Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G2835 Papaver somniferum HOM05D003570 ORTHO05D004207 0.0e+00 1181.0 705 100.0
PSO063G4933 Papaver somniferum HOM05D003570 ORTHO05D004207 0.0e+00 1135.2 679 96.3
PSO063G1535 Papaver somniferum HOM05D003570 ORTHO05D004207 2.6e-175 619.8 406 93.3
PSO063G3251 Papaver somniferum HOM05D003570 ORTHO05D004207 1.0e-174 617.8 660 59.7
TAR622G0746 Trochodendron aralioides HOM05D003570 ORTHO05D004207 1.2e-156 557.8 661 54.5
PSO754G0035 Papaver somniferum HOM05D003570 ORTHO05D004207 2.7e-156 556.6 336 87.5
Nn4g22548 Nelumbo nucifera HOM05D003570 ORTHO05D004207 4.1e-144 516.2 661 49.9
Haze_12279 Corylus avellana HOM05D003570 ORTHO05D004207 3.5e-143 513.1 656 54.0
Ciclev10030923m.g Citrus clementina HOM05D003570 ORTHO05D004207 3.8e-142 509.6 649 52.1
COL.COLO4_23499 Corchorus olitorius HOM05D003570 ORTHO05D004207 8.5e-142 508.4 655 52.1
Gorai.012G173500 Gossypium raimondii HOM05D003570 ORTHO05D004207 4.4e-138 496.1 646 54.2
Duzib248G0757 Durio zibethinus HOM05D003570 ORTHO05D004207 1.7e-137 494.2 654 50.9
Gohir.D04G180400 Gossypium hirsutum HOM05D003570 ORTHO05D004207 2.2e-137 493.8 646 52.5
CiPaw.06G064800 Carya illinoinensis HOM05D003570 ORTHO05D004207 1.4e-136 491.1 646 53.1
GSVIVG01000572001 Vitis vinifera HOM05D003570 ORTHO05D004207 3.1e-136 490.0 663 49.6
Thecc.02G265200 Theobroma cacao HOM05D003570 ORTHO05D004207 1.2e-135 488.0 651 49.8
Gohir.A04G137200 Gossypium hirsutum HOM05D003570 ORTHO05D004207 5.9e-135 485.7 652 52.9
Potri.008G183500 Populus trichocarpa HOM05D003570 ORTHO05D004207 7.7e-135 485.3 650 52.3
CANSAT11G1164 Cannabis sativa HOM05D003570 ORTHO05D004207 2.3e-134 483.8 660 48.3
Eucgr.B03244 Eucalyptus grandis HOM05D003570 ORTHO05D004207 3.8e-134 483.0 658 50.5
Actinidia37450 Actinidia chinensis HOM05D003570 ORTHO05D004207 1.1e-133 481.5 655 48.1
Manes.13G020900 Manihot esculenta HOM05D003570 ORTHO05D004207 7.2e-133 478.8 654 49.4
Nitab4.5_0002373g0110 Nicotiana tabacum HOM05D003570 ORTHO05D004207 9.5e-133 478.4 649 46.1
QL03p056574 Quercus lobata HOM05D003570 ORTHO05D004207 9.5e-133 478.4 617 54.0
Prupe.1G241900 Prunus persica HOM05D003570 ORTHO05D004207 2.3e-131 473.8 653 50.4
Aqoxy7G03799 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 3.0e-131 473.4 649 49.6
TWI36G1196 Tripterygium wilfordii HOM05D003570 ORTHO05D004207 9.8e-130 468.4 644 48.8
CAN.G1572.8 Capsicum annuum HOM05D003570 ORTHO05D004207 1.1e-128 464.9 639 49.6
Sc04g0009680 Simmondsia chinensis HOM05D003570 ORTHO05D004207 5.4e-128 462.6 648 47.1
PGR102G1250 Punica granatum HOM05D003570 ORTHO05D004207 7.0e-128 462.2 642 48.9
Sopen05g008710 Solanum pennellii HOM05D003570 ORTHO05D004207 2.7e-127 460.3 652 47.5
AUR62024231 Chenopodium quinoa HOM05D003570 ORTHO05D004207 4.5e-127 459.5 651 47.2
VMungo1383G2895 Vigna mungo HOM05D003570 ORTHO05D004207 2.3e-126 457.2 644 49.8
