Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G1698 Papaver somniferum HOM05D004060 ORTHO05D004967 1.0e-119 433.7 276 100.0
PSO339G1536 Papaver somniferum HOM05D004060 ORTHO05D004967 1.1e-71 274.2 223 90.1
Nn2g15346 Nelumbo nucifera HOM05D004060 ORTHO05D004967 2.1e-43 180.3 242 48.8
Nn7g36226 Nelumbo nucifera HOM05D004060 ORTHO05D004967 7.9e-43 178.3 239 51.9
Dinv18064 Davidia involucrata HOM05D004060 ORTHO05D004967 9.7e-41 171.4 248 46.4
Lju124C36T16 Lonicera japonica HOM05D004060 ORTHO05D004967 2.8e-40 169.9 258 48.4
MBI02_g05658_MAGBIO Magnolia biondii HOM05D004060 ORTHO05D004967 1.1e-39 167.9 251 48.2
Duzib093G0278 Durio zibethinus HOM05D004060 ORTHO05D004967 5.0e-37 159.1 274 43.1
TAR369G1158 Trochodendron aralioides HOM05D004060 ORTHO05D004967 1.2e-35 154.5 226 45.6
Phvul.001G135500 Phaseolus vulgaris HOM05D004060 ORTHO05D004967 2.7e-35 153.3 244 43.0
Actinidia24529 Actinidia chinensis HOM05D004060 ORTHO05D004967 7.9e-35 151.8 233 47.2
Dinv02133 Davidia involucrata HOM05D004060 ORTHO05D004967 1.0e-34 151.4 228 46.5
CiPaw.10G032000 Carya illinoinensis HOM05D004060 ORTHO05D004967 1.4e-34 151.0 217 54.8
TAR057G0003 Trochodendron aralioides HOM05D004060 ORTHO05D004967 1.4e-34 151.0 227 44.9
Cpa.g.sc92.28 Carica papaya HOM05D004060 ORTHO05D004967 1.8e-34 150.6 256 44.9
Duzib128G1686 Durio zibethinus HOM05D004060 ORTHO05D004967 3.9e-34 149.4 260 44.6
Hma1.2p1_0696F.1_g204640 Hydrangea macrophylla HOM05D004060 ORTHO05D004967 8.8e-34 148.3 228 45.6
Cfa016842 Carpinus fangiana HOM05D004060 ORTHO05D004967 3.3e-33 146.4 232 48.7
Prupe.7G064800 Prunus persica HOM05D004060 ORTHO05D004967 7.4e-33 145.2 214 46.3
PGSC0003DMG400023721 Solanum tuberosum HOM05D004060 ORTHO05D004967 9.7e-33 144.8 209 45.9
Dinv02134 Davidia involucrata HOM05D004060 ORTHO05D004967 1.7e-32 144.1 225 44.4
Haze_19884 Corylus avellana HOM05D004060 ORTHO05D004967 3.7e-32 142.9 230 45.2
Haze_19892 Corylus avellana HOM05D004060 ORTHO05D004967 3.7e-32 142.9 230 45.2
Oeu064312.1 Olea europaea HOM05D004060 ORTHO05D004967 4.8e-32 142.5 253 43.9
Nitab4.5_0001509g0060 Nicotiana tabacum HOM05D004060 ORTHO05D004967 5.3e-31 139.0 222 44.1
Nitab4.5_0002841g0040 Nicotiana tabacum HOM05D004060 ORTHO05D004967 1.2e-30 137.9 214 44.4
HPP92_019624 Vanilla planifolia HOM05D004060 ORTHO05D004967 1.2e-30 137.9 222 40.5
CSS0022151 Camellia sinensis var. sinensis HOM05D004060 ORTHO05D004967 1.5e-30 137.5 212 46.2
Gohir.A11G312000 Gossypium hirsutum HOM05D004060 ORTHO05D004967 7.7e-30 135.2 216 46.3
Nitab4.5_0000733g0190 Nicotiana tabacum HOM05D004060 ORTHO05D004967 1.0e-29 134.8 210 46.7
Actinidia09345 Actinidia chinensis HOM05D004060 ORTHO05D004967 2.2e-29 133.7 230 46.1
CAN.G128.15 Capsicum annuum HOM05D004060 ORTHO05D004967 2.9e-29 133.3 207 53.6
