Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G1073 Papaver somniferum HOM05D002306 ORTHO05D005773 1.9e-234 815.5 402 100.0
PSO135G0144 Papaver somniferum HOM05D002306 ORTHO05D005773 1.6e-230 802.4 403 99.0
Nn3g18949 Nelumbo nucifera HOM05D002306 ORTHO05D005773 1.7e-166 589.7 407 70.8
Aqoxy6G02068 Aquilegia oxysepala HOM05D002306 ORTHO05D005773 1.6e-161 573.2 412 69.4
Nn1g00292 Nelumbo nucifera HOM05D002306 ORTHO05D005773 1.8e-160 569.7 409 68.9
MBI06_g46366_MAGBIO Magnolia biondii HOM05D002306 ORTHO05D005773 2.5e-154 549.3 413 66.6
GSVIVG01038567001 Vitis vinifera HOM05D002306 ORTHO05D005773 5.5e-154 548.1 407 67.3
MD07G1293200 Malus domestica HOM05D002306 ORTHO05D005773 4.7e-153 545.0 409 65.8
Dinv29264 Davidia involucrata HOM05D002306 ORTHO05D005773 6.1e-153 544.7 405 65.9
CANSAT21G2187 Cannabis sativa HOM05D002306 ORTHO05D005773 4.0e-152 542.0 405 65.9
CiPaw.06G045200 Carya illinoinensis HOM05D002306 ORTHO05D005773 6.8e-152 541.2 407 65.6
Prupe.2G313000 Prunus persica HOM05D002306 ORTHO05D005773 6.8e-152 541.2 388 67.8
QL09p008623 Quercus lobata HOM05D002306 ORTHO05D005773 6.8e-152 541.2 419 64.0
Manes.01G185000 Manihot esculenta HOM05D002306 ORTHO05D005773 8.8e-152 540.8 406 66.3
Duzib084G0543 Durio zibethinus HOM05D002306 ORTHO05D005773 5.7e-151 538.1 405 65.9
Cfa016243 Carpinus fangiana HOM05D002306 ORTHO05D005773 6.3e-150 534.6 407 65.8
PGR142G2770 Punica granatum HOM05D002306 ORTHO05D005773 1.1e-149 533.9 398 64.8
Duzib205G1406 Durio zibethinus HOM05D002306 ORTHO05D005773 1.8e-149 533.1 405 65.9
TWI39G0548 Tripterygium wilfordii HOM05D002306 ORTHO05D005773 1.7e-147 526.6 408 64.5
CSS0036676 Camellia sinensis var. sinensis HOM05D002306 ORTHO05D005773 2.3e-147 526.2 405 64.4
MD01G1222600 Malus domestica HOM05D002306 ORTHO05D005773 2.3e-147 526.2 410 64.6
Thecc.03G200900 Theobroma cacao HOM05D002306 ORTHO05D005773 3.8e-147 525.4 410 63.9
Eucgr.K00394 Eucalyptus grandis HOM05D002306 ORTHO05D005773 5.0e-147 525.0 399 64.4
RcHm_v2.0_Chr1g0381481 Rosa chinensis HOM05D002306 ORTHO05D005773 8.6e-147 524.2 384 66.7
Phvul.001G075000 Phaseolus vulgaris HOM05D002306 ORTHO05D005773 1.9e-146 523.1 393 63.4
Potri.012G017100 Populus trichocarpa HOM05D002306 ORTHO05D005773 1.9e-146 523.1 392 65.8
Glyma.19G065800 Glycine max HOM05D002306 ORTHO05D005773 7.3e-146 521.2 392 64.3
FAN06G4818 Fragaria x ananassa HOM05D002306 ORTHO05D005773 9.5e-146 520.8 401 63.8
EL10Ac3g05271 Beta vulgaris HOM05D002306 ORTHO05D005773 1.6e-145 520.0 403 63.5
Lalb_Chr01g0013731 Lupinus albus HOM05D002306 ORTHO05D005773 1.6e-145 520.0 396 63.4
