472 49.6
Solyc06g005200.3 Solanum lycopersicum HOM05D005647 ORTHO05D006968 1.0e-115 421.8 344 62.2
Thecc.09G331200 Theobroma cacao HOM05D005647 ORTHO05D006968 1.3e-115 421.4 571 45.0
Nitab4.5_0000022g0330 Nicotiana tabacum HOM05D005647 ORTHO05D006968 1.7e-115 421.0 387 57.4
Cc01_g12040 Coffea canephora HOM05D005647 ORTHO05D006968 3.9e-115 419.9 701 39.1
FvH4_3g34550 Fragaria vesca HOM05D005647 ORTHO05D006968 5.1e-115 419.5 344 63.1
Aqoxy4G03104_Aqoxy4G03103 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 6.6e-115 419.1 344 62.8
Nitab4.5_0008854g0020 Nicotiana tabacum HOM05D005647 ORTHO05D006968 6.6e-115 419.1 368 58.4
FAN11G0841 Fragaria x ananassa HOM05D005647 ORTHO05D006968 1.1e-114 418.3 344 62.8
Sopen06g001190 Solanum pennellii HOM05D005647 ORTHO05D006968 1.1e-114 418.3 388 57.2
Duzib150G0770 Durio zibethinus HOM05D005647 ORTHO05D006968 1.9e-114 417.5 476 49.6
FAN21G3075 Fragaria x ananassa HOM05D005647 ORTHO05D006968 1.9e-114 417.5 344 63.1
FAN25G1201 Fragaria x ananassa HOM05D005647 ORTHO05D006968 4.3e-114 416.4 344 62.8
HanXRQChr14g0429211 Helianthus annuus HOM05D005647 ORTHO05D006968 4.3e-114 416.4 466 50.2
PGSC0003DMG400033668 Solanum tuberosum HOM05D005647 ORTHO05D006968 7.3e-114 415.6 388 57.2
FAN16G2614 Fragaria x ananassa HOM05D005647 ORTHO05D006968 9.6e-114 415.2 344 62.5
Haze_23998 Corylus avellana HOM05D005647 ORTHO05D006968 4.7e-113 412.9 420 55.0
Manes.04G028600 Manihot esculenta HOM05D005647 ORTHO05D006968 1.4e-112 411.4 337 62.0
Actinidia03769 Actinidia chinensis HOM05D005647 ORTHO05D006968 4.0e-112 409.8 664 42.0
Lsat_1_v5_gn_5_167021 Lactuca sativa HOM05D005647 ORTHO05D006968 4.0e-112 409.8 374 59.1
AUR62001855 Chenopodium quinoa HOM05D005647 ORTHO05D006968 7.6e-111 405.6 343 60.6
DCAR_005295 Daucus carota HOM05D005647 ORTHO05D006968 7.6e-111 405.6 355 60.3
vmacro14498 Vaccinium macrocarpon HOM05D005647 ORTHO05D006968 7.6e-111 405.6 706 39.7
ECA248G2619 Erigeron canadensis HOM05D005647 ORTHO05D006968 9.9e-111 405.2 383 56.4
Lj3g0017565 Lotus japonicus HOM05D005647 ORTHO05D006968 9.9e-111 405.2 454 50.9
Sed0021109 Sechium edule HOM05D005647 ORTHO05D006968 1.7e-110 404.4 731 37.6
AT5G59980 Arabidopsis thaliana HOM05D005647 ORTHO05D006968 4.9e-110 402.9 344 59.9
CDE08G0081 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 8.4e-110 402.1 462 49.6
AL8G36550 Arabidopsis lyrata HOM05D005647 ORTHO05D006968 1.1e-109 401.7 344 59.9
Glyma.13G196800 Glycine max HOM05D005647 ORTHO05D006968 1.1e-109 401.7 459 50.1
ATR0787G117 Amborella trichopoda HOM05D005647 ORTHO05D006968 3.2e-109 400.2 307 63.2
MSTRG.21166 Avicennia marina HOM05D005647 ORTHO05D006968 4.2e-109 399.8 344 59.6
Ca_01361_v3 Cicer arietinum L. HOM05D005647 ORTHO05D006968 4.2e-109 399.8 396 55.3
Carub.0004s0912 Capsella rubella HOM05D005647 ORTHO05D006968 1.6e-108 397.9 344 59.6
TPR.G17867 Trifolium pratense HOM05D005647 ORTHO05D006968 2.1e-108 397.5 389 55.8
ClCG02G020580 Citrullus lanatus HOM05D005647 ORTHO05D006968 2.7e-108 397.1 351 57.5
