Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3176 Papaver somniferum HOM05D004973 ORTHO05D006119 1.6e-89 332.8 178 100.0
Dinv37236 Davidia involucrata HOM05D004973 ORTHO05D006119 1.6e-20 103.6 195 40.5
TAR623G0749 Trochodendron aralioides HOM05D004973 ORTHO05D006119 6.1e-20 101.7 160 41.2
Aqoxy4G03126 Aquilegia oxysepala HOM05D004973 ORTHO05D006119 5.1e-19 98.6 188 41.5
GSVIVG01025573001 Vitis vinifera HOM05D004973 ORTHO05D009107 1.1e-18 97.4 195 40.0
QL07p045858 Quercus lobata HOM05D004973 ORTHO05D006119 3.3e-18 95.9 148 44.6
Thecc.05G050500 Theobroma cacao HOM05D004973 ORTHO05D006119 5.7e-18 95.1 166 41.6
Nn2g12943 Nelumbo nucifera HOM05D004973 ORTHO05D006119 7.4e-18 94.7 154 43.5
CSS0037973 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 1.3e-17 94.0 167 40.1
Nitab4.5_0000202g0430 Nicotiana tabacum HOM05D004973 ORTHO05D006119 2.2e-17 93.2 160 40.0
CSS0008181 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 4.8e-17 92.0 144 41.7
CiPaw.10G138900 Carya illinoinensis HOM05D004973 ORTHO05D006119 6.3e-17 91.7 172 40.1
HanXRQChr07g0195961 Helianthus annuus HOM05D004973 ORTHO05D006119 6.3e-17 91.7 172 38.4
Hma1.2p1_0111F.1_g053560 Hydrangea macrophylla HOM05D004973 ORTHO05D006119 6.3e-17 91.7 203 34.0
Nitab4.5_0016310g0010 Nicotiana tabacum HOM05D004973 ORTHO05D006119 8.2e-17 91.3 124 45.2
Nn2g10587 Nelumbo nucifera HOM05D004973 ORTHO05D006119 1.1e-16 90.9 184 36.4
Cpa.g.sc114.29 Carica papaya HOM05D004973 ORTHO05D006119 1.4e-16 90.5 137 43.1
Lsat_1_v5_gn_2_110141 Lactuca sativa HOM05D004973 ORTHO05D006119 1.4e-16 90.5 95 53.7
CSS0000366 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 3.1e-16 89.4 144 41.0
MELO3C003079.2 Cucumis melo HOM05D004973 ORTHO05D006119 4.1e-16 89.0 110 49.1
MBI05_g16176_MAGBIO Magnolia biondii HOM05D004973 ORTHO05D006119 6.9e-16 88.2 76 65.8
CsaV3_4G024460 Cucumis sativus L. HOM05D004973 ORTHO05D006119 9.1e-16 87.8 87 57.5
MSTRG.26739 Avicennia marina HOM05D004973 ORTHO05D006119 1.2e-15 87.4 85 55.3
Gohir.D09G155800 Gossypium hirsutum HOM05D004973 ORTHO05D006119 1.2e-15 87.4 108 52.8
Lj2A104T80 Lonicera japonica HOM05D004973 ORTHO05D006119 1.2e-15 87.4 184 37.0
ClCG04G008700 Citrullus lanatus HOM05D004973 ORTHO05D006119 1.5e-15 87.0 88 55.7
Manes.08G000800 Manihot esculenta HOM05D004973 ORTHO05D006119 1.5e-15 87.0 165 42.4
MSTRG.10290 Avicennia marina HOM05D004973 ORTHO05D006119 2.0e-15 86.7 85 54.1
Gohir.D04G116800 Gossypium hirsutum HOM05D004973 ORTHO05D006119 2.0e-15 86.7 78 59.0
Ciclev10012401m.g Citrus clementina HOM05D004973 ORTHO05D006119 2.6e-15 86.3 169 39.1
Gorai.006G177300 Gossypium raimondii HOM05D004973 ORTHO05D006119 2.6e-15 86.3 127 45.7
