Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G5509 Papaver somniferum HOM05D004448 ORTHO05D005919 8.2e-258 893.3 472 100.0
PSO210G3334 Papaver somniferum HOM05D004448 ORTHO05D005919 1.0e-239 833.2 471 93.6
Nn8g38906 Nelumbo nucifera HOM05D004448 ORTHO05D005919 7.3e-113 411.8 503 45.1
GSVIVG01015227001 Vitis vinifera HOM05D004448 ORTHO05D005919 1.6e-107 394.0 479 44.7
Aqoxy5G03492 Aquilegia oxysepala HOM05D004448 ORTHO05D005919 7.3e-105 385.2 415 55.7
MBI08_g34934_MAGBIO Magnolia biondii HOM05D004448 ORTHO05D005919 8.1e-104 381.7 399 51.4
Prupe.7G212600 Prunus persica HOM05D004448 ORTHO05D005919 2.3e-103 380.2 487 44.8
Actinidia25266 Actinidia chinensis HOM05D004448 ORTHO05D005919 3.1e-103 379.8 479 44.3
Dinv42301 Davidia involucrata HOM05D004448 ORTHO05D005919 2.0e-102 377.1 502 43.6
CSS0023607 Camellia sinensis var. sinensis HOM05D004448 ORTHO05D005919 2.6e-102 376.7 484 45.0
Dinv36750 Davidia involucrata HOM05D004448 ORTHO05D005919 2.6e-102 376.7 483 45.3
QL02p063021 Quercus lobata HOM05D004448 ORTHO05D005919 6.4e-101 372.1 500 43.2
FAN26G0987 Fragaria x ananassa HOM05D004448 ORTHO05D005919 1.2e-99 367.9 479 43.8
Cfa003108 Carpinus fangiana HOM05D004448 ORTHO05D005919 1.6e-99 367.5 469 44.8
FvH4_1g07151 Fragaria vesca HOM05D004448 ORTHO05D005919 6.0e-99 365.5 483 43.9
FAN26G2794 Fragaria x ananassa HOM05D004448 ORTHO05D005919 6.0e-99 365.5 483 43.5
Haze_25890 Corylus avellana HOM05D004448 ORTHO05D005919 3.3e-97 359.8 477 44.2
Rhsim05G0022900 Rhododendron simsii HOM05D004448 ORTHO05D005919 4.3e-97 359.4 508 40.6
ClCG03G015750 Citrullus lanatus HOM05D004448 ORTHO05D005919 5.6e-97 359.0 479 42.8
Sabra06G0118700 Salix brachista HOM05D004448 ORTHO05D005919 9.5e-97 358.2 490 42.7
RcHm_v2.0_Chr2g0093041 Rosa chinensis HOM05D004448 ORTHO05D005919 2.8e-96 356.7 482 42.7
AUR62031324 Chenopodium quinoa HOM05D004448 ORTHO05D005919 9.9e-94 348.2 475 42.9
TWI32G1061 Tripterygium wilfordii HOM05D004448 ORTHO05D005919 3.8e-93 346.3 477 41.9
Cc06_g11170 Coffea canephora HOM05D004448 ORTHO05D005919 1.4e-92 344.4 499 39.7
AUR62027409 Chenopodium quinoa HOM05D004448 ORTHO05D005919 1.6e-91 340.9 477 43.4
Potri.006G150000 Populus trichocarpa HOM05D004448 ORTHO05D005919 3.5e-91 339.7 490 41.6
Hma1.2p1_0663F.1_g198910 Hydrangea macrophylla HOM05D004448 ORTHO05D005919 2.3e-90 337.0 453 43.7
Oeu024590.1 Olea europaea HOM05D004448 ORTHO05D005919 3.0e-90 336.7 416 44.7
EL10Ac8g19309 Beta vulgaris HOM05D004448 ORTHO05D005919 5.1e-90 335.9 465 43.2
CANSAT56G0950 Cannabis sativa HOM05D004448 ORTHO05D005919 1.9e-89 334.0 414 44.2
Phvul.004G171600 Phaseolus vulgaris HOM05D004448 ORTHO05D005919 5.6e-89 332.4 470 41.9
Nitab4.5_0000713g0030 Nicotiana tabacum HOM05D004448 ORTHO05D005919 7.3e-89 332.0 482 39.4
vmacro17218 Vaccinium macrocarpon HOM05D004448 ORTHO05D005919 1.2e-88 331.3 456 41.2
COL.COLO4_18221 Corchorus olitorius HOM05D004448 ORTHO05D005919 1.6e-88 330.9 484 40.5
CiPaw.03G218000 Carya illinoinensis HOM05D004448 ORTHO05D005919 2.1e-88 330.5 467 43.0
