Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G1979 Papaver somniferum HOM05D004644 ORTHO05D005700 0.0e+00 1172.9 607 100.0
PSO801G0701 Papaver somniferum HOM05D004644 ORTHO05D005700 4.5e-192 675.2 348 94.5
TAR633G1934 Trochodendron aralioides HOM05D004644 ORTHO05D005700 5.8e-163 578.6 547 53.9
Aqoxy2G01714 Aquilegia oxysepala HOM05D004644 ORTHO05D005700 3.2e-161 572.8 505 57.0
QL08p054123 Quercus lobata HOM05D004644 ORTHO05D005700 6.0e-136 488.8 573 46.2
Dinv35798 Davidia involucrata HOM05D004644 ORTHO05D005700 1.6e-133 480.7 560 48.6
GSVIVG01033660001 Vitis vinifera HOM05D004644 ORTHO05D005700 1.0e-130 471.5 547 46.8
CSS0046520 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 2.9e-130 469.9 557 47.2
Actinidia28913 Actinidia chinensis HOM05D004644 ORTHO05D005700 7.1e-129 465.3 549 45.4
Sabra06G0097000 Salix brachista HOM05D004644 ORTHO05D005700 1.2e-128 464.5 533 48.0
Lj2C119G5 Lonicera japonica HOM05D004644 ORTHO05D005700 4.6e-128 462.6 539 46.2
MD12G1109200 Malus domestica HOM05D004644 ORTHO05D005700 3.0e-127 459.9 517 46.2
Oeu045234.3 Olea europaea HOM05D004644 ORTHO05D005700 1.1e-126 458.0 525 47.2
Rhsim03G0090100 Rhododendron simsii HOM05D004644 ORTHO05D005700 3.3e-126 456.4 564 47.2
Potri.006G122800 Populus trichocarpa HOM05D004644 ORTHO05D005700 9.6e-126 454.9 537 46.6
Potri.010G228000 Populus trichocarpa HOM05D004644 ORTHO05D005700 9.6e-126 454.9 537 45.4
Atru.chr8.1780 Acer truncatum HOM05D004644 ORTHO05D005700 9.0e-124 448.4 551 46.1
COL.COLO4_26937 Corchorus olitorius HOM05D004644 ORTHO05D005700 3.4e-123 446.4 599 42.9
FAN09G2255 Fragaria x ananassa HOM05D004644 ORTHO05D005700 1.0e-122 444.9 540 44.4
FvH4_6g16560 Fragaria vesca HOM05D004644 ORTHO05D005700 1.3e-122 444.5 539 45.6
Duzib093G1101 Durio zibethinus HOM05D004644 ORTHO05D005700 2.2e-122 443.7 572 44.8
FAN05G3668 Fragaria x ananassa HOM05D004644 ORTHO05D005700 2.9e-122 443.4 540 44.4
FAN05G5479 Fragaria x ananassa HOM05D004644 ORTHO05D005700 8.4e-122 441.8 540 44.3
Phvul.001G180000 Phaseolus vulgaris HOM05D004644 ORTHO05D005700 8.4e-122 441.8 569 43.1
TWI53G0078 Tripterygium wilfordii HOM05D004644 ORTHO05D005700 1.9e-121 440.7 560 45.4
RcHm_v2.0_Chr3g0470481 Rosa chinensis HOM05D004644 ORTHO05D005700 9.3e-121 438.3 508 46.1
Gohir.A09G145300 Gossypium hirsutum HOM05D004644 ORTHO05D005700 1.2e-120 438.0 561 45.1
Prupe.7G127800 Prunus persica HOM05D004644 ORTHO05D005700 1.0e-119 434.9 569 42.5
Sopen09g003150 Solanum pennellii HOM05D004644 ORTHO05D005700 1.8e-119 434.1 571 42.6
EL10Ac7g16657 Beta vulgaris HOM05D004644 ORTHO05D005700 2.3e-119 433.7 557 43.1
Gohir.D09G141400 Gossypium hirsutum HOM05D004644 ORTHO05D005700 3.0e-119 433.3 560 43.8
Gorai.006G162300 Gossypium raimondii HOM05D004644 ORTHO05D005700 3.0e-119 433.3 560 43.6
MBI18_g00904_MAGBIO Magnolia biondii HOM05D004644 ORTHO05D005700 6.7e-119 432.2 486 48.4
QL07p043006 Quercus lobata HOM05D004644 ORTHO05D005700 3.3e-118 429.9 523 45.7
vmacro07303 Vaccinium macrocarpon HOM05D004644 ORTHO05D005700 5.7e-118 429.1 594 42.8
Prupe.2G207900 Prunus persica HOM05D004644 ORTHO05D005700 7.4e-118 428.7 525 45.5