HanXRQChr14g0453421 Helianthus annuus HOM05D004973 ORTHO05D006119 2.6e-15 86.3 182 37.4
FAN14G1622 Fragaria x ananassa HOM05D004973 ORTHO05D006119 3.4e-15 85.9 178 37.6
Gohir.A09G160200 Gossypium hirsutum HOM05D004973 ORTHO05D006119 3.4e-15 85.9 151 43.0
RcHm_v2.0_Chr3g0468111 Rosa chinensis HOM05D004973 ORTHO05D006119 3.4e-15 85.9 174 38.5
Gorai.009G421700 Gossypium raimondii HOM05D004973 ORTHO05D006119 4.5e-15 85.5 75 60.0
Sabra06G0166700 Salix brachista HOM05D004973 ORTHO05D006119 4.5e-15 85.5 172 39.5
Migut.L01647 Erythranthe guttata HOM05D004973 ORTHO05D006119 5.9e-15 85.1 167 39.5
DCAR_017742 Daucus carota HOM05D004973 ORTHO05D006119 7.7e-15 84.7 167 39.5
Gohir.A04G077600 Gossypium hirsutum HOM05D004973 ORTHO05D006119 7.7e-15 84.7 75 58.7
Manes.09G071500 Manihot esculenta HOM05D004973 ORTHO05D006119 7.7e-15 84.7 77 63.6
Prupe.6G245100 Prunus persica HOM05D004973 ORTHO05D009107 7.7e-15 84.7 166 38.6
FAN09G0990 Fragaria x ananassa HOM05D004973 ORTHO05D006119 1.0e-14 84.3 139 40.3
Potri.006G216300 Populus trichocarpa HOM05D004973 ORTHO05D006119 1.0e-14 84.3 174 39.1
Potri.016G082700 Populus trichocarpa HOM05D004973 ORTHO05D006119 1.0e-14 84.3 154 40.9
Haze_20682 Corylus avellana HOM05D004973 ORTHO05D006119 1.3e-14 84.0 169 39.1
PGSC0003DMG400011051 Solanum tuberosum HOM05D004973 ORTHO05D006119 1.3e-14 84.0 133 45.9
Peaxi162Scf00472g00079 Petunia axillaris HOM05D004973 ORTHO05D006119 1.7e-14 83.6 110 49.1
Peaxi162Scf00597g00824 Petunia axillaris HOM05D004973 ORTHO05D006119 1.7e-14 83.6 157 40.8
CiPaw.09G185000 Carya illinoinensis HOM05D004973 ORTHO05D006119 2.2e-14 83.2 164 40.9
COL.COLO4_10304 Corchorus olitorius HOM05D004973 ORTHO05D006119 2.2e-14 83.2 86 55.8
Dinv35683 Davidia involucrata HOM05D004973 ORTHO05D006119 2.9e-14 82.8 181 34.8
FAN02G2240 Fragaria x ananassa HOM05D004973 ORTHO05D006119 3.8e-14 82.4 166 39.8
FvH4_6g14910 Fragaria vesca HOM05D004973 ORTHO05D006119 6.5e-14 81.6 163 39.9
Sopen10g033860 Solanum pennellii HOM05D004973 ORTHO05D006119 8.5e-14 81.3 133 43.6
FAN05G3543 Fragaria x ananassa HOM05D004973 ORTHO05D006119 1.4e-13 80.5 178 34.3
Lj3A975T70 Lonicera japonica HOM05D004973 ORTHO05D006119 2.5e-13 79.7 88 54.5
MD12G1129800 Malus domestica HOM05D004973 ORTHO05D006119 3.2e-13 79.3 146 40.4
MD04G1111000 Malus domestica HOM05D004973 ORTHO05D006119 9.4e-13 77.8 133 38.3
Oeu060067.1 Olea europaea HOM05D004973 ORTHO05D006119 9.4e-13 77.8 157 36.9
Solyc10g084420.2 Solanum lycopersicum HOM05D004973 ORTHO05D006119 9.4e-13 77.8 147 39.5
SGA_v2.0_scaffold35G14182 Striga asiatica HOM05D004973 ORTHO05D006119 1.2e-12 77.4 158 37.3
Glyma.19G176500 Glycine max HOM05D004973 ORTHO05D006119 1.6e-12 77.0 171 37.4
