Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 7.7e-92 340.5 176 100.0
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 1.5e-66 256.5 176 76.7
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 3.2e-66 255.4 176 77.8
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 5.5e-66 254.6 174 77.0
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 7.2e-66 254.2 176 76.7
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 7.2e-66 254.2 177 78.5
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 2.1e-65 252.7 174 78.7
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 6.1e-65 251.1 176 76.1
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.8e-64 249.6 174 78.2
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.8e-64 249.6 174 78.2
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 1.8e-64 249.6 176 78.4
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 2.3e-64 249.2 175 77.1
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 2.3e-64 249.2 176 75.0
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 2.3e-64 249.2 176 75.0
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 2.3e-64 249.2 176 75.0
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 4.0e-64 248.4 174 76.4
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 4.0e-64 248.4 176 75.6
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 4.0e-64 248.4 177 78.0
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 5.2e-64 248.1 174 77.6
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 6.8e-64 247.7 175 76.0
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 8.8e-64 247.3 174 77.6
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 1.2e-63 246.9 176 78.4
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 1.2e-63 246.9 176 76.1
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 1.5e-63 246.5 176 76.7
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 1.5e-63 246.5 176 76.7
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 2.6e-63 245.7 176 76.1
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 2.6e-63 245.7 176 76.1
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 3.4e-63 245.4 174 77.0
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 5.7e-63 244.6 174 75.9
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 9.8e-63 243.8 175 73.7
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 1.3e-62 243.4 176 76.7
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 1.3e-62 243.4 176 76.7
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 1.3e-62 243.4 167 76.6
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 2.2e-62 242.7 176 75.6
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 2.8e-62 242.3 176 76.7
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 3.7e-62 241.9 174 76.4
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 3.7e-62 241.9 178 74.7
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 1.8e-61 239.6 174 74.7
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 1.8e-61 239.6 177 74.0
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 2.4e-61 239.2 177 75.1
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 3.1e-61 238.8 176 72.7
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 5.4e-61 238.0 174 74.7
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 5.4e-61 238.0 176 74.4
Lj6g0005877 Lotus japonicus HOM05D005631 ORTHO05D006765 5.4e-61 238.0 177 74.6
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 7.0e-61 237.7 185 70.8
Glyma.18G057300 Glycine max HOM05D005631 ORTHO05D006765 7.0e-61 237.7 177 74.0
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea HOM05D005631 ORTHO05D006765 9.2e-61 237.3 177 73.4
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 9.2e-61 237.3 176 72.2
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 1.2e-60 236.9 176 73.3
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 3.5e-60 235.3 167 76.6
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 5.9e-60 234.6 174 73.6
Glyma.11G164100 Glycine max HOM05D005631 ORTHO05D006765 5.9e-60 234.6 177 73.4
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 5.9e-60 234.6 174 73.0
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 1.3e-59 233.4 176 72.2
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 1.7e-59 233.0 174 73.0
Eucgr.B04002 Eucalyptus grandis HOM05D005631 ORTHO05D006765 2.3e-59 232.6 176 72.7
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 8.6e-59 230.7 176 73.9
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 1.1e-58 230.3 174 72.4
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 9.5e-58 227.3 176 69.9
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 9.5e-58 227.3 176 69.9
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 1.2e-57 226.9 176 69.9
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 1.2e-57 226.9 176 69.9
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 1.6e-57 226.5 176 69.9
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 1.6e-57 226.5 176 69.9
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 1.6e-57 226.5 176 69.9
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 1.6e-57 226.5 176 69.9
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 3.6e-57 225.3 177 69.5
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 4.7e-57 224.9 176 69.3
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 1.0e-56 223.8 176 68.8
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 1.0e-56 223.8 176 68.8
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 1.0e-56 223.8 176 68.8
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 3.0e-56 222.2 176 68.8
