Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G1823 Papaver somniferum HOM05D004274 ORTHO05D004980 2.5e-113 412.1 214 100.0
PSO339G1940 Papaver somniferum HOM05D004274 ORTHO05D004980 9.6e-105 383.6 219 90.9
Glyma.18G049100 Glycine max HOM05D004274 ORTHO05D004980 2.1e-67 259.6 153 82.4
Lalb_Chr15g0085561 Lupinus albus HOM05D004274 ORTHO05D004980 1.4e-66 256.9 161 78.9
CANSAT54G0105 Cannabis sativa HOM05D004274 ORTHO05D004980 2.3e-66 256.1 164 76.8
Peaxi162Scf00293g00719 Petunia axillaris HOM05D004274 ORTHO05D004980 8.8e-66 254.2 153 81.7
PGSC0003DMG400015127 Solanum tuberosum HOM05D004274 ORTHO05D004980 2.6e-65 252.7 152 80.9
Nitab4.5_0000539g0100 Nicotiana tabacum HOM05D004274 ORTHO05D004980 4.4e-65 251.9 155 80.6
arahy.Tifrunner.gnm1.ann1.P847CR Arachis hypogaea HOM05D004274 ORTHO05D004980 7.5e-65 251.1 182 70.3
arahy.Tifrunner.gnm1.ann1.URW4K1 Arachis hypogaea HOM05D004274 ORTHO05D004980 7.5e-65 251.1 182 70.9
ECA247G3741 Erigeron canadensis HOM05D004274 ORTHO05D004980 7.5e-65 251.1 156 80.8
Nitab4.5_0002399g0100 Nicotiana tabacum HOM05D004274 ORTHO05D004980 7.5e-65 251.1 156 80.1
Hma1.2p1_0161F.1_g071960 Hydrangea macrophylla HOM05D004274 ORTHO05D004980 9.7e-65 250.8 157 78.3
TPR.G13822 Trifolium pratense HOM05D004274 ORTHO05D004980 1.7e-64 250.0 172 73.3
Duzib168G2323 Durio zibethinus HOM05D004274 ORTHO05D004980 2.2e-64 249.6 149 81.9
Lsat_1_v5_gn_9_15480 Lactuca sativa HOM05D004274 ORTHO05D004980 2.2e-64 249.6 154 79.2
VMungo0540G0713 Vigna mungo HOM05D004274 ORTHO05D004980 3.7e-64 248.8 179 70.9
THA.LOC104823773 Tarenaya hassleriana HOM05D004274 ORTHO05D004980 4.8e-64 248.4 151 80.8
AT5G58240 Arabidopsis thaliana HOM05D004274 ORTHO05D004980 8.2e-64 247.7 165 74.5
PGR083G2809 Punica granatum HOM05D004274 ORTHO05D004980 1.1e-63 247.3 154 79.2
Manes.02G210080 Manihot esculenta HOM05D004274 ORTHO05D004980 1.4e-63 246.9 153 79.1
Oeu023904.1 Olea europaea HOM05D004274 ORTHO05D004980 7.0e-63 244.6 176 69.9
Thecc.09G366500 Theobroma cacao HOM05D004274 ORTHO05D004980 7.0e-63 244.6 153 78.4
BcaB01g04543 Brassica carinata HOM05D004274 ORTHO05D004980 9.1e-63 244.2 158 74.7
Gohir.D10G148100 Gossypium hirsutum HOM05D004274 ORTHO05D004980 2.7e-62 242.7 212 63.2
C09p50090 Brassica napus HOM05D004274 ORTHO05D004980 4.5e-62 241.9 156 75.0
BolC9t57861H Brassica oleracea HOM05D004274 ORTHO05D004980 4.5e-62 241.9 156 75.0
BraA10t43627Z Brassica rapa HOM05D004274 ORTHO05D004980 4.5e-62 241.9 156 75.0
Lj2C1107G8 Lonicera japonica HOM05D004274 ORTHO05D004980 4.5e-62 241.9 164 73.8
Ca_15091_v3 Cicer arietinum L. HOM05D004274 ORTHO05D004980 7.7e-62 241.1 185 68.6
Thhalv10014808m.g Eutrema salsugineum HOM05D004274 ORTHO05D004980 7.7e-62 241.1 156 75.0
BcaC04g19900 Brassica carinata HOM05D004274 ORTHO05D004980 1.0e-61 240.7 156 74.4