C04p65800 Brassica napus HOM05D004973 ORTHO05D006119 2.7e-12 76.3 113 48.7
BolC4t28082H Brassica oleracea HOM05D004973 ORTHO05D006119 2.7e-12 76.3 113 48.7
Lj5g0023317 Lotus japonicus HOM05D004973 ORTHO05D006119 2.7e-12 76.3 86 52.3
BcaNung06611 Brassica carinata HOM05D004973 ORTHO05D006119 3.6e-12 75.9 105 48.6
Nitab4.5_0000643g0210 Nicotiana tabacum HOM05D004973 ORTHO05D006119 3.6e-12 75.9 129 43.4
Phvul.007G161600 Phaseolus vulgaris HOM05D004973 ORTHO05D006119 3.6e-12 75.9 90 52.2
SalBow4G1465 Salvia bowleyana HOM05D004973 ORTHO05D006119 4.7e-12 75.5 152 38.8
Sed0023997 Sechium edule HOM05D004973 ORTHO05D006119 4.7e-12 75.5 96 46.9
AL4G33680 Arabidopsis lyrata HOM05D004973 ORTHO05D006119 6.1e-12 75.1 90 51.1
ECA238G2925 Erigeron canadensis HOM05D004973 ORTHO05D006119 6.1e-12 75.1 128 39.1
TWI53G0396 Tripterygium wilfordii HOM05D004973 ORTHO05D006119 6.1e-12 75.1 152 40.8
DCAR_014954 Daucus carota HOM05D000267 ORTHO05D000298 8.0e-12 74.7 101 48.5
Migut.J00395 Erythranthe guttata HOM05D004973 ORTHO05D006119 8.0e-12 74.7 134 40.3
Os03g0283400 Oryza sativa ssp. japonica HOM05D004973 ORTHO05D006119 8.0e-12 74.7 124 41.1
MSTRG.19121 Avicennia marina HOM05D004973 ORTHO05D006119 1.8e-11 73.6 193 35.2
Hund12070 Selenicereus undatus HOM05D004973 ORTHO05D006119 2.3e-11 73.2 71 57.7
Eucgr.K03187 Eucalyptus grandis HOM05D004973 ORTHO05D006119 3.0e-11 72.8 165 37.0
Lalb_Chr06g0171201 Lupinus albus HOM05D004973 ORTHO05D006119 3.0e-11 72.8 89 50.6
A03p20600 Brassica napus HOM05D000861 ORTHO05D001799 3.9e-11 72.4 89 49.4
Eucgr.A01206 Eucalyptus grandis HOM05D004973 ORTHO05D006119 3.9e-11 72.4 132 40.9
vmacro20083 Vaccinium macrocarpon HOM05D004973 ORTHO05D006119 3.9e-11 72.4 77 57.1
Atru.chr8.2512 Acer truncatum HOM05D004973 ORTHO05D006119 5.2e-11 72.0 132 37.9
BcaNung06612 Brassica carinata HOM05D004973 ORTHO05D006119 5.2e-11 72.0 107 45.8
Psat6g069760 Pisum sativum HOM05D004973 ORTHO05D006119 8.8e-11 71.2 79 55.7
BraA03t11302Z Brassica rapa HOM05D000861 ORTHO05D001799 1.1e-10 70.9 87 50.6
CANSAT80G1895 Cannabis sativa HOM05D004973 ORTHO05D006119 1.1e-10 70.9 161 35.4
Glyma.03G176000 Glycine max HOM05D004973 ORTHO05D006119 1.1e-10 70.9 162 38.3
Sp4g19620 Schrenkiella parvula HOM05D004973 ORTHO05D006119 1.1e-10 70.9 105 45.7
A04p28480 Brassica napus HOM05D004973 ORTHO05D006119 1.5e-10 70.5 113 46.0
PGR004G2597 Punica granatum HOM05D004973 ORTHO05D006119 1.5e-10 70.5 69 55.1
AT2G37300 Arabidopsis thaliana HOM05D004973 ORTHO05D006119 2.0e-10 70.1 167 37.1
BraA04t18326Z Brassica rapa HOM05D004973 ORTHO05D006119 2.0e-10 70.1 121 43.8
Carub.0004s1921 Capsella rubella HOM05D004973 ORTHO05D006119 2.0e-10 70.1 88 47.7