Rhsim03G0018200 Rhododendron simsii HOM05D004060 ORTHO05D004967 5.0e-29 132.5 223 45.3
RcHm_v2.0_Chr3g0481501 Rosa chinensis HOM05D004060 ORTHO05D004967 5.0e-29 132.5 218 49.1
Nitab4.5_0001663g0020 Nicotiana tabacum HOM05D004060 ORTHO05D004967 6.5e-29 132.1 210 47.1
FAN02G3665 Fragaria x ananassa HOM05D004060 ORTHO05D004967 1.1e-28 131.3 218 43.6
Glyma.03G138100 Glycine max HOM05D004060 ORTHO05D004967 1.1e-28 131.3 251 42.2
FAN09G1680 Fragaria x ananassa HOM05D004060 ORTHO05D004967 2.5e-28 130.2 218 43.1
Gohir.D11G328600 Gossypium hirsutum HOM05D004060 ORTHO05D004967 2.5e-28 130.2 237 46.8
Gorai.007G359900 Gossypium raimondii HOM05D004060 ORTHO05D004967 2.5e-28 130.2 237 46.8
vmacro22363 Vaccinium macrocarpon HOM05D004060 ORTHO05D004967 2.5e-28 130.2 208 46.6
QL07p021067 Quercus lobata HOM05D004060 ORTHO05D004967 4.2e-28 129.4 224 44.2
DCAR_013590 Daucus carota HOM05D004060 ORTHO05D004967 7.2e-28 128.6 204 52.5
Aqoxy1G00285 Aquilegia oxysepala HOM05D004060 ORTHO05D004967 9.4e-28 128.3 226 42.9
MD14G1069500 Malus domestica HOM05D004060 ORTHO05D004967 9.4e-28 128.3 221 43.9
Oeu033785.1 Olea europaea HOM05D004060 ORTHO05D004967 9.4e-28 128.3 227 41.9
FvH4_6g23510 Fragaria vesca HOM05D004060 ORTHO05D004967 1.2e-27 127.9 218 42.7
FAN14G3078 Fragaria x ananassa HOM05D004060 ORTHO05D004967 1.2e-27 127.9 218 42.7
Peaxi162Scf00493g00316 Petunia axillaris HOM05D004060 ORTHO05D004967 2.1e-27 127.1 181 52.5
Sopen10g030840 Solanum pennellii HOM05D004060 ORTHO05D004967 3.6e-27 126.3 206 44.2
Ciclev10005594m.g Citrus clementina HOM05D004060 ORTHO05D004967 4.7e-27 125.9 238 41.6
FAN05G0004 Fragaria x ananassa HOM05D004060 ORTHO05D004967 4.7e-27 125.9 218 43.6
Gohir.A11G312100 Gossypium hirsutum HOM05D004060 ORTHO05D004967 4.7e-27 125.9 240 45.4
Oeu017953.1 Olea europaea HOM05D004060 ORTHO05D004967 8.0e-27 125.2 250 44.0
MBI04_g36073_MAGBIO Magnolia biondii HOM05D004060 ORTHO05D004967 1.8e-26 124.0 225 38.2
Potri.016G054400 Populus trichocarpa HOM05D004060 ORTHO05D004967 1.8e-26 124.0 221 43.0
Lsat_1_v5_gn_5_162320 Lactuca sativa HOM05D004060 ORTHO05D004967 3.0e-26 123.2 223 42.6
Duzib106G1229 Durio zibethinus HOM05D004060 ORTHO05D004967 6.7e-26 122.1 226 43.4
Solyc10g080230.2 Solanum lycopersicum HOM05D004060 ORTHO05D004967 2.0e-25 120.6 180 47.8
Thecc.05G159200 Theobroma cacao HOM05D004060 ORTHO05D004967 2.6e-25 120.2 234 42.7
COL.COLO4_28207 Corchorus olitorius HOM05D004060 ORTHO05D004967 4.4e-25 119.4 242 44.6
Peaxi162Scf01287g00012 Petunia axillaris HOM05D004060 ORTHO05D004967 4.4e-25 119.4 192 46.9
ECA248G2911 Erigeron canadensis HOM05D004060 ORTHO05D004967 5.7e-25 119.0 218 45.9
Cc06_g16910 Coffea canephora HOM05D004060 ORTHO05D004967 7.4e-25 118.6 230 40.4
PGR004G1680 Punica granatum HOM05D004060 ORTHO05D004967 9.7e-25 118.2 232 42.2