Lalb_Chr20g0112551 Lupinus albus HOM05D004644 ORTHO05D005700 2.8e-117 426.8 512 45.3
TPR.G32811 Trifolium pratense HOM05D004644 ORTHO05D005700 2.8e-117 426.8 544 43.0
Cfa017634 Carpinus fangiana HOM05D004644 ORTHO05D005700 1.8e-116 424.1 556 43.9
FAN02G4433 Fragaria x ananassa HOM05D004644 ORTHO05D005700 1.8e-116 424.1 547 44.6
DCAR_009308 Daucus carota HOM05D004644 ORTHO05D005700 3.4e-115 419.9 510 43.7
Manes.07G133120 Manihot esculenta HOM05D004644 ORTHO05D005700 1.3e-114 417.9 495 46.5
Lj1g0025951 Lotus japonicus HOM05D004644 ORTHO05D005700 2.1e-112 410.6 587 40.7
Sc02g0001570 Simmondsia chinensis HOM05D004644 ORTHO05D005700 7.9e-112 408.7 566 41.7
THA.LOC104816355 Tarenaya hassleriana HOM05D004644 ORTHO05D005700 7.9e-112 408.7 558 41.6
Solyc09g008330.3 Solanum lycopersicum HOM05D004644 ORTHO05D005700 5.1e-111 406.0 551 41.6
MELO3C024470.2 Cucumis melo HOM05D004644 ORTHO05D005700 2.0e-110 404.1 544 41.5
PGR004G1497 Punica granatum HOM05D004644 ORTHO05D005700 3.3e-110 403.3 521 44.0
MSTRG.5768 Avicennia marina HOM05D004644 ORTHO05D005700 1.7e-109 401.0 544 41.4
HanXRQChr14g0432961 Helianthus annuus HOM05D004644 ORTHO05D005700 4.8e-109 399.4 537 43.0
AUR62026918 Chenopodium quinoa HOM05D004644 ORTHO05D005700 8.2e-109 398.7 539 41.7
CsaV3_6G039930 Cucumis sativus L. HOM05D004644 ORTHO05D005700 8.2e-109 398.7 544 41.9
FAN14G1031 Fragaria x ananassa HOM05D004644 ORTHO05D005700 1.4e-108 397.9 510 45.7
Eucgr.A01659 Eucalyptus grandis HOM05D004644 ORTHO05D005700 3.1e-108 396.7 554 40.3
CARHR209890 Cardamine hirsuta HOM05D004644 ORTHO05D005700 1.2e-107 394.8 546 43.2
Glyma.03G184600 Glycine max HOM05D004644 ORTHO05D005700 2.0e-107 394.0 561 39.6
ECA238G2777 Erigeron canadensis HOM05D004644 ORTHO05D005700 2.6e-107 393.7 516 43.0
Medtr7g102280 Medicago truncatula HOM05D004644 ORTHO05D005700 4.5e-107 392.9 510 41.0
arahy.Tifrunner.gnm1.ann1.W70S5M Arachis hypogaea HOM05D004644 ORTHO05D005700 1.0e-106 391.7 546 40.7
Psat3g041720 Pisum sativum HOM05D004644 ORTHO05D005700 1.0e-106 391.7 524 41.2
AUR62042062 Chenopodium quinoa HOM05D004644 ORTHO05D005700 2.2e-106 390.6 539 41.0
Zm00001eb393970 Zea mays HOM05D004644 ORTHO05D005700 3.8e-106 389.8 508 42.7
Sed0011501 Sechium edule HOM05D004644 ORTHO05D005700 6.5e-106 389.0 515 41.0
Lsat_1_v5_gn_2_30721 Lactuca sativa HOM05D004644 ORTHO05D005700 3.2e-105 386.7 553 40.9
ClCG04G009350 Citrullus lanatus HOM05D004644 ORTHO05D005700 1.8e-103 380.9 542 39.9
VMungo1383G2434 Vigna mungo HOM05D004644 ORTHO05D005700 1.8e-103 380.9 558 39.6
Sp6g39290 Schrenkiella parvula HOM05D004644 ORTHO05D005700 6.7e-103 379.0 545 41.3
AL6G12810 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 2.0e-102 377.5 547 40.8
Lj1g0007058 Lotus japonicus HOM05D004644 ORTHO05D005700 2.2e-101 374.0 562 39.5
BcaB05g21841 Brassica carinata HOM05D004644 ORTHO05D005700 1.4e-100 371.3 546 40.3
Zm00001eb393990 Zea mays HOM05D004644 ORTHO05D005700 2.0e-99 367.5 508 41.7
Carub.0006s0226 Capsella rubella HOM05D004644 ORTHO05D005700 7.7e-99 365.5 550 40.4
Os10g0545600 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 7.7e-99 365.5 510 39.8
Ca_08912_v3 Cicer arietinum L. HOM05D004644 ORTHO05D005700 1.3e-98 364.8 516 40.3