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 4.0e-56 221.9 176 68.2
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 6.8e-56 221.1 177 68.4
VMungo1383G2760 Vigna mungo HOM05D005631 ORTHO05D006765 6.8e-56 221.1 154 76.6
Nitab4.5_0003548g0030 Nicotiana tabacum HOM05D005631 ORTHO05D006765 8.9e-56 220.7 174 70.1
Aqoxy1G01288 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 3.4e-55 218.8 169 72.8
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 3.4e-55 218.8 175 67.4
ECA248G0403 Erigeron canadensis HOM05D005631 ORTHO05D006765 7.5e-55 217.6 168 70.8
CAN.G354.39 Capsicum annuum HOM05D005631 ORTHO05D006765 1.3e-54 216.9 175 69.1
PGSC0003DMG400022531 Solanum tuberosum HOM05D005631 ORTHO05D006765 3.7e-54 215.3 174 67.8
Solyc03g033480.4 Solanum lycopersicum HOM05D005631 ORTHO05D006765 4.9e-54 214.9 174 67.8
Cc07_g10850 Coffea canephora HOM05D005631 ORTHO05D006765 8.3e-54 214.2 177 67.8
Sopen03g006230 Solanum pennellii HOM05D005631 ORTHO05D006765 1.4e-53 213.4 174 67.2
Nitab4.5_0000438g0150 Nicotiana tabacum HOM05D005631 ORTHO05D006765 5.4e-53 211.5 174 67.8
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 1.6e-52 209.9 153 77.1
unitig_899.g14680 Utricularia gibba HOM05D005631 ORTHO05D006765 4.6e-52 208.4 174 65.5
COL.COLO4_11152 Corchorus olitorius HOM05D005631 ORTHO05D006765 1.7e-51 206.5 140 77.1
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 4.3e-50 201.8 177 62.7
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 1.6e-49 199.9 153 74.5
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 3.1e-48 195.7 179 59.8
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 4.9e-46 188.3 166 65.1
SEGI_31870 Sequoiadendron giganteum HOM05D005631 ORTHO05D006765 2.4e-45 186.0 141 68.8
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 4.6e-44 181.8 179 57.0
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 6.2e-41 171.4 156 65.4
TPR.G25706 Trifolium pratense HOM05D005631 ORTHO05D006765 1.1e-40 170.6 140 72.9
Psat5g026160 Pisum sativum HOM05D005631 ORTHO05D006765 9.9e-39 164.1 139 69.1
Oeu059678.1 Olea europaea HOM05D005631 ORTHO05D006765 4.9e-38 161.8 152 58.6
SMO134G0149 Selaginella moellendorffii HOM05D005631 ORTHO05D006765 8.3e-38 161.0 173 53.2
VMungo0540G1856 Vigna mungo HOM05D005631 ORTHO05D006765 1.1e-37 160.6 118 74.6
Peaxi162Scf00635g00621 Petunia axillaris HOM05D005631 ORTHO05D006765 1.9e-37 159.8 136 64.0
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 1.2e-36 157.1 139 68.3
Atru.chr3.4121 Acer truncatum HOM05D005631 ORTHO05D006765 2.7e-36 156.0 167 58.1
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 6.0e-36 154.8 156 60.3
AUR62001872 Chenopodium quinoa HOM05D005631 ORTHO05D006765 6.0e-36 154.8 139 66.9
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 6.4e-30 134.8 116 70.7
CiPaw.13G069500 Carya illinoinensis HOM05D005631 ORTHO05D006765 7.1e-29 131.3 106 72.6
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 8.7e-27 124.4 114 65.8
Actinidia34479 Actinidia chinensis HOM05D005631 ORTHO05D006765 5.6e-26 121.7 109 68.8
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 2.4e-24 116.3 98 68.4
MCO05G013 Micromonas commoda HOM05D005631 ORTHO05D006765 2.9e-22 109.4 167 43.7
AagrBONN_evm.TU.Sc2ySwM_117.69 Anthoceros agrestis HOM05D005631 ORTHO05D006765 3.8e-22 109.0 166 39.8
Sc21g0005270 Simmondsia chinensis HOM05D005631 ORTHO05D006765 9.6e-18 94.4 108 59.3
Sabra19G0122200 Salix brachista HOM05D005631 ORTHO05D006765 1.8e-16 90.1 90 63.3
Sabra16G0029400 Salix brachista HOM05D005631 ORTHO05D006765 5.8e-15 85.1 90 62.2
BcaC09g51457 Brassica carinata HOM05D005631 ORTHO05D006765 3.8e-14 82.4 62 74.2
Oeu008095.1 Olea europaea HOM05D005631 ORTHO05D006765 3.8e-14 82.4 75 66.7
BcaC05g26847 Brassica carinata HOM05D005631 ORTHO05D006765 4.9e-14 82.0 64 70.3
MBI18_g07568_MAGBIO Magnolia biondii HOM05D005631 ORTHO05D006765 8.4e-14 81.3 68 69.1
BolC1t05347H Brassica oleracea HOM05D005631 ORTHO05D006765 1.4e-13 80.5 62 72.6
A08p25520 Brassica napus HOM05D005631 ORTHO05D006765 4.2e-13 79.0 62 71.0
BcaC08g44597 Brassica carinata HOM05D005631 ORTHO05D006765 9.3e-13 77.8 63 73.0
BcaC09g51408 Brassica carinata HOM05D005631 ORTHO05D006765 1.2e-12 77.4 62 71.0
A07p13430 Brassica napus HOM05D005631 ORTHO05D006765 3.9e-11 72.4 62 69.4
Oeu008088.1 Olea europaea HOM05D005631 ORTHO05D006765 3.9e-11 72.4 45 73.3
Sabra07G0096200 Salix brachista HOM05D005274 ORTHO05D006765 3.9e-11 72.4 88 56.8
CDE02G1786 Ceratophyllum demersum HOM05D005631 ORTHO05D006765 4.3e-10 68.9 124 44.4
Sabra02G0153300 Salix brachista HOM05D005631 ORTHO05D006765 1.3e-09 67.4 67 64.2
Aqoxy1G01289 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 2.4e-08 63.2 40 87.5
BcaC02g08205 Brassica carinata HOM05D005631 ORTHO05D006765 5.3e-08 62.0 49 69.4
C01p12950 Brassica napus HOM05D005631 ORTHO05D006765 5.3e-08 62.0 43 79.1
Cre01.g044000 Chlamydomonas reinhardtii HOM05D005631 ORTHO05D006765 6.9e-08 61.6 136 37.5
C04p57300 Brassica napus HOM05D005631 ORTHO05D006765 9.0e-08 61.2 43 79.1
C01p13430 Brassica napus HOM05D005631 ORTHO05D006765 2.0e-07 60.1 43 76.7
CBR_g4734 Chara braunii HOM05D005631 ORTHO05D006765 4.5e-07 58.9 101 45.5
Sabra19G0131600 Salix brachista HOM05D005631 ORTHO05D006765 7.6e-07 58.2 96 47.9
Cc05_g02510 Coffea canephora HOM05D005631 ORTHO05D006765 9.9e-07 57.8 110 45.5
Sabra10G0082900 Salix brachista HOM05D005631 ORTHO05D006765 1.7e-06 57.0 60 58.3
Sabra16G0093500 Salix brachista HOM05D005274 ORTHO05D007424 6.4e-06 55.1 60 56.7


User provided reference genes

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