Atru.chr11.2174 Acer truncatum HOM05D003570 ORTHO05D004207 8.6e-126 455.3 654 49.4
THA.LOC104805269 Tarenaya hassleriana HOM05D003570 ORTHO05D004207 8.6e-126 455.3 648 48.5
Cpa.g.sc13.88 Carica papaya HOM05D003570 ORTHO05D004207 2.5e-125 453.8 681 46.4
Peaxi162Scf00128g00550 Petunia axillaris HOM05D003570 ORTHO05D004207 2.5e-125 453.8 646 49.2
MBI04_g13681_MAGBIO Magnolia biondii HOM05D003570 ORTHO05D004207 5.6e-125 452.6 660 46.4
arahy.Tifrunner.gnm1.ann1.I1BHDP Arachis hypogaea HOM05D003570 ORTHO05D004207 3.6e-124 449.9 669 46.0
arahy.Tifrunner.gnm1.ann1.8897EQ Arachis hypogaea HOM05D003570 ORTHO05D004207 1.0e-123 448.4 668 45.8
CsaV3_5G030790 Cucumis sativus L. HOM05D003570 ORTHO05D004207 1.8e-123 447.6 647 47.4
Ca_25131_v3 Cicer arietinum L. HOM05D001269 ORTHO05D001083 2.3e-123 447.2 631 48.7
Psat5g092360 Pisum sativum HOM05D003570 ORTHO05D004207 5.2e-123 446.0 653 47.2
Glyma.11G244100 Glycine max HOM05D003570 ORTHO05D004207 8.9e-123 445.3 646 48.9
Phvul.001G256000 Phaseolus vulgaris HOM05D003570 ORTHO05D004207 2.9e-121 440.3 652 48.6
ClCG05G026050 Citrullus lanatus HOM05D003570 ORTHO05D004207 3.0e-118 430.3 646 46.9
HanXRQChr08g0208421 Helianthus annuus HOM05D003570 ORTHO05D004207 2.8e-116 423.7 636 46.5
Oeu038645.2 Olea europaea HOM05D003570 ORTHO05D004207 6.2e-116 422.5 681 46.0
Sed0006332 Sechium edule HOM05D003570 ORTHO05D004207 8.0e-116 422.2 591 49.6
Lj4g0018208 Lotus japonicus HOM05D003570 ORTHO05D004207 3.1e-115 420.2 645 49.6
RcHm_v2.0_Chr4g0432651 Rosa chinensis HOM05D003570 ORTHO05D004207 5.2e-115 419.5 658 46.4
DCAR_026498 Daucus carota HOM05D003570 ORTHO05D004207 2.0e-114 417.5 677 44.9
TPR.G35967 Trifolium pratense HOM05D003570 ORTHO05D004207 2.0e-114 417.5 643 46.5
Lj6g0027950 Lotus japonicus HOM05D003570 ORTHO05D004207 1.7e-113 414.5 652 49.7
Medtr3g086460 Medicago truncatula HOM05D003570 ORTHO05D004207 2.2e-113 414.1 623 46.5
Lj6A815G40 Lonicera japonica HOM05D003570 ORTHO05D004207 4.9e-113 412.9 475 52.8
Nitab4.5_0004117g0010 Nicotiana tabacum HOM05D003570 ORTHO05D004207 4.9e-113 412.9 647 43.9
Nitab4.5_0001978g0070 Nicotiana tabacum HOM05D003570 ORTHO05D004207 6.4e-113 412.5 704 40.2
FAN12G2286 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.1e-112 411.8 656 44.7
MSTRG.553 Avicennia marina HOM05D003570 ORTHO05D004207 1.9e-112 411.0 643 45.9
FAN22G0389 Fragaria x ananassa HOM05D003570 ORTHO05D004207 7.0e-112 409.1 656 45.1
MD13G1104500 Malus domestica HOM05D003570 ORTHO05D004207 9.2e-112 408.7 581 50.3
FvH4_4g25360 Fragaria vesca HOM05D003570 ORTHO05D004207 1.2e-111 408.3 656 44.8
Migut.K00625 Erythranthe guttata HOM05D003570 ORTHO05D004207 3.5e-111 406.8 648 47.4
MELO3C011924.2 Cucumis melo HOM05D003570 ORTHO05D004207 1.3e-110 404.8 670 43.4
FAN07G1326 Fragaria x ananassa HOM05D003570 ORTHO05D004207 3.3e-109 400.2 680 41.9
ATR0824G009 Amborella trichopoda HOM05D003570 ORTHO05D004207 9.5e-109 398.7 619 43.0