Manes.03G032000 Manihot esculenta HOM05D004448 ORTHO05D005919 2.1e-88 330.5 483 41.2
CDE09G0006 Ceratophyllum demersum HOM05D004448 ORTHO05D005919 2.8e-88 330.1 438 42.5
vmacro22686 Vaccinium macrocarpon HOM05D004448 ORTHO05D005919 2.8e-88 330.1 456 41.0
RhsimUnG0189000 Rhododendron simsii HOM05D004448 ORTHO05D005919 3.6e-88 329.7 443 41.3
Nitab4.5_0000938g0020 Nicotiana tabacum HOM05D004448 ORTHO05D005919 6.2e-88 328.9 491 39.7
PGSC0003DMG400033614 Solanum tuberosum HOM05D004448 ORTHO05D005919 9.0e-87 325.1 516 37.4
PGR142G4073 Punica granatum HOM05D004448 ORTHO05D005919 1.5e-86 324.3 478 39.5
Ah.14g085380 Amaranthus hybridus HOM05D004448 ORTHO05D005919 2.0e-86 323.9 469 41.4
CsaV3_1G040260 Cucumis sativus L. HOM05D004448 ORTHO05D005919 7.6e-86 322.0 474 40.9
CsaV3_UNG066510 Cucumis sativus L. HOM05D004448 ORTHO05D005919 7.6e-86 322.0 473 41.0
Medtr7g090060 Medicago truncatula HOM05D004448 ORTHO05D005919 1.7e-85 320.9 410 45.1
Sopen07g011050 Solanum pennellii HOM05D004448 ORTHO05D005919 1.7e-85 320.9 491 38.1
Thecc.09G092200 Theobroma cacao HOM05D004448 ORTHO05D005919 1.7e-85 320.9 501 39.9
Lj2g0008301 Lotus japonicus HOM05D004448 ORTHO05D005919 3.8e-85 319.7 490 40.2
Medtr6g092520 Medicago truncatula HOM05D004448 ORTHO05D005919 3.8e-85 319.7 412 45.1
arahy.Tifrunner.gnm1.ann1.LLR3FQ Arachis hypogaea HOM05D004448 ORTHO05D005919 1.1e-84 318.2 403 44.4
Duzib168G0645 Durio zibethinus HOM05D004448 ORTHO05D005919 1.9e-84 317.4 501 39.5
Solyc07g021550.3 Solanum lycopersicum HOM05D004448 ORTHO05D005919 1.9e-84 317.4 491 37.9
arahy.Tifrunner.gnm1.ann1.6Q96ZG Arachis hypogaea HOM05D004448 ORTHO05D005919 7.1e-84 315.5 403 44.4
Lsat_1_v5_gn_5_145680 Lactuca sativa HOM05D004448 ORTHO05D005919 1.6e-83 314.3 464 42.2
Glyma.07G128700 Glycine max HOM05D004448 ORTHO05D005919 2.7e-83 313.5 469 39.9
Eucgr.C00913 Eucalyptus grandis HOM05D004448 ORTHO05D005919 3.5e-83 313.2 508 38.8
FAN19G1271 Fragaria x ananassa HOM05D004448 ORTHO05D005919 3.5e-83 313.2 474 39.0
MELO3C015453.2 Cucumis melo HOM05D004448 ORTHO05D005919 1.0e-82 311.6 473 39.7
Peaxi162Scf00175g00047 Petunia axillaris HOM05D004448 ORTHO05D005919 1.7e-82 310.8 517 38.7
Ciclev10010615m.g Citrus clementina HOM05D004448 ORTHO05D005919 3.0e-82 310.1 478 39.3
FAN23G3053 Fragaria x ananassa HOM05D004448 ORTHO05D005919 3.0e-82 310.1 473 39.1
VMungo0464G0625 Vigna mungo HOM05D005189 ORTHO05D006093 3.9e-82 309.7 426 42.3
Psat1g049640 Pisum sativum HOM05D004448 ORTHO05D005919 6.6e-82 308.9 412 47.3
Nitab4.5_0004087g0010 Nicotiana tabacum HOM05D004448 ORTHO05D005919 8.7e-82 308.5 409 41.6
DCAR_024685 Daucus carota HOM05D004448 ORTHO05D005919 1.5e-81 307.8 467 38.3
Sc18g0001910 Simmondsia chinensis HOM05D004448 ORTHO05D005919 1.1e-79 301.6 413 42.6
Hund06702 Selenicereus undatus HOM05D004448 ORTHO05D005919 3.4e-78 296.6 411 41.6
Gohir.D08G265800 Gossypium hirsutum HOM05D004448 ORTHO05D005919 2.2e-77 293.9 407 42.0
HanXRQChr12g0354731 Helianthus annuus HOM05D004448 ORTHO05D005919 2.2e-77 293.9 305 50.5