Atru.chr1.1058 Acer truncatum HOM05D004060 ORTHO05D004967 1.3e-24 117.9 243 40.7
Lj2C380T14 Lonicera japonica HOM05D004060 ORTHO05D004967 1.7e-24 117.5 186 47.3
Potri.006G053200 Populus trichocarpa HOM05D004060 ORTHO05D004967 1.7e-24 117.5 226 44.7
CARHR136960 Cardamine hirsuta HOM05D004060 ORTHO05D004967 3.7e-24 116.3 232 38.4
Ca_08471_v3 Cicer arietinum L. HOM05D004060 ORTHO05D004967 3.7e-24 116.3 241 38.2
SGA_v2.0_scaffold69G23102 Striga asiatica HOM05D004060 ORTHO05D004967 6.3e-24 115.5 261 37.5
C04p03110 Brassica napus HOM05D004060 ORTHO05D004967 1.1e-23 114.8 250 36.8
BolC4t21952H Brassica oleracea HOM05D004060 ORTHO05D004967 1.1e-23 114.8 250 36.8
MSTRG.6438 Avicennia marina HOM05D004060 ORTHO05D004967 1.4e-23 114.4 213 42.3
VMungo1383G2713 Vigna mungo HOM05D004060 ORTHO05D004967 1.4e-23 114.4 220 39.5
ClCG10G016620 Citrullus lanatus HOM05D004060 ORTHO05D004967 1.8e-23 114.0 218 41.7
TWI53G1485 Tripterygium wilfordii HOM05D004060 ORTHO05D004967 4.1e-23 112.8 215 40.5
CANSAT80G2886 Cannabis sativa HOM05D004060 ORTHO05D004967 1.2e-22 111.3 219 50.7
FAN05G5649 Fragaria x ananassa HOM05D004060 ORTHO05D004967 1.6e-22 110.9 209 40.7
Manes.09G024700 Manihot esculenta HOM05D004060 ORTHO05D004967 2.0e-22 110.5 210 47.1
TAR633G1984 Trochodendron aralioides HOM05D004060 ORTHO05D004967 2.0e-22 110.5 228 36.4
CsaV3_3G039720 Cucumis sativus L. HOM05D004060 ORTHO05D004967 2.6e-22 110.2 234 38.5
MSTRG.10823 Avicennia marina HOM05D004060 ORTHO05D004967 3.5e-22 109.8 229 42.4
HanXRQChr01g0008631 Helianthus annuus HOM05D004060 ORTHO05D004967 3.5e-22 109.8 207 44.4
arahy.Tifrunner.gnm1.ann1.L89JBM Arachis hypogaea HOM05D004060 ORTHO05D004967 4.5e-22 109.4 228 43.0
Migut.J01771 Erythranthe guttata HOM05D004060 ORTHO05D004967 4.5e-22 109.4 202 45.5
Sabra06G0037600 Salix brachista HOM05D004060 ORTHO05D004967 4.5e-22 109.4 207 42.0
SalBow6G3128 Salvia bowleyana HOM05D004060 ORTHO05D004967 7.7e-22 108.6 224 39.7
Zm00001eb061820 Zea mays HOM05D004060 ORTHO05D004967 7.7e-22 108.6 228 34.2
MELO3C009714.2 Cucumis melo HOM05D004060 ORTHO05D004967 1.3e-21 107.8 233 37.8
Zm00001eb107230 Zea mays HOM05D004060 ORTHO05D004967 1.7e-21 107.5 234 34.2
CARHR167760 Cardamine hirsuta HOM05D004060 ORTHO05D004967 2.2e-21 107.1 227 37.0
Hma1.2p1_0247F.1_g101840 Hydrangea macrophylla HOM05D004060 ORTHO05D004967 2.9e-21 106.7 226 39.8
Manes.08G049300 Manihot esculenta HOM05D004060 ORTHO05D004967 5.0e-21 105.9 209 40.7
TWI74G0684 Tripterygium wilfordii HOM05D004060 ORTHO05D004967 5.0e-21 105.9 219 39.3
Eucgr.A02379 Eucalyptus grandis HOM05D004060 ORTHO05D004967 6.5e-21 105.5 211 42.7
DCAR_020477 Daucus carota HOM05D004060 ORTHO05D004967 1.9e-20 104.0 223 36.8
BraA05t19254Z Brassica rapa HOM05D004060 ORTHO05D004967 3.2e-20 103.2 239 36.0