FAN16G2313 Fragaria x ananassa HOM05D004274 ORTHO05D004980 1.0e-61 240.7 167 73.7
Gohir.A10G118575 Gossypium hirsutum HOM05D004274 ORTHO05D004980 1.0e-61 240.7 212 62.7
A10p15980 Brassica napus HOM05D004274 ORTHO05D004980 2.9e-61 239.2 152 75.7
Sp6g19900 Schrenkiella parvula HOM05D004274 ORTHO05D004980 3.8e-61 238.8 164 72.0
FAN21G2911 Fragaria x ananassa HOM05D004274 ORTHO05D004980 5.0e-61 238.4 157 77.1
HanXRQChr13g0391791 Helianthus annuus HOM05D004274 ORTHO05D004980 6.5e-61 238.0 184 68.5
Medtr3g062940 Medicago truncatula HOM05D004274 ORTHO05D004980 6.5e-61 238.0 157 76.4
PSO339G1462 Papaver somniferum HOM05D004274 ORTHO05D004980 6.5e-61 238.0 161 73.3
Cc01_g15600 Coffea canephora HOM05D004274 ORTHO05D004980 1.1e-60 237.3 179 69.8
Os11g0120600 Oryza sativa ssp. japonica HOM05D004274 ORTHO05D004980 3.2e-60 235.7 156 74.4
Carub.0008s1878 Capsella rubella HOM05D004274 ORTHO05D004980 4.2e-60 235.3 212 61.3
Rhsim01G0245500 Rhododendron simsii HOM05D004274 ORTHO05D004980 5.5e-60 235.0 179 68.7
AUR62017620 Chenopodium quinoa HOM05D004274 ORTHO05D004980 1.6e-59 233.4 168 70.8
Oeu020453.2 Olea europaea HOM05D004274 ORTHO05D004980 1.6e-59 233.4 171 69.0
AL8G34340 Arabidopsis lyrata HOM05D004274 ORTHO05D004980 2.1e-59 233.0 161 73.3
Migut.N00703 Erythranthe guttata HOM05D004274 ORTHO05D004980 2.1e-59 233.0 165 72.1
GSVIVG01024520001 Vitis vinifera HOM05D004274 ORTHO05D004980 2.1e-59 233.0 177 68.9
SEGI_00344 Sequoiadendron giganteum HOM05D004274 ORTHO05D004980 4.7e-59 231.9 157 71.3
Lj6g0024729 Lotus japonicus HOM05D004274 ORTHO05D004980 8.8e-58 227.6 153 75.2
AUR62015168 Chenopodium quinoa HOM05D004274 ORTHO05D004980 3.4e-57 225.7 171 68.4
CiPaw.13G059500 Carya illinoinensis HOM05D004274 ORTHO05D004980 1.3e-56 223.8 189 64.6
CANSAT54G0115 Cannabis sativa HOM05D004274 ORTHO05D004980 2.2e-56 223.0 159 67.9
Eucgr.D01050 Eucalyptus grandis HOM05D004274 ORTHO05D004980 2.8e-56 222.6 152 74.3
Sed0016747 Sechium edule HOM05D004274 ORTHO05D004980 2.8e-56 222.6 195 63.1
Haze_24498 Corylus avellana HOM05D004274 ORTHO05D004980 4.8e-56 221.9 152 73.0
MBI03_g31633_MAGBIO Magnolia biondii HOM05D004274 ORTHO05D004980 4.8e-56 221.9 203 60.6
Aa31LG11G30 Aethionema arabicum HOM05D004274 ORTHO05D004980 8.3e-56 221.1 177 66.1
Ciclev10006852m.g Citrus clementina HOM05D004274 ORTHO05D004980 1.4e-55 220.3 202 58.9
Sed0009740 Sechium edule HOM05D004274 ORTHO05D004980 1.4e-55 220.3 158 73.4
Psat5g146360 Pisum sativum HOM05D004274 ORTHO05D004980 3.1e-55 219.2 205 57.6
CSS0034718 Camellia sinensis var. sinensis HOM05D004274 ORTHO05D004980 3.5e-54 215.7 157 70.7
Gorai.011G165300 Gossypium raimondii HOM05D004274 ORTHO05D004980 1.0e-53 214.2 153 73.2
Cpa.g.sc84.38 Carica papaya HOM05D004274 ORTHO05D004980 2.2e-53 213.0 155 69.0
Ah.01g002020 Amaranthus hybridus HOM05D004274 ORTHO05D004980 3.8e-53 212.2 156 69.2
