Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G3749 Papaver somniferum HOM05D001338 ORTHO05D001239 1.0e-182 643.3 322 100.0
PSO063G4296 Papaver somniferum HOM05D001338 ORTHO05D001239 3.4e-114 415.6 310 72.6
PSO832G0837 Papaver somniferum HOM05D001338 ORTHO05D001239 1.2e-90 337.4 229 78.2
PSO541G5408 Papaver somniferum HOM05D001338 ORTHO05D001239 5.9e-82 308.5 163 90.2
PSO144G0149 Papaver somniferum HOM05D001338 ORTHO05D001239 1.7e-57 227.3 294 43.2
PSO063G7197 Papaver somniferum HOM05D001338 ORTHO05D001239 7.3e-56 221.9 352 40.1
PSO764G0071 Papaver somniferum HOM05D001338 ORTHO05D001239 4.7e-55 219.2 313 41.2
PSO478G4662 Papaver somniferum HOM05D001338 ORTHO05D001239 6.2e-55 218.8 320 40.3
PSO478G1760 Papaver somniferum HOM05D001338 ORTHO05D001239 1.1e-54 218.0 320 40.3
PSO170G2214 Papaver somniferum HOM05D001338 ORTHO05D001239 2.9e-52 209.9 315 40.3
PSO063G6584 Papaver somniferum HOM05D001338 ORTHO05D001239 4.9e-52 209.1 351 38.7
PSO832G4176 Papaver somniferum HOM05D001338 ORTHO05D001239 4.9e-52 209.1 320 40.0
PSO478G0790 Papaver somniferum HOM05D001338 ORTHO05D001239 2.4e-51 206.8 235 46.8
PSO478G0891 Papaver somniferum HOM05D001338 ORTHO05D001239 4.1e-51 206.1 334 38.6
PSO761G0174 Papaver somniferum HOM05D001338 ORTHO05D001239 9.2e-51 204.9 339 37.8
PSO104G0173 Papaver somniferum HOM05D001338 ORTHO05D001239 3.5e-50 203.0 339 38.1
PSO781G0133 Papaver somniferum HOM05D001338 ORTHO05D001239 6.0e-50 202.2 176 52.8
PSO541G2490 Papaver somniferum HOM05D001338 ORTHO05D001239 3.0e-49 199.9 336 38.1
PSO063G4981 Papaver somniferum HOM05D001338 ORTHO05D001239 6.6e-49 198.7 307 40.4
PSO170G1703 Papaver somniferum HOM05D001338 ORTHO05D001239 1.1e-48 198.0 339 37.2
CSS0027088 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 8.1e-47 191.8 213 45.5
TWI31G1167 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 5.2e-46 189.1 288 39.6
TWI74G0957 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 5.2e-46 189.1 288 39.6
PSO384G4132 Papaver somniferum HOM05D001338 ORTHO05D001239 3.4e-45 186.4 301 40.5
PSO675G8898 Papaver somniferum HOM05D001338 ORTHO05D001239 4.4e-45 186.0 302 40.1
PSO541G1638 Papaver somniferum HOM05D001338 ORTHO05D001239 2.2e-44 183.7 299 39.8
PSO801G0680 Papaver somniferum HOM05D001338 ORTHO05D001239 4.9e-44 182.6 299 40.5
CSS0047876 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 8.4e-44 181.8 200 44.0
CSS0006650 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 2.4e-43 180.3 219 42.9
TWI18G0851 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 2.4e-43 180.3 288 38.2
CSS0005716 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 3.2e-43 179.9 178 49.4
CANSAT11G1935 Cannabis sativa HOM05D001338 ORTHO05D001239 4.1e-43 179.5 324 36.4
RcHm_v2.0_Chr7g0198811 Rosa chinensis HOM05D001338 ORTHO05D001239 7.8e-42 175.3 288 41.3
Thhalv10017956m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 1.7e-41 174.1 292 38.0