FAN01G0065 Fragaria x ananassa HOM05D002306 ORTHO05D005773 2.1e-145 519.6 401 63.8
Hund11654 Selenicereus undatus HOM05D002306 ORTHO05D005773 3.6e-145 518.8 398 62.6
Glyma.14G162400 Glycine max HOM05D002306 ORTHO05D005773 6.1e-145 518.1 400 63.5
CsaV3_5G000460 Cucumis sativus L. HOM05D002306 ORTHO05D005773 1.0e-144 517.3 389 65.3
FAN03G1878 Fragaria x ananassa HOM05D002306 ORTHO05D005773 1.4e-144 516.9 403 63.8
Haze_00198 Corylus avellana HOM05D002306 ORTHO05D005773 1.8e-144 516.5 395 65.8
VMungo0647G1725 Vigna mungo HOM05D002306 ORTHO05D005773 1.8e-144 516.5 410 61.5
FvH4_7g31980 Fragaria vesca HOM05D002306 ORTHO05D005773 2.3e-144 516.2 401 63.3
ClCG01G000390 Citrullus lanatus HOM05D002306 ORTHO05D005773 3.0e-144 515.8 389 65.3
Gorai.008G267900 Gossypium raimondii HOM05D002306 ORTHO05D005773 6.8e-144 514.6 408 62.7
DCAR_020335 Daucus carota HOM05D002306 ORTHO05D005773 8.9e-144 514.2 409 62.1
FAN10G2791 Fragaria x ananassa HOM05D002306 ORTHO05D005773 8.9e-144 514.2 429 60.1
Medtr1g007860 Medicago truncatula HOM05D002306 ORTHO05D005773 1.2e-143 513.8 392 63.3
Nitab4.5_0005491g0070 Nicotiana tabacum HOM05D002306 ORTHO05D005773 2.0e-143 513.1 406 64.0
Gohir.D12G249800 Gossypium hirsutum HOM05D002306 ORTHO05D005773 2.6e-143 512.7 408 62.3
Ca_12784_v3 Cicer arietinum L. HOM05D002306 ORTHO05D005773 3.4e-143 512.3 415 61.7
Ca_12788_v3 Cicer arietinum L. HOM05D002306 ORTHO05D005773 3.4e-143 512.3 415 61.7
MELO3C005890.2 Cucumis melo HOM05D002306 ORTHO05D005773 4.4e-143 511.9 389 65.0
Potri.015G011300 Populus trichocarpa HOM05D002306 ORTHO05D005773 4.4e-143 511.9 386 66.3
Ciclev10020415m.g Citrus clementina HOM05D002306 ORTHO05D005773 7.5e-143 511.1 410 62.7
FAN10G0091 Fragaria x ananassa HOM05D002306 ORTHO05D005773 9.8e-143 510.8 430 60.5
Manes.05G190400 Manihot esculenta HOM05D002306 ORTHO05D005773 9.8e-143 510.8 347 70.9
Gohir.A12G249000 Gossypium hirsutum HOM05D002306 ORTHO05D005773 1.3e-142 510.4 408 62.5
Nitab4.5_0000548g0060 Nicotiana tabacum HOM05D002306 ORTHO05D005773 1.3e-142 510.4 406 62.8
arahy.Tifrunner.gnm1.ann1.FPLI9C Arachis hypogaea HOM05D002306 ORTHO05D005773 2.9e-142 509.2 396 62.6
Sed0011455 Sechium edule HOM05D002306 ORTHO05D005773 3.7e-142 508.8 398 62.1
Rhsim09G0206400 Rhododendron simsii HOM05D002306 ORTHO05D005773 4.9e-142 508.4 386 65.3
Actinidia06142 Actinidia chinensis HOM05D002306 ORTHO05D005773 6.4e-142 508.1 390 64.6
vmacro10129 Vaccinium macrocarpon HOM05D002306 ORTHO05D005773 6.4e-142 508.1 386 64.5
Migut.F00200 Erythranthe guttata HOM05D002306 ORTHO05D005773 8.3e-142 507.7 408 62.5