Prupe.6G088000 Prunus persica HOM05D005647 ORTHO05D006968 3.0e-107 393.7 652 41.6
CDE02G4018 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 3.9e-107 393.3 317 62.1
PGR119G0370 Punica granatum HOM05D005647 ORTHO05D006968 8.7e-107 392.1 357 56.9
TPR.G11621 Trifolium pratense HOM05D005647 ORTHO05D006968 1.5e-106 391.3 343 60.1
VMungo1080G1709 Vigna mungo HOM05D005647 ORTHO05D006968 2.5e-106 390.6 347 59.1
Thhalv10012856m.g Eutrema salsugineum HOM05D005647 ORTHO05D006968 3.3e-106 390.2 349 58.7
Psat5g282040 Pisum sativum HOM05D005647 ORTHO05D006968 7.3e-106 389.0 448 49.3
Migut.D02155 Erythranthe guttata HOM05D005647 ORTHO05D006968 1.6e-105 387.9 407 52.1
Eucgr.A02758 Eucalyptus grandis HOM05D005647 ORTHO05D006968 1.6e-105 387.9 715 37.9
Lalb_Chr24g0394311 Lupinus albus HOM05D005647 ORTHO05D006968 3.6e-105 386.7 348 57.2
Cpa.g.sc139.4 Carica papaya HOM05D005647 ORTHO05D006968 6.2e-105 386.0 705 38.3
SGA_v2.0_scaffold61G21232 Striga asiatica HOM05D005647 ORTHO05D006968 6.2e-105 386.0 343 56.6
Aa31LG1G12110 Aethionema arabicum HOM05D005647 ORTHO05D006968 2.4e-104 384.0 349 58.2
CAN.G200.2 Capsicum annuum HOM05D005647 ORTHO05D006968 4.0e-104 383.3 306 62.1
Medtr2g096090 Medicago truncatula HOM05D005647 ORTHO05D006968 1.2e-103 381.7 403 51.4
MELO3C025708.2 Cucumis melo HOM05D005647 ORTHO05D006968 5.8e-103 379.4 390 51.3
Phvul.L002619 Phaseolus vulgaris HOM05D005647 ORTHO05D006968 4.9e-102 376.3 405 50.9
Sabra09G0017200 Salix brachista HOM05D005647 ORTHO05D000187 8.4e-102 375.6 498 47.2
BolC2t07297H Brassica oleracea HOM05D005647 ORTHO05D006968 5.4e-101 372.9 421 51.1
Peaxi162Scf00006g01310 Petunia axillaris HOM05D005647 ORTHO05D006968 1.2e-100 371.7 343 57.1
Aa31LG5G21920 Aethionema arabicum HOM05D005647 ORTHO05D006968 1.6e-100 371.3 318 60.7
BcaB05g22600 Brassica carinata HOM05D005647 ORTHO05D006968 1.6e-100 371.3 351 57.3
C02p11970 Brassica napus HOM05D005647 ORTHO05D006968 1.6e-100 371.3 374 55.1
BraA02t05750Z Brassica rapa HOM05D005647 ORTHO05D006968 1.6e-100 371.3 374 55.1
unitig_736.g22430 Utricularia gibba HOM05D005647 ORTHO05D006968 1.6e-100 371.3 343 53.9
A02p06680 Brassica napus HOM05D005647 ORTHO05D006968 1.0e-99 368.6 374 54.8
THA.LOC104809599 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 6.7e-99 365.9 344 55.5
BcaC04g19653 Brassica carinata HOM05D005647 ORTHO05D006968 1.9e-98 364.4 355 54.4
BolC9t58115H Brassica oleracea HOM05D005647 ORTHO05D006968 1.9e-98 364.4 355 54.4
SalBow3G2669 Salvia bowleyana HOM05D005647 ORTHO05D006968 4.3e-98 363.2 417 48.2
C09p52480 Brassica napus HOM05D005647 ORTHO05D006968 5.6e-98 362.8 355 53.8
SalBow3G1239 Salvia bowleyana HOM05D005647 ORTHO05D006968 5.6e-98 362.8 417 48.2
BraA10t43800Z Brassica rapa HOM05D005647 ORTHO05D006968 7.4e-98 362.5 355 53.8
Oeu058515.3 Olea europaea HOM05D005647 ORTHO05D006968 9.6e-98 362.1 837 33.9
BcaB08g36205 Brassica carinata HOM05D005647 ORTHO05D006968 8.1e-97 359.0 353 54.4
A10p17190 Brassica napus HOM05D005647 ORTHO05D006968 9.0e-96 355.5 351 54.4