Oeu012605.1 Olea europaea HOM05D001338 ORTHO05D001239 3.9e-41 172.9 293 36.5
FvH4_4g01531 Fragaria vesca HOM05D001338 ORTHO05D001239 8.6e-41 171.8 296 38.9
TWI31G0800 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.9e-40 170.6 267 37.8
AT4G10200 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 1.1e-38 164.9 177 48.6
Zm00001eb077850 Zea mays HOM05D001338 ORTHO05D001239 1.4e-38 164.5 296 36.1
Thhalv10009736m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 3.1e-38 163.3 287 36.2
Thhalv10009558m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 8.9e-38 161.8 287 35.9
CANSAT21G2437 Cannabis sativa HOM05D001338 ORTHO05D001239 4.4e-37 159.5 216 43.1
PSO063G1472 Papaver somniferum HOM05D001338 ORTHO05D001239 4.4e-37 159.5 245 40.8
CANSAT21G0118 Cannabis sativa HOM05D001338 ORTHO05D001239 1.3e-36 157.9 216 43.1
PSO210G1522 Papaver somniferum HOM05D001338 ORTHO05D001239 2.2e-36 157.1 298 35.9
BolC2t08893H Brassica oleracea HOM05D001338 ORTHO05D001239 3.8e-36 156.4 257 38.9
PSO063G3812 Papaver somniferum HOM05D001338 ORTHO05D001239 3.8e-36 156.4 286 35.7
PSO210G0436 Papaver somniferum HOM05D001338 ORTHO05D001239 4.9e-36 156.0 176 43.8
PSO541G0488 Papaver somniferum HOM05D001338 ORTHO05D001239 9.3e-35 151.8 217 39.2
Zm00001eb237490 Zea mays HOM05D001338 ORTHO05D001239 1.6e-34 151.0 239 36.4
Medtr4g010145 Medicago truncatula HOM05D001338 ORTHO05D016692 2.7e-34 150.2 263 41.1
Oeu016868.1 Olea europaea HOM05D001338 ORTHO05D001239 2.7e-34 150.2 200 39.0
PSO210G5802 Papaver somniferum HOM05D001338 ORTHO05D001239 3.5e-34 149.8 231 39.8
ECA236G1638 Erigeron canadensis HOM05D001338 ORTHO05D001239 4.6e-34 149.4 265 38.9
HanXRQChr11g0321041 Helianthus annuus HOM05D001338 ORTHO05D001239 6.0e-34 149.1 174 40.8
Oeu028129.1 Olea europaea HOM05D001338 ORTHO05D001239 7.8e-34 148.7 199 38.7
CANSAT35G0728 Cannabis sativa HOM05D001338 ORTHO05D001239 1.0e-33 148.3 241 38.6
CANSAT54G1040 Cannabis sativa HOM05D001338 ORTHO05D001239 1.3e-33 147.9 147 49.7
Oeu063768.1 Olea europaea HOM05D001338 ORTHO05D001239 5.1e-33 146.0 197 39.1
TWI73G0975 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 6.6e-33 145.6 307 35.2
FvH4_1g08761 Fragaria vesca HOM05D001338 ORTHO05D001239 1.5e-32 144.4 309 35.9
AL4G20870 Arabidopsis lyrata HOM05D001338 ORTHO05D001239 1.9e-32 144.1 274 36.1
Oeu029248.1 Olea europaea HOM05D001338 ORTHO05D001239 1.9e-32 144.1 171 40.9
PSO421G0097 Papaver somniferum HOM05D001338 ORTHO05D001239 2.5e-32 143.7 310 35.2
FvH4_5g30891 Fragaria vesca HOM05D001338 ORTHO05D001239 5.6e-32 142.5 309 35.6
Oeu054316.1 Olea europaea HOM05D001338 ORTHO05D001239 7.3e-32 142.1 207 36.2
Zm00001eb027500 Zea mays HOM05D001338 ORTHO05D001239 9.6e-32 141.7 248 36.7
Glyma.14G107400 Glycine max HOM05D001338 ORTHO05D001239 1.3e-31 141.4 208 38.0
Glyma.12G093566 Glycine max HOM05D001338 ORTHO05D001239 3.1e-30 136.7 150 46.0
