Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G3868 Papaver somniferum HOM05D005824 ORTHO05D007029 0.0e+00 1226.8 630 100.0
PSO384G0570 Papaver somniferum HOM05D005824 ORTHO05D007029 0.0e+00 1161.7 630 94.9
PSO017G5895 Papaver somniferum HOM05D005824 ORTHO05D007029 1.5e-294 1015.8 630 84.9
PSO063G2449 Papaver somniferum HOM05D005824 ORTHO05D007029 7.3e-278 960.3 632 80.9
TAR362G0448 Trochodendron aralioides HOM05D005824 ORTHO05D007029 3.4e-190 669.1 674 57.1
QL07p026733 Quercus lobata HOM05D005824 ORTHO05D007029 9.2e-188 661.0 669 56.7
GSVIVG01031305001 Vitis vinifera HOM05D005824 ORTHO05D007029 6.0e-187 658.3 666 56.2
CSS0029355 Camellia sinensis var. sinensis HOM05D005824 ORTHO05D007029 5.0e-186 655.2 664 56.0
CiPaw.10G020000 Carya illinoinensis HOM05D005824 ORTHO05D007029 3.6e-184 649.0 676 55.5
Dinv24497 Davidia involucrata HOM05D005824 ORTHO05D007029 3.7e-181 639.0 667 56.2
Aqoxy2G02580 Aquilegia oxysepala HOM05D005824 ORTHO05D007029 6.4e-181 638.3 663 54.3
Nn2g14227 Nelumbo nucifera HOM05D005824 ORTHO05D007029 2.7e-179 632.9 652 56.0
Cfa020078 Carpinus fangiana HOM05D005824 ORTHO05D007029 5.8e-174 615.1 671 54.7
Thecc.09G352900 Theobroma cacao HOM05D005824 ORTHO05D007029 2.9e-173 612.8 696 51.4
Rhsim11G0099700 Rhododendron simsii HOM05D005824 ORTHO05D007029 6.4e-173 611.7 652 54.1
Lj3g0001001 Lotus japonicus HOM05D005824 ORTHO05D007029 5.1e-170 602.1 717 50.2
Oeu061927.1 Olea europaea HOM05D005824 ORTHO05D007029 6.6e-170 601.7 710 50.7
Sopen01g044470 Solanum pennellii HOM05D005824 ORTHO05D007029 6.6e-170 601.7 675 52.7
Nitab4.5_0009690g0020 Nicotiana tabacum HOM05D005824 ORTHO05D007029 1.1e-169 600.9 673 52.3
Manes.06G027100 Manihot esculenta HOM05D005824 ORTHO05D007029 1.9e-169 600.1 671 52.6
SalBow7G3942 Salvia bowleyana HOM05D005824 ORTHO05D007029 4.3e-169 599.0 644 53.1
Cpa.g.sc48.209 Carica papaya HOM05D005824 ORTHO05D007029 5.6e-169 598.6 666 52.0
VMungo0720G2244 Vigna mungo HOM05D005824 ORTHO05D007029 7.3e-169 598.2 705 51.1
arahy.Tifrunner.gnm1.ann1.S86EGP Arachis hypogaea HOM05D005824 ORTHO05D007029 1.6e-168 597.0 717 48.8
Lalb_Chr02g0154321 Lupinus albus HOM05D005824 ORTHO05D007029 1.6e-168 597.0 718 50.0
PGSC0003DMG400018251 Solanum tuberosum HOM05D005824 ORTHO05D007029 2.1e-168 596.7 671 51.7
CAN.G1374.10 Capsicum annuum HOM05D005824 ORTHO05D007029 8.1e-168 594.7 669 52.2
arahy.Tifrunner.gnm1.ann1.E5V6X9 Arachis hypogaea HOM05D005824 ORTHO05D007029 1.1e-167 594.3 716 48.6
Lj5g0026124 Lotus japonicus HOM05D005824 ORTHO05D007029 1.8e-167 593.6 718 49.4
Gohir.A03G155800 Gossypium hirsutum HOM05D005824 ORTHO05D007029 2.6e-166 589.7 697 48.9
Gorai.005G200700 Gossypium raimondii HOM05D005824 ORTHO05D007029 4.4e-166 589.0 710 49.3
Sabra15G0009000 Salix brachista HOM05D005824 ORTHO05D007029 7.6e-166 588.2 735 47.2