Psat5g146320 Pisum sativum HOM05D004274 ORTHO05D004980 5.5e-52 208.4 157 66.9
ClCG10G003560 Citrullus lanatus HOM05D004274 ORTHO05D004980 2.1e-51 206.5 158 64.6
SalBow2G3254 Salvia bowleyana HOM05D004274 ORTHO05D004980 2.1e-51 206.5 155 69.0
Sc04g0008110 Simmondsia chinensis HOM05D004274 ORTHO05D004980 2.7e-51 206.1 154 63.6
FAN11G1599 Fragaria x ananassa HOM05D004274 ORTHO05D004980 1.2e-49 200.7 154 70.1
Nn4g26698 Nelumbo nucifera HOM05D004274 ORTHO05D004980 1.5e-49 200.3 215 57.7
CBR_g39157 Chara braunii HOM05D004274 ORTHO05D004980 2.0e-49 199.9 160 61.2
Ciclev10006524m.g Citrus clementina HOM05D004274 ORTHO05D004980 2.0e-49 199.9 153 68.0
TPR.G37420 Trifolium pratense HOM05D004274 ORTHO05D004980 2.0e-49 199.9 168 61.9
Zm00001eb265500 Zea mays HOM05D004274 ORTHO05D004980 2.0e-49 199.9 167 64.1
Lsat_1_v5_gn_8_98760 Lactuca sativa HOM05D004274 ORTHO05D004980 2.6e-49 199.5 153 64.7
Aqoxy2G00658 Aquilegia oxysepala HOM05D004274 ORTHO05D004980 3.4e-49 199.1 198 59.1
CsaV3_3G000810 Cucumis sativus L. HOM05D004274 ORTHO05D004980 5.7e-49 198.4 202 55.9
CAN.G3.27 Capsicum annuum HOM05D004274 ORTHO05D004980 9.8e-49 197.6 119 79.8
Medtr3g063030 Medicago truncatula HOM05D004274 ORTHO05D004980 2.8e-48 196.1 155 64.5
EL10Ac9g22874 Beta vulgaris HOM05D004274 ORTHO05D004980 6.3e-48 194.9 121 79.3
MELO3C013768.2 Cucumis melo HOM05D004274 ORTHO05D004980 6.3e-48 194.9 211 52.6
Dinv28766 Davidia involucrata HOM05D004274 ORTHO05D004980 8.3e-48 194.5 120 81.7
TAR633G0792 Trochodendron aralioides HOM05D004274 ORTHO05D004980 8.3e-48 194.5 112 85.7
RcHm_v2.0_Chr5g0074031 Rosa chinensis HOM05D004274 ORTHO05D004980 1.1e-47 194.1 112 86.6
arahy.Tifrunner.gnm1.ann1.VY09I5 Arachis hypogaea HOM05D004274 ORTHO05D004980 1.4e-47 193.7 168 60.1
COL.COLO4_34964 Corchorus olitorius HOM05D004274 ORTHO05D004980 2.4e-47 193.0 114 86.0
Eucgr.D01049 Eucalyptus grandis HOM05D004274 ORTHO05D004980 2.4e-47 193.0 112 83.0
Potri.013G161100 Populus trichocarpa HOM05D004274 ORTHO05D004980 3.1e-47 192.6 126 76.2
Sc14g0008130 Simmondsia chinensis HOM05D004274 ORTHO05D004980 4.1e-47 192.2 113 82.3
AagrBONN_evm.TU.Sc2ySwM_228.3513 Anthoceros agrestis HOM05D004274 ORTHO05D004980 9.2e-47 191.0 166 59.6
CARHR272040 Cardamine hirsuta HOM05D004274 ORTHO05D004980 9.2e-47 191.0 119 79.0
MD03G1046300 Malus domestica HOM05D004274 ORTHO05D004980 1.2e-46 190.7 112 83.9
Lj6g0019258 Lotus japonicus HOM05D004274 ORTHO05D004980 2.0e-46 189.9 151 64.2
Os11g0120725 Oryza sativa ssp. japonica HOM05D004274 ORTHO05D004980 2.7e-46 189.5 153 62.1
vmacro14660 Vaccinium macrocarpon HOM05D004274 ORTHO05D004980 2.7e-46 189.5 113 82.3
Cre17.g698266 Chlamydomonas reinhardtii HOM05D004274 ORTHO05D004980 4.5e-46 188.7 168 57.7
Glyma.18G049000 Glycine max HOM05D004274 ORTHO05D004980 4.5e-46 188.7 153 64.7