Sed0004660 Sechium edule HOM05D004060 ORTHO05D004967 3.2e-20 103.2 230 41.7
Lalb_Chr25g0287361 Lupinus albus HOM05D004060 ORTHO05D004967 4.2e-20 102.8 226 42.0
TWI77G1037 Tripterygium wilfordii HOM05D004060 ORTHO05D004967 4.2e-20 102.8 209 40.7
A05p02610 Brassica napus HOM05D004060 ORTHO05D004967 5.5e-20 102.4 239 36.0
TPR.G21399 Trifolium pratense HOM05D004060 ORTHO05D004967 5.5e-20 102.4 224 36.6
Medtr1g052560 Medicago truncatula HOM05D004060 ORTHO05D004967 9.4e-20 101.7 225 36.0
Medtr7g091990 Medicago truncatula HOM05D004060 ORTHO05D004967 1.2e-19 101.3 220 40.0
EL10Ac3g07036 Beta vulgaris HOM05D004060 ORTHO05D004967 1.6e-19 100.9 226 51.8
Solyc04g015520.3 Solanum lycopersicum HOM05D004060 ORTHO05D004967 1.6e-19 100.9 223 42.2
AT3G57540 Arabidopsis thaliana HOM05D004060 ORTHO05D004967 2.7e-19 100.1 243 33.3
Sc13g0001870 Simmondsia chinensis HOM05D004060 ORTHO05D004967 2.7e-19 100.1 209 39.2
HanXRQChr10g0300071 Helianthus annuus HOM05D004060 ORTHO05D004967 4.7e-19 99.4 206 39.3
arahy.Tifrunner.gnm1.ann1.N3K66E Arachis hypogaea HOM05D003004 ORTHO05D004967 8.0e-19 98.6 68 67.6
MSTRG.19874 Avicennia marina HOM05D004060 ORTHO05D004967 8.0e-19 98.6 224 37.1
TPR.G3730 Trifolium pratense HOM05D004060 ORTHO05D004967 8.0e-19 98.6 214 41.6
AL5G39120 Arabidopsis lyrata HOM05D004060 ORTHO05D004967 1.0e-18 98.2 238 32.8
Lalb_Chr20g0110781 Lupinus albus HOM05D004060 ORTHO05D004967 1.0e-18 98.2 220 43.2
BcaNung07195 Brassica carinata HOM05D004060 ORTHO05D004967 1.4e-18 97.8 238 35.7
Carub.0005s2438 Capsella rubella HOM05D004060 ORTHO05D004967 1.4e-18 97.8 236 34.7
Phvul.007G253600 Phaseolus vulgaris HOM05D004060 ORTHO05D004967 6.7e-18 95.5 223 36.8
ATR0332G033 Amborella trichopoda HOM05D004060 ORTHO05D004967 8.8e-18 95.1 220 36.4
Os07g0569100 Oryza sativa ssp. japonica HOM05D004060 ORTHO05D004967 8.8e-18 95.1 214 34.1
BcaC07g40371 Brassica carinata HOM05D004060 ORTHO05D004967 3.3e-17 93.2 231 34.6
C08p33070 Brassica napus HOM05D004060 ORTHO05D004967 3.3e-17 93.2 231 34.6
BolC8t50907H Brassica oleracea HOM05D004060 ORTHO05D004967 3.3e-17 93.2 231 34.6
Ca_26888_v3 Cicer arietinum L. HOM05D004060 ORTHO05D004967 3.3e-17 93.2 246 34.1
Carub.0004s2418 Capsella rubella HOM05D004060 ORTHO05D004967 4.4e-17 92.8 234 38.5
Glyma.19G141100 Glycine max HOM05D004060 ORTHO05D004967 4.4e-17 92.8 222 38.3
CiPaw.09G036400 Carya illinoinensis HOM05D004060 ORTHO05D004967 5.7e-17 92.4 168 39.9
Thhalv10017761m.g Eutrema salsugineum HOM05D004060 ORTHO05D004967 5.7e-17 92.4 218 36.2
Sopen04g007590 Solanum pennellii HOM05D004060 ORTHO05D004967 5.7e-17 92.4 225 41.8
PGSC0003DMG400027238 Solanum tuberosum HOM05D004060 ORTHO05D004967 9.7e-17 91.7 235 40.0
Lj1g0010539 Lotus japonicus HOM05D004060 ORTHO05D004967 1.3e-16 91.3 215 48.8