Cc02_g01380 Coffea canephora HOM05D002306 ORTHO05D005773 1.1e-141 507.3 405 62.2
arahy.Tifrunner.gnm1.ann1.4T5RFS Arachis hypogaea HOM05D002306 ORTHO05D005773 2.4e-141 506.1 396 62.4
CAN.G481.26 Capsicum annuum HOM05D002306 ORTHO05D005773 2.4e-141 506.1 405 62.7
PGSC0003DMG401018530 Solanum tuberosum HOM05D002306 ORTHO05D005773 2.4e-141 506.1 406 63.3
THA.LOC104799971 Tarenaya hassleriana HOM05D002306 ORTHO05D005773 3.2e-141 505.8 408 61.3
CDE04G0267 Ceratophyllum demersum HOM05D002306 ORTHO05D005773 5.4e-141 505.0 382 65.4
Peaxi162Scf00740g00143 Petunia axillaris HOM05D002306 ORTHO05D005773 9.2e-141 504.2 407 62.7
CiPaw.05G198100 Carya illinoinensis HOM05D002306 ORTHO05D005773 3.5e-140 502.3 345 70.4
Solyc03g083010.3 Solanum lycopersicum HOM05D002306 ORTHO05D005773 7.8e-140 501.1 405 62.2
Sopen03g022820 Solanum pennellii HOM05D002306 ORTHO05D005773 1.3e-139 500.4 405 62.0
Cpa.g.sc3.100 Carica papaya HOM05D002306 ORTHO05D005773 1.7e-139 500.0 367 66.2
Oeu037052.1 Olea europaea HOM05D002306 ORTHO05D005773 2.3e-139 499.6 408 61.8
SalBow4G3229 Salvia bowleyana HOM05D002306 ORTHO05D005773 1.5e-138 496.9 420 61.2
CARHR266070 Cardamine hirsuta HOM05D002306 ORTHO05D005773 1.9e-138 496.5 408 60.5
Carub.0008s1325 Capsella rubella HOM05D002306 ORTHO05D005773 2.5e-138 496.1 405 60.0
Lj1g0011159 Lotus japonicus HOM05D002306 ORTHO05D005773 3.3e-138 495.7 392 62.5
Hund21009 Selenicereus undatus HOM05D002306 ORTHO05D005773 5.6e-138 495.0 340 69.4
Atru.chr12.2238 Acer truncatum HOM05D002306 ORTHO05D005773 1.2e-137 493.8 340 67.9
Thhalv10013609m.g Eutrema salsugineum HOM05D002306 ORTHO05D005773 1.2e-137 493.8 405 60.2
A03p15450 Brassica napus HOM05D002306 ORTHO05D005773 2.8e-137 492.7 408 59.8
Ah.13g070360 Amaranthus hybridus HOM05D002306 ORTHO05D005773 3.6e-137 492.3 339 69.3
BraA03t10835Z Brassica rapa HOM05D002306 ORTHO05D005773 3.6e-137 492.3 408 59.8
AT5G53050 Arabidopsis thaliana HOM05D002306 ORTHO05D005773 4.7e-137 491.9 405 61.2
BcaB01g04217 Brassica carinata HOM05D002306 ORTHO05D005773 1.0e-136 490.7 387 61.8
Os05g0542200 Oryza sativa ssp. japonica HOM05D002306 ORTHO05D005773 1.0e-136 490.7 412 60.0
A03p15420 Brassica napus HOM05D002306 ORTHO05D005773 2.3e-136 489.6 407 59.2
Aa31LG3G9420 Aethionema arabicum HOM05D002306 ORTHO05D005773 4.0e-136 488.8 446 56.7
Sc13g0009860 Simmondsia chinensis HOM05D002306 ORTHO05D005773 5.2e-136 488.4 335 69.9
Sabra15G0009300 Salix brachista HOM05D002306 ORTHO05D005773 6.8e-136 488.0 475 55.4
Actinidia34230 Actinidia chinensis HOM05D002306 ORTHO05D005773 1.2e-135 487.3 338 68.9
C03p18010 Brassica napus HOM05D002306 ORTHO05D005773 3.4e-135 485.7 409 60.1