AUR62005511 Chenopodium quinoa HOM05D003570 ORTHO05D004207 2.8e-108 397.1 659 42.3
Lsat_1_v5_gn_0_32260 Lactuca sativa HOM05D003570 ORTHO05D004207 1.1e-107 395.2 666 40.1
COL.COLO4_27904 Corchorus olitorius HOM05D003570 ORTHO05D004207 1.8e-107 394.4 679 40.2
Lalb_Chr08g0230861 Lupinus albus HOM05D003570 ORTHO05D004207 6.8e-107 392.5 547 49.4
Cc11_g16040 Coffea canephora HOM05D003570 ORTHO05D004207 1.5e-106 391.3 654 45.7
QL03p056953 Quercus lobata HOM05D003570 ORTHO05D004207 2.6e-106 390.6 635 47.1
SGA_v2.0_scaffold22G09799 Striga asiatica HOM05D003570 ORTHO05D004207 2.4e-104 384.0 647 43.4
FAN17G0862 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.7e-103 380.6 654 40.7
ECA233G5166 Erigeron canadensis HOM05D002671 ORTHO05D002985 2.3e-102 377.5 550 44.7
AL1G24790 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 4.9e-97 359.8 647 43.7
Lj3A151T25 Lonicera japonica HOM05D003570 ORTHO05D004207 2.4e-96 357.5 309 55.3
EL10As2g23162 Beta vulgaris HOM05D003570 ORTHO05D004207 2.1e-95 354.4 483 47.0
SEGI_05718 Sequoiadendron giganteum HOM05D003570 ORTHO05D004207 2.7e-95 354.0 624 42.0
AT1G13120 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 8.7e-94 349.0 639 43.0
BraA09t41684Z Brassica rapa HOM05D003570 ORTHO05D004207 8.7e-94 349.0 650 40.9
BolC8t52217H Brassica oleracea HOM05D003570 ORTHO05D004207 1.1e-93 348.6 650 43.2
CARHR013490 Cardamine hirsuta HOM05D003570 ORTHO05D004207 5.8e-90 336.3 645 43.3
C08p46780 Brassica napus HOM05D003570 ORTHO05D004207 9.9e-90 335.5 647 42.0
BcaC07g41664 Brassica carinata HOM05D003570 ORTHO05D004207 3.8e-89 333.6 650 43.4
A09p63350 Brassica napus HOM05D003570 ORTHO05D004207 3.2e-88 330.5 651 43.0
Sabra08G0139700 Salix brachista HOM05D003570 ORTHO05D004207 1.2e-87 328.6 318 54.1
Carub.0001s1286 Capsella rubella HOM05D003570 ORTHO05D004207 6.0e-87 326.2 643 40.1
Thhalv10007079m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 6.0e-87 326.2 624 44.2
Aqoxy5G03688 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 8.7e-86 322.4 236 65.3
CiPaw.02G032100 Carya illinoinensis HOM05D003570 ORTHO05D004207 1.5e-85 321.6 642 41.7
Os02g0596100 Oryza sativa ssp. japonica HOM05D003570 ORTHO05D004207 1.4e-83 315.1 656 41.0
Zm00001eb212370 Zea mays HOM05D003570 ORTHO05D004207 5.3e-83 313.2 539 42.9
PGSC0003DMG400016968 Solanum tuberosum HOM05D003570 ORTHO05D004207 2.2e-81 307.8 264 57.2
Hma1.2p1_1533F.1_g289360 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 4.9e-81 306.6 264 58.7
Aa31LG1G1680 Aethionema arabicum HOM05D003570 ORTHO05D004207 6.4e-81 306.2 621 42.2
Zm00001eb062020 Zea mays HOM05D003570 ORTHO05D004207 5.4e-80 303.1 571 38.7
Oeu038646.1 Olea europaea HOM05D003570 ORTHO05D004207 3.5e-79 300.4 434 43.5
SHI04269 Sapria himalayana HOM05D003570 ORTHO05D004207 7.9e-79 299.3 530 38.5
Aqoxy1G03220 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 6.2e-76 289.7 310 51.6