Sp6g21650 Schrenkiella parvula HOM05D005647 ORTHO05D006968 1.9e-93 347.8 443 47.4
arahy.Tifrunner.gnm1.ann1.7X2355 Arachis hypogaea HOM05D005647 ORTHO05D006968 4.6e-92 343.2 366 50.5
THA.LOC104813123 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 3.0e-91 340.5 345 54.2
arahy.Tifrunner.gnm1.ann1.W04KXW Arachis hypogaea HOM05D005647 ORTHO05D006968 1.1e-90 338.6 350 51.7
arahy.Tifrunner.gnm1.ann1.S4SLQI Arachis hypogaea HOM05D005647 ORTHO05D006968 4.9e-86 323.2 385 46.0
arahy.Tifrunner.gnm1.ann1.ZDAZ4C Arachis hypogaea HOM05D005647 ORTHO05D006968 1.3e-81 308.5 385 45.2
Nn2g13828 Nelumbo nucifera HOM05D005647 ORTHO05D006968 2.6e-79 300.8 205 73.7
Gorai.013G129300 Gossypium raimondii HOM05D005647 ORTHO05D006968 2.9e-70 270.8 239 60.3
AUR62009649 Chenopodium quinoa HOM05D005647 ORTHO05D006968 6.5e-70 269.6 277 53.4
Pp3c23_18130 Physcomitrium patens HOM05D005647 ORTHO05D006968 8.8e-67 259.2 290 45.5
Mapoly0041s0094 Marchantia polymorpha HOM05D005647 ORTHO05D006968 4.5e-63 246.9 330 42.4
SEGI_32841 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 1.7e-62 245.0 235 51.1
VMungo1127G1784 Vigna mungo HOM05D005647 ORTHO05D006968 3.8e-62 243.8 209 58.4
Os12g0175900 Oryza sativa ssp. japonica HOM05D005647 ORTHO05D006968 4.1e-56 223.8 280 42.5
Zm00001eb163100 Zea mays HOM05D005647 ORTHO05D006968 1.6e-52 211.8 318 38.7
CsaV3_6G022020 Cucumis sativus L. HOM05D005647 ORTHO05D006968 3.6e-52 210.7 501 33.9
Dinv32824 Davidia involucrata HOM05D005647 ORTHO05D006968 1.8e-48 198.4 448 34.6
Aqoxy4G01384 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 3.8e-38 164.1 113 69.9
MBI03_g45445_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 5.5e-37 160.2 122 65.6
VMungo1127G0608 Vigna mungo HOM05D005647 ORTHO05D006968 2.1e-36 158.3 283 37.8
Lsat_1_v5_gn_5_100621 Lactuca sativa HOM05D005647 ORTHO05D006968 4.7e-28 130.6 115 60.0
CARHR273620 Cardamine hirsuta HOM05D005647 ORTHO05D006968 1.2e-26 125.9 158 48.7
VMungo1127G1495 Vigna mungo HOM05D005647 ORTHO05D006968 1.5e-26 125.6 137 51.8
SMO348G0064 Selaginella moellendorffii HOM05D005647 ORTHO05D006968 4.1e-24 117.5 128 44.5
Cre02.g088050 Chlamydomonas reinhardtii HOM05D005647 ORTHO05D006968 3.5e-23 114.4 164 36.0
EL10Ac9g22529 Beta vulgaris HOM05D005647 ORTHO05D006968 1.1e-21 109.4 86 64.0
SEGI_06158 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 1.1e-21 109.4 106 53.8
MBI10_g46876_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 4.0e-19 100.9 82 58.5
QL03p025644 Quercus lobata HOM05D005647 ORTHO05D006968 2.4e-16 91.7 58 79.3
MCO02G042 Micromonas commoda HOM05D005647 ORTHO05D006968 7.0e-16 90.1 159 32.7
MBI14_g07932_MAGBIO Magnolia biondii HOM05D002922 ORTHO05D006968 2.3e-14 85.1 56 75.0
Gohir.D11G155700 Gossypium hirsutum HOM05D001229 ORTHO05D011852 1.4e-11 75.9 55 69.1
Gorai.007G165900 Gossypium raimondii HOM05D001229 ORTHO05D011852 1.4e-11 75.9 55 69.1


User provided reference genes

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