BolC3t14206H Brassica oleracea HOM05D002306 ORTHO05D005773 3.4e-135 485.7 409 60.1
BraA03t10837Z Brassica rapa HOM05D002306 ORTHO05D005773 5.8e-135 485.0 414 58.7
BcaC01g06217 Brassica carinata HOM05D002306 ORTHO05D005773 7.5e-135 484.6 409 60.1
Actinidia08661 Actinidia chinensis HOM05D002306 ORTHO05D005773 9.8e-135 484.2 375 63.5
Sp7g25780 Schrenkiella parvula HOM05D002306 ORTHO05D005773 9.8e-135 484.2 390 61.5
AL8G27680 Arabidopsis lyrata HOM05D002306 ORTHO05D005773 1.3e-134 483.8 448 55.8
Sp6g15210 Schrenkiella parvula HOM05D002306 ORTHO05D005773 3.7e-134 482.3 406 59.1
SGA_v2.0_scaffold44G16812 Striga asiatica HOM05D002306 ORTHO05D005773 8.3e-134 481.1 429 58.3
Psat6g034960 Pisum sativum HOM05D002306 ORTHO05D005773 1.1e-133 480.7 322 70.2
Lsat_1_v5_gn_9_49801 Lactuca sativa HOM05D002306 ORTHO05D005773 1.9e-133 479.9 404 59.4
ATR0602G226 Amborella trichopoda HOM05D002306 ORTHO05D005773 2.4e-133 479.6 401 60.1
Hma1.2p1_1587F.1_g292250 Hydrangea macrophylla HOM05D002306 ORTHO05D005773 2.4e-133 479.6 347 66.0
BcaC04g20512 Brassica carinata HOM05D002306 ORTHO05D005773 4.1e-133 478.8 405 58.0
BolC9t57152H Brassica oleracea HOM05D002306 ORTHO05D005773 4.1e-133 478.8 405 58.0
Zm00001eb294430 Zea mays HOM05D002306 ORTHO05D005773 4.1e-133 478.8 409 57.9
AUR62006082 Chenopodium quinoa HOM05D002306 ORTHO05D005773 5.4e-133 478.4 341 67.2
AUR62019412 Chenopodium quinoa HOM05D002306 ORTHO05D005773 7.0e-133 478.0 342 66.4
ECA232G4612 Erigeron canadensis HOM05D002306 ORTHO05D005773 9.2e-133 477.6 405 59.0
Eucgr.A01449 Eucalyptus grandis HOM05D002306 ORTHO05D005773 9.2e-133 477.6 396 60.1
PGR042G0827 Punica granatum HOM05D002306 ORTHO05D005773 1.2e-132 477.2 333 66.7
BcaB08g35665 Brassica carinata HOM05D002306 ORTHO05D005773 2.0e-132 476.5 405 58.5
A10p10540 Brassica napus HOM05D002306 ORTHO05D005773 2.0e-132 476.5 405 58.0
BraA10t43138Z Brassica rapa HOM05D002306 ORTHO05D005773 4.6e-132 475.3 405 57.8
HanXRQChr15g0485691 Helianthus annuus HOM05D002306 ORTHO05D005773 4.6e-132 475.3 406 60.1
HPP92_010499 Vanilla planifolia HOM05D002306 ORTHO05D005773 2.3e-131 473.0 404 58.9
HanXRQChr04g0100471 Helianthus annuus HOM05D002306 ORTHO05D005773 6.6e-131 471.5 405 58.8
Sabra12G0015300 Salix brachista HOM05D002306 ORTHO05D005773 8.1e-129 464.5 402 59.2
Actinidia08663 Actinidia chinensis HOM05D002306 ORTHO05D005773 1.4e-128 463.8 338 67.2
C09p42760 Brassica napus HOM05D002306 ORTHO05D005773 3.1e-128 462.6 433 54.0
Oeu060994.1 Olea europaea HOM05D002306 ORTHO05D005773 1.2e-127 460.7 412 57.8
