Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 4.0e-70 268.1 144 100.0
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 1.2e-66 256.5 149 94.6
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 2.4e-35 152.5 113 69.0
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 1.9e-32 142.9 142 58.5
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 4.3e-32 141.7 147 59.2
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 9.5e-32 140.6 118 64.4
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 1.2e-31 140.2 148 58.8
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 1.2e-31 140.2 145 56.6
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 3.6e-31 138.7 119 64.7
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 4.7e-31 138.3 145 57.9
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 6.2e-31 137.9 145 55.2
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 1.1e-30 137.1 135 57.8
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 1.1e-30 137.1 148 56.8
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 1.4e-30 136.7 118 65.3
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 3.1e-30 135.6 116 65.5
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 6.8e-30 134.4 145 57.9
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 6.8e-30 134.4 146 58.9
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 8.9e-30 134.0 145 57.2
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 1.2e-29 133.7 144 54.9
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 1.5e-29 133.3 121 62.0
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 1.5e-29 133.3 145 57.2
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 3.4e-29 132.1 146 55.5
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 5.8e-29 131.3 146 58.9
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 5.8e-29 131.3 146 53.4
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 7.6e-29 131.0 120 60.8
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 9.9e-29 130.6 144 54.9
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 9.9e-29 130.6 126 59.5
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 1.3e-28 130.2 120 60.8
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 1.3e-28 130.2 146 58.9
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 1.7e-28 129.8 148 56.8
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 2.2e-28 129.4 150 56.0
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 4.9e-28 128.3 135 57.8
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 6.4e-28 127.9 151 55.6
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 6.4e-28 127.9 122 62.3
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 6.4e-28 127.9 116 61.2
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 1.1e-27 127.1 119 60.5
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 1.4e-27 126.7 145 55.2
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 1.4e-27 126.7 144 54.9
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 1.4e-27 126.7 147 54.4
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 4.1e-27 125.2 138 56.5
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 9.2e-27 124.0 118 61.9
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 9.2e-27 124.0 144 55.6
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 1.2e-26 123.6 137 54.7
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 1.2e-26 123.6 141 55.3
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 1.2e-26 123.6 146 53.4
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 1.6e-26 123.2 145 55.9
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 1.6e-26 123.2 87 73.6
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 2.7e-26 122.5 114 63.2
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 2.7e-26 122.5 141 51.8
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 3.5e-26 122.1 146 55.5
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 3.5e-26 122.1 109 60.6
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 3.5e-26 122.1 116 59.5
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 4.6e-26 121.7 151 52.3
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 4.6e-26 121.7 145 52.4
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 4.6e-26 121.7 122 54.1
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 6.0e-26 121.3 144 54.9
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 6.0e-26 121.3 114 60.5
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 6.0e-26 121.3 114 62.3
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 7.8e-26 120.9 104 62.5
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 7.8e-26 120.9 87 72.4
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 1.0e-25 120.6 149 55.7
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 1.3e-25 120.2 142 56.3
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 1.3e-25 120.2 148 52.7
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 1.3e-25 120.2 89 68.5
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 1.7e-25 119.8 150 53.3
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 3.0e-25 119.0 114 60.5
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 3.9e-25 118.6 121 59.5
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 3.9e-25 118.6 125 50.4
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 6.6e-25 117.9 151 51.7
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 6.6e-25 117.9 151 51.7
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 6.6e-25 117.9 144 54.2
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 8.7e-25 117.5 126 57.1
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 1.5e-24 116.7 148 54.1
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 1.9e-24 116.3 108 57.4
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 1.9e-24 116.3 145 56.6
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 1.9e-24 116.3 105 60.0
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 1.9e-24 116.3 132 53.8
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 2.5e-24 115.9 150 51.3
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 3.3e-24 115.5 133 53.4
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 3.3e-24 115.5 140 52.1
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 7.3e-24 114.4 151 50.3
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 7.3e-24 114.4 145 51.7
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 7.3e-24 114.4 106 60.4
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 9.6e-24 114.0 151 50.3
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 9.6e-24 114.0 151 50.3
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 1.2e-23 113.6 120 59.2
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 2.1e-23 112.8 94 63.8
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 2.1e-23 112.8 82 70.7
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 2.1e-23 112.8 80 71.2
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 3.6e-23 112.1 144 50.0
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 4.7e-23 111.7 149 50.3
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 8.1e-23 110.9 99 62.6
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 2.4e-22 109.4 120 58.3
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 6.9e-22 107.8 100 60.0
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 1.5e-21 106.7 93 59.1
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 2.0e-21 106.3 118 52.5
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 1.7e-20 103.2 106 54.7
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 2.9e-20 102.4 135 50.4
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 4.9e-20 101.7 118 49.2
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 1.9e-19 99.8 138 48.6
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 2.4e-19 99.4 78 66.7
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 6.0e-18 94.7 77 64.9
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 5.1e-17 91.7 91 53.8
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 8.7e-17 90.9 113 46.0
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 6.2e-15 84.7 55 81.8
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 1.8e-14 83.2 133 40.6
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 6.9e-14 81.3 118 44.9
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 6.9e-14 81.3 90 50.0
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 1.2e-13 80.5 110 47.3
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 1.3e-12 77.0 83 49.4
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 2.9e-12 75.9 81 50.6
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 2.9e-12 75.9 102 44.1
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 4.9e-12 75.1 84 45.2
SalBow6G4602 Salvia bowleyana HOM05D010989 ORTHO05D013112 1.8e-09 66.6 85 51.8
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 3.3e-08 62.4 110 44.5
COL.COLO4_15744 Corchorus olitorius HOM05D001416 ORTHO05D002549 1.8e-06 56.6 46 63.0


User provided reference genes

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