Sp1g11650 Schrenkiella parvula HOM05D003570 ORTHO05D004207 8.1e-76 289.3 642 35.7
Dinv15203 Davidia involucrata HOM05D003570 ORTHO05D004207 2.0e-74 284.6 225 64.0
Rhsim12G0108000 Rhododendron simsii HOM05D003570 ORTHO05D004207 5.5e-72 276.6 276 52.9
PSO063G3896 Papaver somniferum HOM05D003570 ORTHO05D004207 2.3e-70 271.2 239 75.3
vmacro17618 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 8.2e-68 262.7 550 38.5
Pp3c9_21420 Physcomitrium patens HOM05D003570 ORTHO05D004207 4.5e-66 256.9 625 33.1
vmacro16171 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 5.5e-64 250.0 243 53.9
Dinv11043 Davidia involucrata HOM05D003570 ORTHO05D004207 7.9e-63 246.1 466 41.2
Mapoly0004s0250 Marchantia polymorpha HOM05D003570 ORTHO05D004207 1.3e-60 238.8 614 35.0
AL6G47680 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 1.2e-58 232.3 614 34.2
SMO367G0645 Selaginella moellendorffii HOM05D003570 ORTHO05D004207 1.5e-58 231.9 646 31.1
Haze_20779 Corylus avellana HOM05D003570 ORTHO05D004207 6.1e-55 219.9 282 47.5
vmacro16173 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 7.9e-55 219.5 254 49.2
CBR_g38118 Chara braunii HOM05D003570 ORTHO05D004207 3.9e-54 217.2 685 33.6
Haze_11814 Corylus avellana HOM05D001314 ORTHO05D001165 6.5e-49 199.9 184 58.7
Thhalv10001133m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 3.0e-46 191.0 570 29.3
CDE06G1553 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 5.1e-46 190.3 172 53.5
CSS0045431 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 2.4e-43 181.4 152 61.8
Rhsim12G0107900 Rhododendron simsii HOM05D003570 ORTHO05D004207 2.3e-38 164.9 380 46.1
unitig_22.g6426 Utricularia gibba HOM05D003570 ORTHO05D004207 3.0e-38 164.5 184 45.7
FAN08G0154 Fragaria x ananassa HOM05D003570 ORTHO05D004207 3.5e-34 151.0 489 33.1
MCO05G059 Micromonas commoda HOM05D003570 ORTHO05D004207 1.0e-33 149.4 254 32.7
Sopen04g013730 Solanum pennellii HOM05D003570 ORTHO05D004207 3.8e-33 147.5 110 61.8
vmacro16170 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 2.7e-31 141.4 407 39.8
EL10Ac8g19584 Beta vulgaris HOM05D003570 ORTHO05D004207 6.1e-31 140.2 119 57.1
Nitab4.5_0000229g0040 Nicotiana tabacum HOM05D003570 ORTHO05D004207 1.8e-30 138.7 299 36.5
AagrBONN_evm.TU.Sc2ySwM_362.2178 Anthoceros agrestis HOM05D003570 ORTHO05D004207 5.2e-30 137.1 169 39.1
TAR374G0522 Trochodendron aralioides HOM05D003570 ORTHO05D004207 1.5e-29 135.6 98 63.3
Nitab4.5_0000229g0020 Nicotiana tabacum HOM05D003570 ORTHO05D004207 4.8e-28 130.6 250 38.8
Hma1.2p1_0054F.1_g030990 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 2.7e-26 124.8 81 69.1
Cre06.g300900 Chlamydomonas reinhardtii HOM05D003570 ORTHO05D004207 3.5e-26 124.4 301 30.2
Aqoxy5G03687 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 1.7e-25 122.1 249 36.1
AL2G22720 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 2.9e-25 121.3 139 50.4