Sp4g09900 Schrenkiella parvula HOM05D001338 ORTHO05D001239 6.9e-30 135.6 149 45.6
ECA232G0049 Erigeron canadensis HOM05D001338 ORTHO05D001239 1.2e-29 134.8 288 35.8
Oeu008700.1 Olea europaea HOM05D001338 ORTHO05D001239 3.4e-29 133.3 298 32.6
CARHR103200 Cardamine hirsuta HOM05D001338 ORTHO05D001239 7.6e-29 132.1 135 48.9
CANSAT64G1081 Cannabis sativa HOM05D001338 ORTHO05D001239 9.9e-29 131.7 272 36.4
PSO384G2104 Papaver somniferum HOM05D001338 ORTHO05D001239 9.9e-29 131.7 125 52.0
PSO017G0847 Papaver somniferum HOM05D001338 ORTHO05D001239 1.3e-28 131.3 287 32.8
AUR62026124 Chenopodium quinoa HOM05D001338 ORTHO05D001239 2.2e-28 130.6 244 36.5
PSO781G0216 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-27 127.9 273 34.4
MD01G1087700 Malus domestica HOM05D001113 ORTHO05D000968 5.4e-27 125.9 193 37.3
PSO210G4276 Papaver somniferum HOM05D001338 ORTHO05D001239 5.4e-27 125.9 125 49.6
TPR.G34669 Trifolium pratense HOM05D001338 ORTHO05D001239 5.4e-27 125.9 205 39.0
PSO541G2431 Papaver somniferum HOM05D001338 ORTHO05D001239 7.1e-27 125.6 288 31.2
RcHm_v2.0_Chr1g0320361 Rosa chinensis HOM05D001338 ORTHO05D001239 7.1e-27 125.6 296 32.8
PSO384G1931 Papaver somniferum HOM05D001338 ORTHO05D001239 1.6e-26 124.4 236 36.9
TWI81G1066 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.6e-26 124.4 122 49.2
PSO478G0924 Papaver somniferum HOM05D001338 ORTHO05D001239 2.1e-26 124.0 144 45.8
Aqoxy5G02339 Aquilegia oxysepala HOM05D001338 ORTHO05D001239 2.7e-26 123.6 129 47.3
Oeu042321.2 Olea europaea HOM05D001338 ORTHO05D001239 4.6e-26 122.9 293 32.4
HanXRQChr10g0286761 Helianthus annuus HOM05D001338 ORTHO05D001239 6.0e-26 122.5 307 32.2
PSO724G0974 Papaver somniferum HOM05D001338 ORTHO05D001239 5.1e-25 119.4 260 33.1
Oeu053421.1 Olea europaea HOM05D001338 ORTHO05D001239 1.1e-24 118.2 158 38.6
PSO832G0893 Papaver somniferum HOM05D001338 ORTHO05D001239 1.5e-24 117.9 279 33.0
Oeu003234.1 Olea europaea HOM05D001338 ORTHO05D001239 1.9e-24 117.5 229 33.6
TWI74G0662 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 3.3e-24 116.7 227 33.9
Gohir.D06G166250 Gossypium hirsutum HOM05D001338 ORTHO05D001239 2.8e-23 113.6 177 36.2
PSO138G0010 Papaver somniferum HOM05D001338 ORTHO05D001239 8.1e-23 112.1 128 50.8
PSO724G1235 Papaver somniferum HOM05D001338 ORTHO05D001239 9.0e-22 108.6 296 31.4
Oeu063541.1 Olea europaea HOM05D001338 ORTHO05D001239 1.5e-21 107.8 160 36.9
AUR62037832 Chenopodium quinoa HOM05D001338 ORTHO05D001239 2.6e-21 107.1 163 38.0
CSS0011720 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 4.5e-21 106.3 100 47.0
CSS0039736 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 4.5e-21 106.3 100 47.0
FvH4_2g32571 Fragaria vesca HOM05D001338 ORTHO05D001239 5.8e-21 105.9 105 48.6
Zm00001eb123550 Zea mays HOM05D001338 ORTHO05D001239 1.7e-20 104.4 214 34.6
CANSAT01G1009 Cannabis sativa HOM05D001338 ORTHO05D001239 3.8e-20 103.2 153 38.6