Lsat_1_v5_gn_9_27220 Lactuca sativa HOM05D004060 ORTHO05D004967 1.7e-16 90.9 215 47.9
arahy.Tifrunner.gnm1.ann1.AM9K84 Arachis hypogaea HOM05D004060 ORTHO05D004967 2.2e-16 90.5 225 45.8
Sp4g24140 Schrenkiella parvula HOM05D004060 ORTHO05D004967 2.8e-16 90.1 228 39.5
THA.LOC104824453 Tarenaya hassleriana HOM05D004060 ORTHO05D004967 2.8e-16 90.1 222 39.2
A09p50400 Brassica napus HOM05D004060 ORTHO05D004967 6.3e-16 89.0 218 37.2
AL4G40200 Arabidopsis lyrata HOM05D004060 ORTHO05D004967 8.3e-16 88.6 245 33.9
BraA09t40492Z Brassica rapa HOM05D004060 ORTHO05D004967 8.3e-16 88.6 219 35.2
Psat3g079320 Pisum sativum HOM05D004060 ORTHO05D004967 1.8e-15 87.4 217 34.1
ECA247G2970 Erigeron canadensis HOM05D004060 ORTHO05D004967 2.4e-15 87.0 181 40.3
Sp5g05050 Schrenkiella parvula HOM05D004060 ORTHO05D004967 3.1e-15 86.7 222 31.5
MD12G1072300 Malus domestica HOM05D004060 ORTHO05D004967 4.1e-15 86.3 235 34.0
AT2G41870 Arabidopsis thaliana HOM05D004060 ORTHO05D004967 5.3e-15 85.9 230 37.0
arahy.Tifrunner.gnm1.ann1.3TR3AL Arachis hypogaea HOM05D002100 ORTHO05D002310 5.3e-15 85.9 60 66.7
Aa31LG10G12370 Aethionema arabicum HOM05D004060 ORTHO05D004967 2.7e-14 83.6 219 33.8
Hund24724 Selenicereus undatus HOM05D004060 ORTHO05D004967 4.5e-14 82.8 254 31.5
Thhalv10006130m.g Eutrema salsugineum HOM05D004060 ORTHO05D004967 7.7e-14 82.0 209 34.9
arahy.Tifrunner.gnm1.ann1.GL61MB Arachis hypogaea HOM05D004060 ORTHO05D004967 1.0e-13 81.6 179 44.7
Zm00001eb324720 Zea mays HOM05D004060 ORTHO05D004967 2.9e-13 80.1 218 33.0
Os03g0808300 Oryza sativa ssp. japonica HOM05D004060 ORTHO05D004967 3.8e-13 79.7 206 32.5
VMungo0720G0143 Vigna mungo HOM05D004060 ORTHO05D004967 5.0e-13 79.3 217 42.4
HanXRQChr10g0300061 Helianthus annuus HOM05D004060 ORTHO05D004967 1.1e-12 78.2 62 59.7
BcaC07g40387 Brassica carinata HOM05D004060 ORTHO05D004967 1.5e-12 77.8 218 34.9
ECA247G3737 Erigeron canadensis HOM05D003799 ORTHO05D001964 2.5e-12 77.0 61 60.7
SalBow1G5147 Salvia bowleyana HOM05D004060 ORTHO05D004967 2.7e-11 73.6 225 32.4
CAN.G676.50 Capsicum annuum HOM05D004060 ORTHO05D004967 1.2e-09 68.2 213 39.0
BcaB02g07595 Brassica carinata HOM05D004060 ORTHO05D004967 2.0e-09 67.4 206 31.1
Ca_29692_v3 Cicer arietinum L. HOM05D004060 ORTHO05D004967 2.6e-09 67.0 39 74.4
Glyma.02G182600 Glycine max HOM05D004060 ORTHO05D004967 5.7e-09 65.9 230 37.4
Glyma.10G099400 Glycine max HOM05D004060 ORTHO05D004967 6.3e-08 62.4 38 73.7
Os07g0208600 Oryza sativa ssp. japonica HOM05D004060 ORTHO05D004967 7.0e-07 58.9 207 30.4
arahy.Tifrunner.gnm1.ann1.49FMRE Arachis hypogaea HOM05D004060 ORTHO05D004967 1.2e-06 58.2 160 40.0
HanXRQChr05g0132091 Helianthus annuus HOM05D004060 ORTHO05D004967 5.9e-06 55.8 39 66.7


User provided reference genes

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