Migut.B00860 Erythranthe guttata HOM05D005824 ORTHO05D007029 2.2e-165 586.6 634 51.9
Lj5A322T66 Lonicera japonica HOM05D005824 ORTHO05D007029 2.2e-165 586.6 633 54.3
MSTRG.15631 Avicennia marina HOM05D005824 ORTHO05D007029 2.9e-165 586.3 659 51.3
Potri.015G010900 Populus trichocarpa HOM05D005824 ORTHO05D007029 4.9e-165 585.5 719 47.8
TPR.G21237 Trifolium pratense HOM05D005824 ORTHO05D007029 1.4e-164 583.9 720 49.9
Medtr1g055080 Medicago truncatula HOM05D005824 ORTHO05D007029 4.6e-163 578.9 715 49.5
Atru.chr12.1601 Acer truncatum HOM05D005824 ORTHO05D007029 1.3e-162 577.4 701 48.5
Ca_11665_v3 Cicer arietinum L. HOM05D005824 ORTHO05D007029 1.3e-162 577.4 674 50.9
TPR.G12910 Trifolium pratense HOM05D005824 ORTHO05D007029 3.9e-162 575.9 713 49.1
MBI19_g32704_MAGBIO Magnolia biondii HOM05D005824 ORTHO05D007029 1.1e-161 574.3 726 48.5
Cc02_g35570 Coffea canephora HOM05D005824 ORTHO05D007029 7.3e-161 571.6 768 46.1
Haze_20113 Corylus avellana HOM05D005824 ORTHO05D007029 2.8e-160 569.7 728 49.6
Glyma.02G192500 Glycine max HOM05D005824 ORTHO05D007029 1.1e-159 567.8 717 47.0
Psat6g118640 Pisum sativum HOM05D005824 ORTHO05D007029 5.3e-159 565.5 725 47.4
Glyma.10G084300 Glycine max HOM05D005824 ORTHO05D007029 9.0e-159 564.7 713 48.2
Gohir.D02G178900 Gossypium hirsutum HOM05D005824 ORTHO05D007029 6.4e-157 558.5 710 47.3
vmacro01596 Vaccinium macrocarpon HOM05D005824 ORTHO05D007029 1.9e-156 557.0 637 51.6
TWI38G0226 Tripterygium wilfordii HOM05D005824 ORTHO05D007029 3.2e-156 556.2 656 51.1
COL.COLO4_11087 Corchorus olitorius HOM05D005824 ORTHO05D007029 1.2e-155 554.3 637 50.1
Phvul.007G265900 Phaseolus vulgaris HOM05D005824 ORTHO05D007029 1.2e-155 554.3 713 47.3
Sc09g0002470 Simmondsia chinensis HOM05D005824 ORTHO05D007029 1.2e-155 554.3 721 47.9
Eucgr.B01798 Eucalyptus grandis HOM05D005824 ORTHO05D007029 2.7e-155 553.1 672 48.7
AUR62006798 Chenopodium quinoa HOM05D005824 ORTHO05D007029 2.3e-154 550.1 758 45.9
ClCG07G011770 Citrullus lanatus HOM05D005824 ORTHO05D007029 3.9e-154 549.3 680 48.7
ECA247G2466 Erigeron canadensis HOM05D005824 ORTHO05D007029 6.6e-154 548.5 643 49.6
MELO3C017799.2 Cucumis melo HOM05D005824 ORTHO05D007029 1.1e-153 547.7 673 48.4
AUR62000450 Chenopodium quinoa HOM05D005824 ORTHO05D007029 7.4e-153 545.0 764 45.4
SGA_v2.0_scaffold33G13450 Striga asiatica HOM05D005824 ORTHO05D007029 3.6e-152 542.7 695 46.6
THA.LOC104821746 Tarenaya hassleriana HOM05D005824 ORTHO05D007029 1.4e-151 540.8 731 45.7
Prupe.6G306900 Prunus persica HOM05D005824 ORTHO05D007029 4.0e-151 539.3 700 48.0
Nitab4.5_0000185g0360 Nicotiana tabacum HOM05D005824 ORTHO05D007029 5.3e-151 538.9 669 48.6
CsaV3_4G002430 Cucumis sativus L. HOM05D005824 ORTHO05D007029 6.9e-151 538.5 676 48.5
Hund21844 Selenicereus undatus HOM05D005824 ORTHO05D007029 9.0e-151 538.1 803 43.8
EL10Ac4g09532 Beta vulgaris HOM05D005824 ORTHO05D007029 5.8e-150 535.4 726 43.8