BraA02t04761Z Brassica rapa HOM05D004644 ORTHO05D005700 1.7e-98 364.4 528 39.8
Nitab4.5_0000578g0020 Nicotiana tabacum HOM05D004644 ORTHO05D005700 2.9e-98 363.6 534 41.6
AT5G03450 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 8.5e-98 362.1 547 39.9
BolC2t06098H Brassica oleracea HOM05D004644 ORTHO05D005700 8.5e-98 362.1 539 39.0
Zm00001eb000650 Zea mays HOM05D004644 ORTHO05D005700 3.6e-96 356.7 508 40.2
C02p01080 Brassica napus HOM05D004644 ORTHO05D005700 3.0e-95 353.6 544 38.8
Migut.J00643 Erythranthe guttata HOM05D004644 ORTHO05D005700 5.3e-92 342.8 472 41.7
Cpa.g.sc102.18 Carica papaya HOM05D004644 ORTHO05D005700 2.6e-91 340.5 353 49.6
Cc06_g04370 Coffea canephora HOM05D004644 ORTHO05D005700 1.6e-88 331.3 388 47.9
MD01G1102300 Malus domestica HOM05D004644 ORTHO05D005700 2.7e-88 330.5 310 55.2
PGSC0003DMG401003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 8.0e-88 328.9 343 49.3
Thhalv10013047m.g Eutrema salsugineum HOM05D004644 ORTHO05D005700 1.8e-87 327.8 555 38.6
Aa31LG1G21710 Aethionema arabicum HOM05D004644 ORTHO05D005700 1.5e-86 324.7 378 46.0
SGA_v2.0_scaffold75G24833 Striga asiatica HOM05D004644 ORTHO05D005700 2.2e-85 320.9 582 36.3
Peaxi162Scf00722g00210 Petunia axillaris HOM05D004644 ORTHO05D005700 2.9e-82 310.5 487 40.2
SGA_v2.0_scaffold40G15487 Striga asiatica HOM05D004644 ORTHO05D005700 7.2e-81 305.8 513 36.8
CARHR209550 Cardamine hirsuta HOM05D004644 ORTHO05D005700 6.1e-80 302.8 525 35.2
unitig_8.g4114 Utricularia gibba HOM05D004644 ORTHO05D005700 2.8e-77 293.9 567 33.2
Manes.09G065000 Manihot esculenta HOM05D004644 ORTHO05D005700 3.7e-77 293.5 385 43.4
Nitab4.5_0004476g0040 Nicotiana tabacum HOM05D004644 ORTHO05D005700 6.3e-77 292.7 459 40.5
ATR0763G089 Amborella trichopoda HOM05D004644 ORTHO05D005700 2.0e-75 287.7 310 50.0
Mapoly0033s0098 Marchantia polymorpha HOM05D004644 ORTHO05D005700 2.7e-75 287.3 624 33.0
Haze_20518 Corylus avellana HOM05D004644 ORTHO05D005700 2.5e-73 280.8 412 41.5
Thecc.05G069300 Theobroma cacao HOM05D004644 ORTHO05D005700 1.2e-72 278.5 375 44.3
CSS0030902 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 1.3e-69 268.5 254 53.5
Pp3c22_3930 Physcomitrium patens HOM05D004644 ORTHO05D005700 2.5e-65 254.2 660 29.7
CiPaw.09G171100 Carya illinoinensis HOM05D004644 ORTHO05D005700 1.2e-64 251.9 245 53.9
CDE02G0420 Ceratophyllum demersum HOM05D004644 ORTHO05D005700 2.1e-64 251.1 342 41.8
AL6G13290 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 5.4e-60 236.5 405 36.3
Actinidia26658 Actinidia chinensis HOM05D004644 ORTHO05D005700 1.9e-57 228.0 247 47.4
CBR_g31861 Chara braunii HOM05D004644 ORTHO05D005700 1.4e-39 168.7 711 24.2
CSS0001913 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 2.4e-36 157.9 118 61.0
Haze_20519 Corylus avellana HOM05D004644 ORTHO05D005700 7.3e-33 146.4 153 49.7
Nn2g13824 Nelumbo nucifera HOM05D004644 ORTHO05D005700 1.6e-32 145.2 145 53.1
arahy.Tifrunner.gnm1.ann1.K7JVCN Arachis hypogaea HOM05D004644 ORTHO05D005700 4.2e-28 130.6 297 30.6
PGSC0003DMG402003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 1.7e-26 125.2 137 47.4
