Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G1281 Papaver somniferum HOM05D004188 ORTHO05D004445 8.4e-58 227.3 156 100.0
PSO339G1636 Papaver somniferum HOM05D004188 ORTHO05D004445 4.5e-43 178.3 157 80.3
MELO3C025771.2 Cucumis melo HOM05D004188 ORTHO05D004445 2.9e-10 69.3 62 54.8
FAN16G2082 Fragaria x ananassa HOM05D004188 ORTHO05D004445 8.5e-10 67.8 40 77.5
FAN21G0748 Fragaria x ananassa HOM05D004188 ORTHO05D004445 8.5e-10 67.8 40 77.5
CsaV3_6G013900 Cucumis sativus L. HOM05D004188 ORTHO05D004445 3.2e-09 65.9 62 51.6
Sabra09G0008000 Salix brachista HOM05D004188 ORTHO05D004445 4.2e-09 65.5 43 69.8
FvH4_3g32420 Fragaria vesca HOM05D004188 ORTHO05D004445 5.5e-09 65.1 40 75.0
FAN11G3469 Fragaria x ananassa HOM05D004188 ORTHO05D004445 5.5e-09 65.1 40 75.0
Prupe.6G101100 Prunus persica HOM05D004188 ORTHO05D004445 5.5e-09 65.1 40 70.0
ClCG02G021140 Citrullus lanatus HOM05D004188 ORTHO05D004445 9.4e-09 64.3 41 70.7
Potri.009G013500 Populus trichocarpa HOM05D004188 ORTHO05D004445 9.4e-09 64.3 40 72.5
FAN25G0660 Fragaria x ananassa HOM05D004188 ORTHO05D004445 1.6e-08 63.5 117 44.4
arahy.Tifrunner.gnm1.ann1.70MDEI Arachis hypogaea HOM05D004188 ORTHO05D004445 2.7e-08 62.8 41 68.3
arahy.Tifrunner.gnm1.ann1.P4NYDW Arachis hypogaea HOM05D004188 ORTHO05D004445 2.7e-08 62.8 41 68.3
Prupe.2G214100 Prunus persica HOM05D004188 ORTHO05D004445 2.7e-08 62.8 41 68.3
arahy.Tifrunner.gnm1.ann1.H0Z3H2 Arachis hypogaea HOM05D004188 ORTHO05D004445 3.6e-08 62.4 41 65.9
CiPaw.13G112700 Carya illinoinensis HOM05D004188 ORTHO05D004445 4.7e-08 62.0 133 36.8
Sabra04G0141900 Salix brachista HOM05D004188 ORTHO05D004445 4.7e-08 62.0 40 72.5
Cfa011320 Carpinus fangiana HOM05D004188 ORTHO05D004445 6.1e-08 61.6 61 50.8
Gohir.D05G102200 Gossypium hirsutum HOM05D004188 ORTHO05D004445 6.1e-08 61.6 149 39.6
THA.LOC104799503 Tarenaya hassleriana HOM05D004188 ORTHO05D004445 6.1e-08 61.6 40 72.5
CANSAT54G2412 Cannabis sativa HOM05D004188 ORTHO05D004445 8.0e-08 61.2 40 67.5
Duzib170G0015 Durio zibethinus HOM05D004188 ORTHO05D004445 8.0e-08 61.2 152 36.8
RcHm_v2.0_Chr5g0059401 Rosa chinensis HOM05D004188 ORTHO05D004445 8.0e-08 61.2 40 70.0
CiPaw.14G080400 Carya illinoinensis HOM05D004188 ORTHO05D004445 1.0e-07 60.8 39 74.4
Duzib168G0960 Durio zibethinus HOM05D004188 ORTHO05D004445 1.0e-07 60.8 166 39.8
Gohir.A03G034200 Gossypium hirsutum HOM05D004188 ORTHO05D004445 1.0e-07 60.8 127 44.1
Gohir.D03G134100 Gossypium hirsutum HOM05D004188 ORTHO05D004445 1.0e-07 60.8 132 43.2