Lsat_1_v5_gn_2_136261 Lactuca sativa HOM05D002306 ORTHO05D005773 7.5e-127 458.0 398 58.8
Zm00001eb342430 Zea mays HOM05D002306 ORTHO05D005773 1.1e-120 437.6 454 50.4
Sed0009393 Sechium edule HOM05D002306 ORTHO05D005773 7.6e-119 431.4 294 69.7
unitig_748.g7291 Utricularia gibba HOM05D002306 ORTHO05D005773 6.6e-115 418.3 338 61.8
Lj3C903G6 Lonicera japonica HOM05D002306 ORTHO05D005773 8.9e-112 407.9 288 69.1
Mapoly0155s0003 Marchantia polymorpha HOM05D002306 ORTHO05D005773 2.7e-100 369.8 361 48.2
Pp3c4_28770 Physcomitrium patens HOM05D002306 ORTHO05D005773 1.8e-96 357.1 356 47.8
CBR_g39074 Chara braunii HOM05D002306 ORTHO05D005773 1.5e-90 337.4 323 50.8
CBR_g52250 Chara braunii HOM05D002306 ORTHO05D005773 2.5e-90 336.7 326 51.5
AagrBONN_evm.TU.Sc2ySwM_228.3658 Anthoceros agrestis HOM05D002306 ORTHO05D005773 3.3e-90 336.3 326 50.0
SHI02360 Sapria himalayana HOM05D002306 ORTHO05D005773 6.0e-84 315.5 308 53.2
COL.COLO4_16788 Corchorus olitorius HOM05D002306 ORTHO05D005773 8.2e-81 305.1 199 71.4
SMO147G0069 Selaginella moellendorffii HOM05D002306 ORTHO05D005773 5.5e-77 292.4 281 52.0
QL05p052295 Quercus lobata HOM05D002306 ORTHO05D005773 2.5e-74 283.5 221 62.4
MBI06_g36471_MAGBIO Magnolia biondii HOM05D002306 ORTHO05D005773 5.7e-74 282.3 250 60.8
unitig_0.g2458 Utricularia gibba HOM05D000451 ORTHO05D000351 1.9e-69 267.3 294 49.3
SGA_v2.0_scaffold192G40528 Striga asiatica HOM05D005626 ORTHO05D007032 5.3e-64 249.2 334 43.4
CDE03G0512 Ceratophyllum demersum HOM05D002306 ORTHO05D005773 3.7e-49 199.9 174 54.6
Cre11.g481250 Chlamydomonas reinhardtii HOM05D002306 ORTHO05D005773 8.0e-44 182.2 295 37.6
Lsat_1_v5_gn_7_80100 Lactuca sativa HOM05D002306 ORTHO05D005773 5.2e-43 179.5 135 58.5
Ciclev10023844m.g Citrus clementina HOM05D002306 ORTHO05D005773 1.4e-40 171.4 192 49.0
Cre02.g077451 Chlamydomonas reinhardtii HOM05D002306 ORTHO05D005773 5.2e-35 152.9 322 30.4
PRCOL_00002303 Prasinoderma coloniale HOM05D002306 ORTHO05D005773 9.5e-29 132.1 318 29.6
Lj3C903G5 Lonicera japonica HOM05D002306 ORTHO05D005773 4.7e-28 129.8 113 59.3
COL.COLO4_16789 Corchorus olitorius HOM05D002476 ORTHO05D002652 6.8e-27 125.9 113 54.9
CDE03G0170 Ceratophyllum demersum HOM05D002306 ORTHO05D005773 1.5e-26 124.8 93 67.7
Actinidia03176 Actinidia chinensis HOM05D002306 ORTHO05D005773 1.1e-24 118.6 80 68.8
TPR.G40491 Trifolium pratense HOM05D002306 ORTHO05D005773 7.0e-24 115.9 61 85.2
SEGI_37240 Sequoiadendron giganteum HOM05D002306 ORTHO05D005773 1.0e-22 112.1 59 84.7
SEGI_09966 Sequoiadendron giganteum HOM05D002306 ORTHO05D005773 5.6e-21 106.3 127 49.6
Lsat_1_v5_gn_5_184380 Lactuca sativa HOM05D000942 ORTHO05D014303 2.3e-19 100.9 61 73.8