Lj3C987G12 Lonicera japonica HOM05D004644 ORTHO05D005700 2.3e-26 124.8 127 50.4
SEGI_40598 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 2.3e-26 124.8 168 40.5
PSO801G0041 Papaver somniferum HOM05D004644 ORTHO05D005700 3.9e-26 124.0 139 42.4
ECA233G2118 Erigeron canadensis HOM05D004644 ORTHO05D005700 5.1e-26 123.6 120 47.5
Atru.chr8.1778 Acer truncatum HOM05D004644 ORTHO05D005700 3.3e-25 120.9 126 44.4
MCO15G141 Micromonas commoda HOM05D004644 ORTHO05D005700 3.3e-25 120.9 482 26.6
HanXRQChr13g0400851 Helianthus annuus HOM05D004644 ORTHO05D005700 4.3e-25 120.6 131 45.8
PSO339G3403 Papaver somniferum HOM05D004644 ORTHO05D005700 2.1e-24 118.2 142 40.1
Lsat_1_v5_gn_6_24500 Lactuca sativa HOM05D004644 ORTHO05D005700 4.8e-24 117.1 134 44.0
Atru.chr8.1779 Acer truncatum HOM05D004644 ORTHO05D005700 1.1e-23 115.9 117 46.2
Cpa.g.sc102.17 Carica papaya HOM05D004644 ORTHO05D005700 2.4e-23 114.8 145 38.6
Glyma.19G185000 Glycine max HOM05D004644 ORTHO05D005700 4.0e-23 114.0 94 50.0
Cc06_g04380 Coffea canephora HOM05D004644 ORTHO05D005700 9.0e-23 112.8 85 52.9
MD01G1102200 Malus domestica HOM05D004644 ORTHO05D005700 1.5e-22 112.1 88 55.7
Sabra10G0176300 Salix brachista HOM05D004644 ORTHO05D005700 7.6e-22 109.8 129 43.4
Lsat_1_v5_gn_6_24480 Lactuca sativa HOM05D004644 ORTHO05D005700 6.4e-21 106.7 121 39.7
PSO801G0518 Papaver somniferum HOM05D004644 ORTHO05D005700 8.4e-21 106.3 114 44.7
Sc02g0001560 Simmondsia chinensis HOM05D004644 ORTHO05D005700 8.4e-21 106.3 115 41.7
Prupe.7G127600 Prunus persica HOM05D004644 ORTHO05D005700 5.5e-20 103.6 89 46.1
PGR004G0361 Punica granatum HOM05D004644 ORTHO05D005700 1.3e-18 99.0 86 57.0
Sabra10G0175900 Salix brachista HOM05D004644 ORTHO05D005700 3.0e-18 97.8 95 51.6
PGR004G0952 Punica granatum HOM05D004644 ORTHO05D005700 1.5e-17 95.5 86 55.8
HanXRQChr02g0051711 Helianthus annuus HOM05D004644 ORTHO05D005700 3.7e-16 90.9 68 51.5
ATR0763G245 Amborella trichopoda HOM05D004644 ORTHO05D005700 2.4e-15 88.2 73 47.9
Os03g0108200 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 2.0e-14 85.1 126 31.0
SEGI_17091 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 2.0e-14 85.1 201 32.8
Atru.chr8.1774 Acer truncatum HOM05D004644 ORTHO05D005700 3.4e-14 84.3 84 47.6
COL.COLO4_26936 Corchorus olitorius HOM05D004644 ORTHO05D005700 2.2e-13 81.6 111 39.6
MD12G1109100 Malus domestica HOM05D004644 ORTHO05D005700 2.5e-12 78.2 111 36.9
FvH4_7g08751 Fragaria vesca HOM05D004644 ORTHO05D005700 1.6e-11 75.5 110 36.4
AT5G03750 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 1.3e-08 65.9 47 55.3
SEGI_22440 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.6e-08 65.5 45 48.9
ECA232G2196 Erigeron canadensis HOM05D004644 ORTHO05D005700 3.7e-08 64.3 75 42.7
Glyma.18G219501 Glycine max HOM05D000076 ORTHO05D005700 1.1e-07 62.8 62 53.2
Glyma.07G162100 Glycine max HOM05D003568 ORTHO05D004104 2.6e-06 58.2 57 52.6
Glyma.16G032000 Glycine max HOM05D004687 ORTHO05D006002 5.9e-06 57.0 108 26.9
SEGI_00616 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 7.6e-06 56.6 107 29.9


User provided reference genes

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