Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 2.9e-194 681.8 361 100.0
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 7.9e-192 673.7 361 98.6
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 4.8e-149 531.6 341 80.9
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 2.4e-148 529.3 344 81.7
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 2.5e-145 519.2 339 80.8
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 3.6e-144 515.4 350 77.1
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 1.4e-143 513.5 352 77.8
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 4.0e-143 511.9 339 79.1
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 7.5e-142 507.7 342 77.8
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 7.5e-142 507.7 350 76.3
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 1.3e-141 506.9 351 76.6
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 3.7e-141 505.4 339 77.9
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 4.8e-141 505.0 346 75.1
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 1.4e-140 503.4 350 76.6
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 7.0e-140 501.1 351 73.5
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 1.6e-139 500.0 346 76.3
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 2.0e-139 499.6 344 75.0
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 2.0e-139 499.6 353 74.2
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 2.0e-139 499.6 339 76.7
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 1.0e-138 497.3 341 76.0
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 2.2e-138 496.1 341 76.2
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 3.8e-138 495.4 345 74.2
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 3.8e-138 495.4 343 75.5
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 6.5e-138 494.6 341 75.7
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 1.9e-137 493.0 358 72.6
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 1.9e-137 493.0 351 74.9
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 1.9e-137 493.0 341 74.8
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 3.2e-137 492.3 341 75.4
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 9.4e-137 490.7 349 74.5
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 2.1e-136 489.6 352 73.9
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 2.7e-136 489.2 348 72.7
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 2.7e-136 489.2 348 72.7
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 4.7e-136 488.4 350 72.9
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 8.0e-136 487.6 342 75.4
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 1.0e-135 487.3 336 77.1
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 1.8e-135 486.5 353 72.5
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 4.0e-135 485.3 363 71.9
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 4.0e-135 485.3 360 71.4
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 5.2e-135 485.0 350 72.6
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 6.8e-135 484.6 363 73.6
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 1.5e-134 483.4 342 73.7
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 2.0e-134 483.0 340 75.0
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 4.4e-134 481.9 367 70.8
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 4.4e-134 481.9 362 71.3
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 5.7e-134 481.5 361 70.6
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 7.5e-134 481.1 341 74.8
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 7.5e-134 481.1 352 73.0
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 9.8e-134 480.7 358 72.3
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 1.3e-133 480.3 349 72.8
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 1.3e-133 480.3 352 73.0
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 3.7e-133 478.8 342 76.0
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 3.7e-133 478.8 340 74.1
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 4.8e-133 478.4 339 73.5
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 6.3e-133 478.0 340 73.8
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 6.3e-133 478.0 352 73.0
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 1.1e-132 477.2 339 74.9
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 1.1e-132 477.2 378 69.6
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 1.4e-132 476.9 365 70.1
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 1.8e-132 476.5 351 73.2
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 2.4e-132 476.1 378 69.6
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 4.1e-132 475.3 344 73.0
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 4.1e-132 475.3 352 72.7
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 7.0e-132 474.6 361 68.7
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 9.1e-132 474.2 354 72.6
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 1.6e-131 473.4 337 71.8
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 2.0e-131 473.0 337 72.1
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 3.5e-131 472.2 342 73.1
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 2.2e-130 469.5 348 70.1
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 2.2e-130 469.5 348 70.1
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 2.2e-130 469.5 348 70.1
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 2.2e-130 469.5 348 70.1
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 2.2e-130 469.5 343 72.0
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 2.2e-130 469.5 336 75.3
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 6.5e-130 468.0 350 70.0
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 6.5e-130 468.0 351 72.9
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 8.5e-130 467.6 348 71.3
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 1.9e-129 466.5 351 70.9
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 3.2e-129 465.7 352 70.5
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 7.2e-129 464.5 348 69.8
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 1.2e-128 463.8 352 69.9
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 3.0e-127 459.1 336 73.5
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 4.0e-127 458.8 339 72.3
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 2.0e-126 456.4 342 72.8
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 5.7e-126 454.9 332 72.9
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 1.2e-123 447.2 269 84.4
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 1.6e-123 446.8 298 79.2
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 1.7e-122 443.4 339 69.6
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 2.8e-120 436.0 339 69.0
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 3.0e-119 432.6 269 81.8
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 5.8e-110 401.7 341 61.3
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 6.0e-107 391.7 362 60.5
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 7.8e-107 391.3 335 61.2
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 1.2e-99 367.5 282 67.7
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 1.7e-98 363.6 342 57.3
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 4.9e-85 318.9 278 64.4
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 1.0e-82 311.2 247 69.6
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 1.3e-77 294.3 272 61.4
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 2.9e-77 293.1 248 64.5
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 4.8e-72 275.8 228 67.1
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 8.1e-72 275.0 350 46.6
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 8.7e-66 255.0 332 46.1
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 6.2e-64 248.8 314 46.8
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 3.2e-60 236.5 335 45.4
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 1.0e-58 231.5 363 44.1
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.3e-58 231.1 155 76.8
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 6.7e-58 228.8 190 64.7
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 1.3e-56 224.6 196 62.8
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 7.9e-51 205.3 185 62.7
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 1.6e-48 197.6 192 55.7
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 9.4e-44 181.8 143 69.2
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 9.7e-41 171.8 147 61.9
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 1.1e-39 168.3 265 43.0
SEGI_31254 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 6.9e-39 165.6 91 92.3
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.6e-33 147.1 118 66.9
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 8.8e-26 122.1 133 51.9
unitig_62.g23271 Utricularia gibba HOM05D006520 ORTHO05D008405 2.4e-23 114.0 66 86.4
CDE01G0120 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 3.8e-21 106.7 57 93.0
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 4.4e-17 93.2 133 48.1
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 7.5e-17 92.4 88 52.3
EL10Ac4g08085 Beta vulgaris HOM05D006520 ORTHO05D090166 1.3e-13 81.6 43 95.3
MD11G1224100 Malus domestica HOM05D006520 ORTHO05D008405 2.3e-13 80.9 46 87.0
Zm00001eb241410 Zea mays HOM05D006520 ORTHO05D442212 1.8e-07 61.2 50 60.0


User provided reference genes

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