CANSAT11G0800 Cannabis sativa HOM05D001338 ORTHO05D001239 3.8e-20 103.2 159 41.5
Zm00001eb152380 Zea mays HOM05D001338 ORTHO05D001239 3.8e-20 103.2 214 34.1
Medtr5g056540 Medicago truncatula HOM05D001338 ORTHO05D001239 4.9e-20 102.8 237 32.9
CANSAT54G1041 Cannabis sativa HOM05D001338 ORTHO05D001239 1.4e-19 101.3 293 30.7
CiPaw.02G115100 Carya illinoinensis HOM05D001338 ORTHO05D001239 1.4e-19 101.3 99 50.5
FvH4_6g47642 Fragaria vesca HOM05D001338 ORTHO05D001239 1.2e-18 98.2 249 31.7
TWI74G1236 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.2e-18 98.2 213 32.4
TPR.G25675 Trifolium pratense HOM05D000006 ORTHO05D000001 3.5e-18 96.7 115 40.0
Oeu012998.1 Olea europaea HOM05D001338 ORTHO05D001239 6.0e-18 95.9 119 37.8
Oeu006251.1 Olea europaea HOM05D001338 ORTHO05D001239 7.9e-18 95.5 123 40.7
MD02G1227000 Malus domestica HOM05D000696 ORTHO05D001239 1.0e-17 95.1 130 39.2
Oeu034372.1 Olea europaea HOM05D001338 ORTHO05D001239 1.0e-17 95.1 111 41.4
Oeu063134.1 Olea europaea HOM05D001338 ORTHO05D001239 1.3e-17 94.7 229 33.2
Oeu052557.1 Olea europaea HOM05D001338 ORTHO05D001239 3.9e-17 93.2 111 40.5
Oeu056073.1 Olea europaea HOM05D001338 ORTHO05D001239 3.9e-17 93.2 234 32.5
Gohir.A06G101504 Gossypium hirsutum HOM05D001338 ORTHO05D001239 5.1e-17 92.8 239 29.7
RcHm_v2.0_Chr7g0230921 Rosa chinensis HOM05D001338 ORTHO05D029707 5.1e-17 92.8 202 36.6
Zm00001eb109540 Zea mays HOM05D001338 ORTHO05D001239 5.1e-17 92.8 144 37.5
Zm00001eb125380 Zea mays HOM05D001338 ORTHO05D001239 5.1e-17 92.8 144 37.5
PSO801G0142 Papaver somniferum HOM05D001338 ORTHO05D001239 6.7e-17 92.4 240 32.1
Oeu012177.1 Olea europaea HOM05D001338 ORTHO05D001239 8.7e-17 92.0 108 41.7
PSO384G4498 Papaver somniferum HOM05D001338 ORTHO05D001239 1.1e-16 91.7 60 78.3
Oeu048409.1 Olea europaea HOM05D001338 ORTHO05D001239 4.8e-15 86.3 112 41.1
RcHm_v2.0_Chr6g0308901 Rosa chinensis HOM05D001338 ORTHO05D001239 1.8e-14 84.3 83 50.6
Sp6g08540 Schrenkiella parvula HOM05D001338 ORTHO05D001239 2.4e-14 84.0 210 31.0
AT2G06500 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 3.1e-14 83.6 83 49.4
CANSAT80G1592 Cannabis sativa HOM05D001338 ORTHO05D001239 4.0e-14 83.2 90 41.1
TPR.G17453 Trifolium pratense HOM05D001338 ORTHO05D001239 6.9e-14 82.4 109 36.7
Oeu023192.1 Olea europaea HOM05D001338 ORTHO05D001239 1.2e-13 81.6 86 47.7
AT1G35150 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 7.6e-13 79.0 87 44.8
CSS0007608 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 7.6e-13 79.0 75 48.0
Oeu023799.1 Olea europaea HOM05D001338 ORTHO05D001239 2.9e-12 77.0 111 35.1
PSO724G1135 Papaver somniferum HOM05D001338 ORTHO05D001239 2.9e-12 77.0 77 46.8
CANSAT46G0001 Cannabis sativa HOM05D001338 ORTHO05D001239 3.8e-12 76.6 150 36.7
Oeu034167.1 Olea europaea HOM05D001338 ORTHO05D001239 4.9e-12 76.3 83 44.6