SEGI_13792 Sequoiadendron giganteum HOM05D002306 ORTHO05D005773 5.8e-18 96.3 64 65.6
TAR629G2756 Trochodendron aralioides HOM05D002306 ORTHO05D005773 1.7e-17 94.7 71 64.8
Medtr5g071310 Medicago truncatula HOM05D000009 ORTHO05D000008 8.3e-17 92.4 129 43.4
Oeu053931.1 Olea europaea HOM05D002306 ORTHO05D005773 1.3e-14 85.1 68 58.8
SEGI_03713 Sequoiadendron giganteum HOM05D002306 ORTHO05D036569 8.9e-11 72.4 50 70.0
Medtr5g070470 Medicago truncatula HOM05D000009 ORTHO05D000008 3.7e-09 67.0 146 34.9
PSO170G0253 Papaver somniferum HOM05D000363 ORTHO05D000236 3.7e-09 67.0 335 21.5
Lsat_1_v5_gn_7_88240 Lactuca sativa HOM05D000942 ORTHO05D014303 8.3e-09 65.9 120 38.3
Cpa.g.sc6.184 Carica papaya HOM05D000363 ORTHO05D000236 1.9e-08 64.7 145 31.0
Medtr5g070490 Medicago truncatula HOM05D000009 ORTHO05D000008 1.9e-08 64.7 110 39.1
HanXRQChr01g0001081 Helianthus annuus HOM05D000363 ORTHO05D000236 3.2e-08 63.9 266 21.4
AagrBONN_evm.TU.Sc2ySwM_362.2316 Anthoceros agrestis HOM05D000363 ORTHO05D000236 2.1e-07 61.2 157 29.3
AagrBONN_evm.TU.Sc2ySwM_362.2317 Anthoceros agrestis HOM05D000363 ORTHO05D000236 7.8e-07 59.3 157 28.7
MD02G1138500 Malus domestica HOM05D000363 ORTHO05D000236 1.0e-06 58.9 76 36.8
Medtr5g071570 Medicago truncatula HOM05D000009 ORTHO05D000008 1.0e-06 58.9 70 50.0
Prupe.7G162400 Prunus persica HOM05D000363 ORTHO05D000236 1.0e-06 58.9 100 33.0
MD15G1252000 Malus domestica HOM05D000363 ORTHO05D000236 1.3e-06 58.5 76 35.5
QL11p045365 Quercus lobata HOM05D000363 ORTHO05D000236 1.3e-06 58.5 144 32.6
Zm00001eb032970 Zea mays HOM05D000363 ORTHO05D000236 1.3e-06 58.5 86 36.0
CDE08G0389 Ceratophyllum demersum HOM05D000363 ORTHO05D000236 1.7e-06 58.2 75 37.3
GSVIVG01018184001 Vitis vinifera HOM05D000363 ORTHO05D000236 3.0e-06 57.4 144 30.6
Migut.D00141 Erythranthe guttata HOM05D000363 ORTHO05D000236 6.6e-06 56.2 364 19.2
PSO170G6498 Papaver somniferum HOM05D000363 ORTHO05D000236 6.6e-06 56.2 145 29.0
PSO407G0113 Papaver somniferum HOM05D000363 ORTHO05D000236 6.6e-06 56.2 145 29.0
PSO444G0001 Papaver somniferum HOM05D000363 ORTHO05D000236 6.6e-06 56.2 145 29.0
RcHm_v2.0_Chr2g0100321 Rosa chinensis HOM05D000363 ORTHO05D000236 6.6e-06 56.2 75 36.0
CANSAT01G2185 Cannabis sativa HOM05D000363 ORTHO05D000236 8.6e-06 55.8 145 29.7
FAN23G1427 Fragaria x ananassa HOM05D000363 ORTHO05D000236 8.6e-06 55.8 74 37.8
PSO170G0672 Papaver somniferum HOM05D000363 ORTHO05D000236 8.6e-06 55.8 145 29.0
PSO407G0103 Papaver somniferum HOM05D000363 ORTHO05D000236 8.6e-06 55.8 143 28.0


User provided reference genes

Program Settings