CBR_g3497 Chara braunii HOM05D005342 ORTHO05D006925 5.9e-46 188.3 159 57.2
Medtr3g062950 Medicago truncatula HOM05D004274 ORTHO05D004980 3.8e-45 185.7 163 62.6
SMO351G0049 Selaginella moellendorffii HOM05D004274 ORTHO05D004980 3.8e-45 185.7 158 59.5
Prupe.6G037600 Prunus persica HOM05D004274 ORTHO05D004980 6.6e-45 184.9 153 64.1
HPP92_015444 Vanilla planifolia HOM05D004274 ORTHO05D004980 8.6e-45 184.5 119 76.5
Atru.chr1.1109 Acer truncatum HOM05D004274 ORTHO05D004980 1.1e-44 184.1 119 76.5
ATR0743G223 Amborella trichopoda HOM05D004274 ORTHO05D004980 1.5e-44 183.7 113 79.6
Glyma.11G201800 Glycine max HOM05D004274 ORTHO05D004980 1.5e-44 183.7 151 63.6
RcHm_v2.0_Chr5g0074041 Rosa chinensis HOM05D004274 ORTHO05D004980 1.5e-44 183.7 153 66.0
Sabra19G0129400 Salix brachista HOM05D004274 ORTHO05D004980 2.5e-44 183.0 112 80.4
SMO163G0095 Selaginella moellendorffii HOM05D004274 ORTHO05D004980 1.6e-43 180.3 174 54.6
Potri.019G133200 Populus trichocarpa HOM05D004274 ORTHO05D004980 2.1e-43 179.9 110 80.0
Atru.chr1.1108 Acer truncatum HOM05D004274 ORTHO05D004980 3.0e-42 176.0 112 78.6
CiPaw.14G047000 Carya illinoinensis HOM05D004274 ORTHO05D004980 4.0e-42 175.6 152 61.8
Sed0025842 Sechium edule HOM05D004274 ORTHO05D004980 8.9e-42 174.5 129 68.2
MD11G1049100 Malus domestica HOM05D004274 ORTHO05D004980 2.6e-41 172.9 168 56.5
TWI32G0546 Tripterygium wilfordii HOM05D004274 ORTHO05D004980 2.6e-41 172.9 151 62.9
CDE08G1523 Ceratophyllum demersum HOM05D004274 ORTHO05D004980 3.4e-41 172.6 114 75.4
PRCOL_00000589 Prasinoderma coloniale HOM05D004274 ORTHO05D004980 9.8e-41 171.0 148 58.1
Lalb_Chr15g0085541 Lupinus albus HOM05D004274 ORTHO05D004980 1.3e-40 170.6 117 68.4
MCO06G292 Micromonas commoda HOM05D004274 ORTHO05D004980 1.8e-39 166.8 156 53.8
Phvul.006G082500 Phaseolus vulgaris HOM05D004274 ORTHO05D004980 4.1e-39 165.6 151 57.6
arahy.Tifrunner.gnm1.ann1.1VUI6H Arachis hypogaea HOM05D004274 ORTHO05D004980 3.9e-37 159.1 134 61.2
FvH4_3g41230 Fragaria vesca HOM05D004274 ORTHO05D004980 1.9e-36 156.8 153 59.5
Actinidia23822 Actinidia chinensis HOM05D004274 ORTHO05D004980 7.3e-36 154.8 157 57.3
ECA236G4332 Erigeron canadensis HOM05D004274 ORTHO05D004980 9.5e-36 154.5 98 76.5
CSS0035716 Camellia sinensis var. sinensis HOM05D004274 ORTHO05D004980 2.8e-35 152.9 147 59.2
Pp3c4_3210 Physcomitrium patens HOM05D004274 ORTHO05D004980 8.9e-34 147.9 126 56.3
Hund24406 Selenicereus undatus HOM05D004274 ORTHO05D004980 4.9e-32 142.1 77 83.1
Ciclev10005970m.g Citrus clementina HOM05D004274 ORTHO05D004980 7.0e-31 138.3 134 57.5
MELO3C014026.2 Cucumis melo HOM05D004274 ORTHO05D004980 1.6e-30 137.1 110 61.8
ClCG00G000300 Citrullus lanatus HOM05D004274 ORTHO05D004980 2.5e-28 129.8 158 48.7
SGA_v2.0_scaffold8G04481 Striga asiatica HOM05D004274 ORTHO05D004980 4.7e-27 125.6 154 50.0