Thhalv10017275m.g Eutrema salsugineum HOM05D004973 ORTHO05D006119 2.0e-10 70.1 149 40.3
Medtr1g067220 Medicago truncatula HOM05D004973 ORTHO05D006119 2.0e-10 70.1 163 38.0
arahy.Tifrunner.gnm1.ann1.P2DQEA Arachis hypogaea HOM05D004973 ORTHO05D006119 2.6e-10 69.7 135 38.5
HPP92_001696 Vanilla planifolia HOM05D004973 ORTHO05D006119 2.6e-10 69.7 86 47.7
Glyma.10G047400 Glycine max HOM05D004973 ORTHO05D006119 3.3e-10 69.3 180 35.6
TPR.G35656 Trifolium pratense HOM05D004973 ORTHO05D006119 3.3e-10 69.3 165 37.6
CsaV3_3G035290 Cucumis sativus L. HOM05D004973 ORTHO05D006119 4.4e-10 68.9 120 39.2
C03p24200 Brassica napus HOM05D000861 ORTHO05D001799 5.7e-10 68.6 74 52.7
BolC3t14814H Brassica oleracea HOM05D004973 ORTHO05D006119 5.7e-10 68.6 74 52.7
THA.LOC104823441 Tarenaya hassleriana HOM05D004973 ORTHO05D006119 5.7e-10 68.6 94 46.8
VMungo0720G0246 Vigna mungo HOM05D004973 ORTHO05D006119 7.4e-10 68.2 117 47.0
CAN.G867.6 Capsicum annuum HOM05D004973 ORTHO05D006119 1.3e-09 67.4 56 62.5
Cc06_g03330 Coffea canephora HOM05D004973 ORTHO05D006119 1.3e-09 67.4 150 40.0
Sc01g0003720 Simmondsia chinensis HOM05D004973 ORTHO05D006119 1.7e-09 67.0 128 39.8
BcaC02g07519 Brassica carinata HOM05D004973 ORTHO05D006119 2.2e-09 66.6 76 51.3
A05p08610 Brassica napus HOM05D004973 ORTHO05D006119 2.2e-09 66.6 73 52.1
C04p10700 Brassica napus HOM05D004973 ORTHO05D006119 2.2e-09 66.6 76 51.3
MELO3C009296.2 Cucumis melo HOM05D004973 ORTHO05D006119 2.2e-09 66.6 121 38.8
Zm00001eb012960 Zea mays HOM05D004973 ORTHO05D006119 4.8e-09 65.5 177 33.3
PGR004G0295 Punica granatum HOM05D004973 ORTHO05D006119 6.3e-09 65.1 75 50.7
RhsimUnG0120900 Rhododendron simsii HOM05D004973 ORTHO05D006119 8.2e-09 64.7 53 58.5
arahy.Tifrunner.gnm1.ann1.C8BSPY Arachis hypogaea HOM05D004973 ORTHO05D006119 1.1e-08 64.3 124 39.5
CDE04G2944 Ceratophyllum demersum HOM05D005673 ORTHO05D007081 1.4e-08 63.9 157 35.0
Lalb_Chr02g0153461 Lupinus albus HOM05D004973 ORTHO05D006119 1.8e-08 63.5 109 42.2
ATR0594G102 Amborella trichopoda HOM05D004973 ORTHO05D006119 5.3e-08 62.0 174 35.1
Oeu029113.1 Olea europaea HOM05D004973 ORTHO05D006119 5.3e-08 62.0 158 34.8
THA.LOC104805339 Tarenaya hassleriana HOM05D004973 ORTHO05D006119 5.3e-08 62.0 71 52.1
VMungo1383G2298 Vigna mungo HOM05D004973 ORTHO05D006119 2.0e-07 60.1 141 36.9
unitig_60.g25816 Utricularia gibba HOM05D004973 ORTHO05D006119 4.5e-07 58.9 173 32.9
ClCG10G020720 Citrullus lanatus HOM05D004973 ORTHO05D006119 1.3e-06 57.4 136 32.4
arahy.Tifrunner.gnm1.ann1.X85SHR Arachis hypogaea HOM05D004973 ORTHO05D006119 5.0e-06 55.5 62 48.4


User provided reference genes

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