Medtr7g034350 Medicago truncatula HOM05D003570 ORTHO05D004207 1.2e-23 115.9 187 39.6
vmacro16172 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 1.4e-22 112.5 453 34.2
PSO339G1213 Papaver somniferum HOM05D003570 ORTHO05D004207 2.3e-22 111.7 106 87.7
CDE06G0651 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 2.0e-21 108.6 258 39.9
FAN08G3485 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.6e-21 108.2 123 45.5
FAN13G1935 Fragaria x ananassa HOM05D003570 ORTHO05D004207 4.4e-21 107.5 395 37.0
TAR374G0931 Trochodendron aralioides HOM05D003570 ORTHO05D004207 7.5e-21 106.7 91 58.2
AagrBONN_evm.TU.Sc2ySwM_344.4464 Anthoceros agrestis HOM05D003570 ORTHO05D004207 2.2e-20 105.1 529 30.8
BolC5t29767H Brassica oleracea HOM05D003570 ORTHO05D004207 2.2e-20 105.1 204 32.8
CSS0031984 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 2.2e-20 105.1 242 34.3
BcaC05g25084 Brassica carinata HOM05D003570 ORTHO05D004207 7.0e-19 100.1 204 34.3
Hma1.2p1_1533F.1_g289350 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 1.3e-17 95.9 159 41.5
Lj3A151T24 Lonicera japonica HOM05D003570 ORTHO05D004207 6.6e-17 93.6 137 41.6
Glyma.18G013000 Glycine max HOM05D003570 ORTHO05D004207 8.6e-17 93.2 79 53.2
FvH4_5g15750 Fragaria vesca HOM05D003570 ORTHO05D004207 2.3e-14 85.1 72 62.5
BcaC05g25085 Brassica carinata HOM05D003570 ORTHO05D004207 3.0e-14 84.7 232 33.6
Actinidia15112 Actinidia chinensis HOM05D003570 ORTHO05D004207 2.0e-13 82.0 77 55.8
MD05G1151500 Malus domestica HOM05D003570 ORTHO05D004207 1.7e-12 79.0 81 54.3
Sp2g10400 Schrenkiella parvula HOM05D003570 ORTHO05D004207 3.7e-12 77.8 108 40.7
AT4G05523 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 4.9e-12 77.4 202 33.7
Actinidia15111 Actinidia chinensis HOM05D003570 ORTHO05D004207 1.8e-11 75.5 71 52.1
EL10As2g23164 Beta vulgaris HOM05D003570 ORTHO05D004207 4.1e-11 74.3 160 36.2
unitig_22.g6425 Utricularia gibba HOM05D003570 ORTHO05D004207 4.1e-11 74.3 219 33.8
C05p10220 Brassica napus HOM05D003570 ORTHO05D004207 1.6e-10 72.4 114 34.2
A07p19900 Brassica napus HOM05D003570 ORTHO05D004207 3.5e-10 71.2 214 29.0
BolC4t26878H Brassica oleracea HOM05D003570 ORTHO05D004207 3.5e-10 71.2 214 31.8
EL10Ac1g01653 Beta vulgaris HOM05D003570 ORTHO05D004207 1.3e-09 69.3 49 63.3
PSO063G0840 Papaver somniferum HOM05D009926 ORTHO05D002449 2.9e-09 68.2 34 97.1
BcaC02g08536 Brassica carinata HOM05D003570 ORTHO05D004207 5.0e-09 67.4 181 33.1
BcaC06g34341 Brassica carinata HOM05D003570 ORTHO05D004207 5.6e-08 63.9 207 27.1
A07p18160 Brassica napus HOM05D003570 ORTHO05D004207 9.5e-08 63.2 207 26.6
BraA01t00580Z Brassica rapa HOM05D003570 ORTHO05D004207 9.5e-08 63.2 207 26.6
C04p53310 Brassica napus HOM05D003570 ORTHO05D004207 4.7e-07 60.8 217 30.4
AL2G22730 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 2.3e-06 58.5 109 38.5


User provided reference genes

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