unitig_26.g10228 Utricularia gibba HOM05D004274 ORTHO05D004980 4.0e-26 122.5 119 58.8
QL01p023459 Quercus lobata HOM05D004274 ORTHO05D004980 8.9e-26 121.3 107 61.7
CSS0003603 Camellia sinensis var. sinensis HOM05D004274 ORTHO05D004980 1.3e-24 117.5 72 80.6
FvH4_3g41190 Fragaria vesca HOM05D004274 ORTHO05D004980 1.3e-24 117.5 100 59.0
HanXRQChr08g0231121 Helianthus annuus HOM05D004274 ORTHO05D004980 1.7e-24 117.1 84 75.0
Os12g0120400 Oryza sativa ssp. japonica HOM05D004274 ORTHO05D004980 8.3e-24 114.8 77 64.9
MBI03_g31635_MAGBIO Magnolia biondii HOM05D004274 ORTHO05D004980 1.9e-23 113.6 72 79.2
ClCG00G001760 Citrullus lanatus HOM05D004274 ORTHO05D004980 1.3e-21 107.5 88 62.5
MBI03_g31636_MAGBIO Magnolia biondii HOM05D004274 ORTHO05D004980 2.3e-21 106.7 73 74.0
EL10Ac9g22873 Beta vulgaris HOM05D007938 ORTHO05D009929 8.6e-21 104.8 150 46.0
FAN12G2850 Fragaria x ananassa HOM05D004274 ORTHO05D004980 1.9e-20 103.6 122 56.6
FvH4_4g07220 Fragaria vesca HOM05D004274 ORTHO05D004980 1.6e-19 100.5 119 54.6
Haze_26272 Corylus avellana HOM05D001787 ORTHO05D007379 2.8e-19 99.8 150 39.3
Lsat_1_v5_gn_1_8900 Lactuca sativa HOM05D004274 ORTHO05D004980 4.9e-16 89.0 62 71.0
Solyc09g018630.3 Solanum lycopersicum HOM05D004274 ORTHO05D004980 2.7e-14 83.2 47 80.9
arahy.Tifrunner.gnm1.ann1.8HSJ02 Arachis hypogaea HOM05D002696 ORTHO05D011600 1.2e-11 74.3 44 75.0
EL10Ac9g22872 Beta vulgaris HOM05D007938 ORTHO05D009929 6.2e-11 72.0 70 54.3
Dinv28765 Davidia involucrata HOM05D004274 ORTHO05D004980 1.8e-10 70.5 41 75.6
Hund24328 Selenicereus undatus HOM05D004274 ORTHO05D004980 8.9e-10 68.2 83 44.6
QL01p023462 Quercus lobata HOM05D004274 ORTHO05D004980 2.0e-09 67.0 40 72.5
Solyc09g018650.3 Solanum lycopersicum HOM05D004274 ORTHO05D004980 2.0e-09 67.0 37 78.4
Potri.019G133101 Populus trichocarpa HOM05D004274 ORTHO05D004980 5.8e-09 65.5 42 69.0
Actinidia34514 Actinidia chinensis HOM05D004274 ORTHO05D004980 7.6e-09 65.1 39 74.4
CDE08G1045 Ceratophyllum demersum HOM05D004274 ORTHO05D004980 2.9e-08 63.2 86 46.5
Os09g0246250 Oryza sativa ssp. japonica HOM05D004274 ORTHO05D004980 2.9e-08 63.2 45 57.8
HPP92_015443 Vanilla planifolia HOM05D004274 ORTHO05D004980 2.9e-08 63.2 40 70.0
MSTRG.21280 Avicennia marina HOM05D004274 ORTHO05D004980 1.1e-07 61.2 62 53.2
HanXRQChr08g0231131 Helianthus annuus HOM05D004274 ORTHO05D004980 7.1e-07 58.5 38 65.8
MSTRG.18523 Avicennia marina HOM05D004274 ORTHO05D004980 1.6e-06 57.4 42 54.8
ATR0620G116 Amborella trichopoda HOM05D004274 ORTHO05D004980 2.1e-06 57.0 40 57.5
MSTRG.12721 Avicennia marina HOM05D004274 ORTHO05D004980 2.1e-06 57.0 70 47.1
Sabra19G0129300 Salix brachista HOM05D004274 ORTHO05D004980 2.7e-06 56.6 39 69.2
MD03G1046400 Malus domestica HOM05D004274 ORTHO05D004980 3.5e-06 56.2 38 65.8


User provided reference genes

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