PSO063G5018 Papaver somniferum HOM05D001338 ORTHO05D001239 4.9e-12 76.3 77 45.5
PSO339G3643 Papaver somniferum HOM05D001338 ORTHO05D001239 8.4e-12 75.5 77 45.5
Oeu037760.1 Olea europaea HOM05D001338 ORTHO05D001239 1.1e-11 75.1 83 44.6
Oeu064839.1 Olea europaea HOM05D001338 ORTHO05D001239 4.2e-11 73.2 140 38.6
FvH4_1g10851 Fragaria vesca HOM05D001338 ORTHO05D001239 1.6e-10 71.2 165 31.5
Oeu005280.1 Olea europaea HOM05D001338 ORTHO05D001239 3.5e-10 70.1 89 40.4
PSO386G0185 Papaver somniferum HOM05D001338 ORTHO05D001239 3.5e-10 70.1 84 41.7
PSO782G2576 Papaver somniferum HOM05D001338 ORTHO05D001239 4.6e-10 69.7 221 30.8
Sopen09g021130 Solanum pennellii HOM05D000254 ORTHO05D000165 6.0e-10 69.3 172 29.1
Sopen11g008380 Solanum pennellii HOM05D000254 ORTHO05D000165 1.0e-09 68.6 173 28.3
Sopen03g006690 Solanum pennellii HOM05D000254 ORTHO05D000165 1.8e-09 67.8 173 29.5
Glyma.18G183000 Glycine max HOM05D001338 ORTHO05D001239 2.3e-09 67.4 63 46.0
FvH4_7g07902 Fragaria vesca HOM05D001338 ORTHO05D001239 5.1e-09 66.2 112 37.5
PSO675G0288 Papaver somniferum HOM05D000254 ORTHO05D000165 5.1e-09 66.2 154 28.6
PSO765G0063 Papaver somniferum HOM05D000254 ORTHO05D000165 5.1e-09 66.2 154 28.6
CARHR048790 Cardamine hirsuta HOM05D001338 ORTHO05D001239 8.7e-09 65.5 60 53.3
Oeu035174.1 Olea europaea HOM05D001338 ORTHO05D001239 1.5e-08 64.7 63 46.0
Sp1g32380 Schrenkiella parvula HOM05D001338 ORTHO05D001239 1.5e-08 64.7 265 28.7
Oeu020403.1 Olea europaea HOM05D001338 ORTHO05D001239 2.5e-08 63.9 73 43.8
PSO063G1384 Papaver somniferum HOM05D000254 ORTHO05D000165 4.3e-08 63.2 154 28.6
Zm00001eb204510 Zea mays HOM05D001338 ORTHO05D001239 4.3e-08 63.2 57 49.1
SGA_v2.0_scaffold219G42580 Striga asiatica HOM05D000254 ORTHO05D000165 7.4e-08 62.4 181 26.5
CiPaw.04G075300 Carya illinoinensis HOM05D001338 ORTHO05D001239 9.6e-08 62.0 100 34.0
SGA_v2.0_scaffold38G15060 Striga asiatica HOM05D000254 ORTHO05D000165 1.3e-07 61.6 172 26.2
SGA_v2.0_scaffold8G04504 Striga asiatica HOM05D000254 ORTHO05D000165 1.3e-07 61.6 148 27.0
Oeu052066.1 Olea europaea HOM05D001338 ORTHO05D001239 2.8e-07 60.5 72 36.1
PSO063G5722 Papaver somniferum HOM05D001338 ORTHO05D001239 8.2e-07 58.9 62 46.8
FAN09G2928 Fragaria x ananassa HOM05D001338 ORTHO05D001239 1.1e-06 58.5 57 47.4
PSO832G3724 Papaver somniferum HOM05D000254 ORTHO05D000165 1.1e-06 58.5 98 32.7
Thhalv10001096m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 2.4e-06 57.4 59 49.2
Oeu064240.1 Olea europaea HOM05D001338 ORTHO05D001239 2.4e-06 57.4 62 41.9
PSO461G0028 Papaver somniferum HOM05D001338 ORTHO05D001239 2.4e-06 57.4 205 29.3
CARHR217460 Cardamine hirsuta HOM05D001338 ORTHO05D001239 3.1e-06 57.0 59 47.5
Thhalv10016048m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 4.1e-06 56.6 56 50.0
Thhalv10024135m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 6.9e-06 55.8 161 29.2


User provided reference genes

Program Settings