Duzib168G0004 Durio zibethinus HOM05D005824 ORTHO05D007029 3.8e-149 532.7 636 49.7
RcHm_v2.0_Chr3g0458051 Rosa chinensis HOM05D005824 ORTHO05D007029 1.4e-148 530.8 706 47.7
CANSAT54G1845 Cannabis sativa HOM05D005824 ORTHO05D007029 5.5e-148 528.9 703 45.9
Duzib150G0567 Durio zibethinus HOM05D005824 ORTHO05D007029 7.1e-148 528.5 658 48.6
Hma1.2p1_1243F.1_g269980 Hydrangea macrophylla HOM05D005824 ORTHO05D007029 2.1e-147 526.9 543 56.2
Sed0007659 Sechium edule HOM05D005824 ORTHO05D007029 3.5e-147 526.2 674 46.7
MD12G1202100 Malus domestica HOM05D005824 ORTHO05D007029 2.3e-146 523.5 696 47.6
MD04G1189300 Malus domestica HOM05D005824 ORTHO05D007029 5.1e-146 522.3 697 47.2
FvH4_6g08180 Fragaria vesca HOM05D005824 ORTHO05D007029 2.5e-140 503.4 704 45.5
FAN14G3202 Fragaria x ananassa HOM05D005824 ORTHO05D007029 4.2e-140 502.7 705 45.7
Carub.0006s2449 Capsella rubella HOM05D005824 ORTHO05D007029 2.1e-139 500.4 725 42.9
FAN09G3961 Fragaria x ananassa HOM05D005824 ORTHO05D007029 5.1e-138 495.7 703 45.2
ATR0693G066 Amborella trichopoda HOM05D005824 ORTHO05D007029 1.6e-136 490.7 623 46.2
Peaxi162Scf00357g00429 Petunia axillaris HOM05D005824 ORTHO05D007029 1.1e-135 488.0 582 50.9
Thhalv10003721m.g Eutrema salsugineum HOM05D005824 ORTHO05D007029 5.3e-135 485.7 737 41.9
Sp2g21220 Schrenkiella parvula HOM05D005824 ORTHO05D007029 5.9e-134 482.3 738 42.1
CDE01G0540 Ceratophyllum demersum HOM05D005824 ORTHO05D007029 3.8e-133 479.6 677 44.6
CARHR186810 Cardamine hirsuta HOM05D005824 ORTHO05D007029 4.6e-131 472.6 736 41.0
Aa31LG11G9880 Aethionema arabicum HOM05D005824 ORTHO05D007029 1.0e-130 471.5 716 42.2
unitig_748.g6998 Utricularia gibba HOM05D005824 ORTHO05D000260 5.7e-129 465.7 652 43.9
DCAR_005271 Daucus carota HOM05D005824 ORTHO05D007029 1.6e-128 464.2 680 43.5
AT5G26760 Arabidopsis thaliana HOM05D005824 ORTHO05D007029 4.8e-128 462.6 760 41.1
Ah.10g027060 Amaranthus hybridus HOM05D005824 ORTHO05D007029 1.1e-124 451.4 758 40.9
FAN05G5613 Fragaria x ananassa HOM05D005824 ORTHO05D007029 7.2e-124 448.7 697 43.3
AL6G38630 Arabidopsis lyrata HOM05D005824 ORTHO05D007029 6.1e-123 445.7 862 36.4
Nitab4.5_0002783g0020 Nicotiana tabacum HOM05D005824 ORTHO05D007029 5.7e-121 439.1 641 44.6
Lsat_1_v5_gn_9_78801 Lactuca sativa HOM05D005824 ORTHO05D007029 9.7e-121 438.3 608 46.1
HanXRQChr12g0362901 Helianthus annuus HOM05D005824 ORTHO05D007029 1.3e-117 427.9 626 43.9
BraA02t08872Z Brassica rapa HOM05D005824 ORTHO05D007029 4.7e-115 419.5 851 34.9
A02p39030 Brassica napus HOM05D005824 ORTHO05D007029 1.4e-114 417.9 849 35.0
FAN02G4519 Fragaria x ananassa HOM05D005824 ORTHO05D007029 2.8e-112 410.2 683 41.9
BolC2t11924H Brassica oleracea HOM05D005824 ORTHO05D007029 3.5e-110 403.3 824 35.1
C02p58640 Brassica napus HOM05D005824 ORTHO05D007029 5.9e-110 402.5 821 35.2