Sed0015663 Sechium edule HOM05D004188 ORTHO05D004445 1.8e-07 60.1 40 67.5
Solyc06g016790.3 Solanum lycopersicum HOM05D004188 ORTHO05D004445 1.8e-07 60.1 167 32.3
Gorai.003G141200 Gossypium raimondii HOM05D004188 ORTHO05D004445 2.3e-07 59.7 132 42.4
Dinv31327 Davidia involucrata HOM05D001979 ORTHO05D001961 3.0e-07 59.3 40 65.0
MBI07_g19312_MAGBIO Magnolia biondii HOM05D004188 ORTHO05D004445 5.2e-07 58.5 160 35.6
CARHR150740 Cardamine hirsuta HOM05D004188 ORTHO05D004445 6.7e-07 58.2 40 65.0
Lj2g0024305 Lotus japonicus HOM05D004188 ORTHO05D004445 8.8e-07 57.8 41 61.0
Sc06g0010170 Simmondsia chinensis HOM05D004188 ORTHO05D004445 8.8e-07 57.8 39 66.7
MSTRG.21125 Avicennia marina HOM05D004188 ORTHO05D004445 1.2e-06 57.4 42 59.5
Cc01_g11150 Coffea canephora HOM05D004188 ORTHO05D004445 1.5e-06 57.0 40 62.5
Peaxi162Scf00270g00089 Petunia axillaris HOM05D004188 ORTHO05D004445 1.5e-06 57.0 38 65.8
HPP92_005145 Vanilla planifolia HOM05D053319 ORTHO05D004445 1.5e-06 57.0 37 70.3
MBI10_g41700_MAGBIO Magnolia biondii HOM05D004188 ORTHO05D004445 2.0e-06 56.6 40 60.0
Potri.004G210300 Populus trichocarpa HOM05D004188 ORTHO05D004445 2.0e-06 56.6 40 67.5
PGSC0003DMG400029164 Solanum tuberosum HOM05D004188 ORTHO05D004445 2.0e-06 56.6 157 40.1
Actinidia03061 Actinidia chinensis HOM05D004188 ORTHO05D004445 2.6e-06 56.2 41 63.4
A06p21540 Brassica napus HOM05D004188 ORTHO05D004445 2.6e-06 56.2 132 38.6
Lsat_1_v5_gn_1_65340 Lactuca sativa HOM05D004188 ORTHO05D004445 2.6e-06 56.2 128 46.1
Sopen11g028110 Solanum pennellii HOM05D004188 ORTHO05D004445 2.6e-06 56.2 167 32.9
Glyma.11G146900 Glycine max HOM05D004188 ORTHO05D004445 3.3e-06 55.8 40 65.0
Glyma.12G067800 Glycine max HOM05D004188 ORTHO05D004445 3.3e-06 55.8 40 65.0
Nitab4.5_0000650g0240 Nicotiana tabacum HOM05D004188 ORTHO05D004445 3.3e-06 55.8 40 60.0
MELO3C026856.2 Cucumis melo HOM05D004188 ORTHO05D004445 4.4e-06 55.5 40 60.0
Gorai.009G106500 Gossypium raimondii HOM05D004188 ORTHO05D004445 4.4e-06 55.5 147 45.6
Psat7g224760 Pisum sativum HOM05D004188 ORTHO05D004445 4.4e-06 55.5 40 62.5
VMungo1127G1131 Vigna mungo HOM05D000847 ORTHO05D003278 5.7e-06 55.1 40 62.5
Actinidia24099 Actinidia chinensis HOM05D004188 ORTHO05D004445 7.5e-06 54.7 40 60.0
Thhalv10002916m.g Eutrema salsugineum HOM05D004188 ORTHO05D004445 7.5e-06 54.7 40 57.5
Manes.11G144800 Manihot esculenta HOM05D004188 ORTHO05D004445 9.7e-06 54.3 61 42.6
Oeu001268.1 Olea europaea HOM05D004188 ORTHO05D004445 9.7e-06 54.3 40 60.0


User provided reference genes

Program Settings