Ciclev10011677m.g Citrus clementina HOM05D005824 ORTHO05D007029 2.6e-105 387.1 469 48.2
Os05g0134300 Oryza sativa ssp. japonica HOM05D005824 ORTHO05D007029 6.1e-99 365.9 741 36.7
PGR083G1123 Punica granatum HOM05D005824 ORTHO05D007029 1.3e-96 358.2 509 45.8
BcaNung06222 Brassica carinata HOM05D005824 ORTHO05D007029 1.1e-95 355.1 819 34.1
BcaNung03676 Brassica carinata HOM05D005824 ORTHO05D007029 6.8e-90 335.9 644 36.8
C07p41490 Brassica napus HOM05D005824 ORTHO05D007029 2.0e-89 334.3 654 36.9
BolC7t44682H Brassica oleracea HOM05D005824 ORTHO05D007029 2.0e-89 334.3 660 37.0
Actinidia35501 Actinidia chinensis HOM05D005824 ORTHO05D007029 1.0e-82 312.0 625 37.4
Gohir.A08G201701 Gossypium hirsutum HOM05D005824 ORTHO05D007029 8.3e-80 302.4 634 36.3
Mapoly0075s0015 Marchantia polymorpha HOM05D005824 ORTHO05D007029 3.0e-69 267.3 736 29.3
HPP92_021934 Vanilla planifolia HOM05D005824 ORTHO05D007029 9.5e-68 262.3 393 40.5
Solyc01g101010.4 Solanum lycopersicum HOM05D005824 ORTHO05D007029 2.1e-67 261.2 249 57.0
Zm00001eb354720 Zea mays HOM05D005824 ORTHO05D007029 4.7e-67 260.0 629 34.5
SMO203G0090 Selaginella moellendorffii HOM05D005824 ORTHO05D007029 1.0e-61 242.3 620 31.1
Nitab4.5_0000185g0370 Nicotiana tabacum HOM05D005824 ORTHO05D007029 2.2e-56 224.6 275 45.8
SEGI_20129 Sequoiadendron giganteum HOM05D005824 ORTHO05D007029 1.3e-53 215.3 420 37.4
AagrBONN_evm.TU.Sc2ySwM_117.2728 Anthoceros agrestis HOM05D005824 ORTHO05D007029 1.9e-52 211.5 625 26.9
Hma1.2p1_1553F.1_g290340 Hydrangea macrophylla HOM05D005824 ORTHO05D007029 6.9e-50 203.0 616 33.4
SGA_v2.0_scaffold438G51629 Striga asiatica HOM05D005824 ORTHO05D007029 3.8e-48 197.2 207 50.2
Pp3c6_10400 Physcomitrium patens HOM05D005824 ORTHO05D007029 5.1e-45 186.8 187 46.5
Oeu060660.1 Olea europaea HOM05D005824 ORTHO05D007029 6.4e-40 169.9 126 65.9
CBR_g20185 Chara braunii HOM05D005824 ORTHO05D007029 8.4e-40 169.5 356 31.5
A06p36990 Brassica napus HOM05D005824 ORTHO05D007029 9.3e-39 166.0 176 47.2
BraA06t26625Z Brassica rapa HOM05D005824 ORTHO05D007029 9.3e-39 166.0 176 47.2
Dinv30929 Davidia involucrata HOM05D005824 ORTHO05D007029 1.4e-34 152.1 125 67.2
HPP92_021933 Vanilla planifolia HOM05D005824 ORTHO05D007029 6.4e-32 143.3 240 38.3
Cfa020079 Carpinus fangiana HOM05D005824 ORTHO05D007029 3.8e-24 117.5 82 68.3
Nitab4.5_0000185g0350 Nicotiana tabacum HOM05D005824 ORTHO05D007029 1.1e-23 115.9 101 62.4
CANSAT54G0922 Cannabis sativa HOM05D005824 ORTHO05D007029 3.0e-21 107.8 213 37.6
CDE12G0845 Ceratophyllum demersum HOM05D005824 ORTHO05D007029 1.6e-19 102.1 88 58.0
Zm00001eb056090 Zea mays HOM05D000739 ORTHO05D007029 1.7e-16 92.0 133 40.6
Zm00001eb289330 Zea mays HOM05D005824 ORTHO05D007029 7.2e-15 86.7 113 43.4
AUR62009842 Chenopodium quinoa HOM05D003327 ORTHO05D004535 1.3e-11 75.9 173 35.3


User provided reference genes

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