ECA234G2909 Erigeron canadensis HOM05D004448 ORTHO05D005919 1.4e-76 291.2 312 49.7
Cpa.g.sc7.238 Carica papaya HOM05D004448 ORTHO05D005919 2.1e-75 287.3 324 48.1
Gohir.D08G266000 Gossypium hirsutum HOM05D004448 ORTHO05D005919 3.5e-75 286.6 407 40.3
RcHm_v2.0_Chr2g0093031 Rosa chinensis HOM05D004448 ORTHO05D005919 4.6e-75 286.2 488 38.7
SalBow6G4094 Salvia bowleyana HOM05D004448 ORTHO05D005919 7.9e-75 285.4 411 40.4
Gohir.A08G245000 Gossypium hirsutum HOM05D004448 ORTHO05D005919 1.1e-73 281.6 410 41.2
CSS0050052 Camellia sinensis var. sinensis HOM05D004448 ORTHO05D005919 6.2e-72 275.8 494 43.7
Migut.J00591 Erythranthe guttata HOM05D004448 ORTHO05D005919 8.1e-72 275.4 316 48.1
A10p14110 Brassica napus HOM05D004448 ORTHO05D005919 1.1e-71 275.0 475 37.7
BraA10t43502Z Brassica rapa HOM05D004448 ORTHO05D005919 1.4e-71 274.6 475 37.5
AT5G56780 Arabidopsis thaliana HOM05D004448 ORTHO05D005919 3.1e-71 273.5 483 36.9
C09p48340 Brassica napus HOM05D004448 ORTHO05D005919 3.4e-70 270.0 476 36.1
BcaC04g20054 Brassica carinata HOM05D004448 ORTHO05D005919 5.8e-70 269.2 476 36.3
BolC9t57684H Brassica oleracea HOM05D004448 ORTHO05D005919 9.9e-70 268.5 476 36.3
Aa31LG3G12720 Aethionema arabicum HOM05D004448 ORTHO05D005919 1.7e-69 267.7 472 36.0
BcaB08g36059 Brassica carinata HOM05D004448 ORTHO05D005919 6.4e-69 265.8 473 36.2
Rhsim03G0233500 Rhododendron simsii HOM05D004448 ORTHO05D005919 1.1e-68 265.0 481 37.0
Sp6g18520 Schrenkiella parvula HOM05D004448 ORTHO05D005919 9.3e-68 261.9 476 36.8
THA.LOC104813490 Tarenaya hassleriana HOM05D004448 ORTHO05D005919 9.3e-68 261.9 477 35.2
unitig_0.g218 Utricularia gibba HOM05D004448 ORTHO05D005919 1.2e-67 261.5 423 37.6
Atru.chr7.1561 Acer truncatum HOM05D004448 ORTHO05D005919 1.6e-67 261.2 429 38.0
Carub.0008s1726 Capsella rubella HOM05D004448 ORTHO05D005919 2.1e-67 260.8 481 37.0
HPP92_006937 Vanilla planifolia HOM05D004448 ORTHO05D005919 8.7e-66 255.4 316 45.3
vmacro06280 Vaccinium macrocarpon HOM05D004448 ORTHO05D005919 1.9e-65 254.2 319 45.5
Thhalv10015325m.g Eutrema salsugineum HOM05D004448 ORTHO05D005919 2.5e-65 253.8 470 36.2
Ca_08398_v3 Cicer arietinum L. HOM05D004448 ORTHO05D005919 3.3e-65 253.4 301 50.2
C04p01820 Brassica napus HOM05D004448 ORTHO05D005919 5.6e-65 252.7 460 35.0
Ciclev10008074m.g Citrus clementina HOM05D004448 ORTHO05D005919 5.6e-65 252.7 474 35.2
BcaC02g12506 Brassica carinata HOM05D004448 ORTHO05D005919 3.7e-64 250.0 466 36.1
AL8G32620 Arabidopsis lyrata HOM05D004448 ORTHO05D005919 4.0e-63 246.5 530 33.6
ATR0705G152 Amborella trichopoda HOM05D004448 ORTHO05D005919 5.3e-63 246.1 305 43.9
BraA05t19157Z Brassica rapa HOM05D004448 ORTHO05D005919 2.0e-62 244.2 463 36.5
Gohir.A08G244900 Gossypium hirsutum HOM05D004448 ORTHO05D005919 4.5e-62 243.0 468 37.4
BcaC02g12705 Brassica carinata HOM05D004448 ORTHO05D005919 5.8e-62 242.7 448 34.8
Zm00001eb325970 Zea mays HOM05D004448 ORTHO05D005919 5.8e-62 242.7 334 43.1
Duzib150G0429 Durio zibethinus HOM05D004448 ORTHO05D005919 3.2e-60 236.9 531 33.5
Os07g0586700 Oryza sativa ssp. japonica HOM05D004448 ORTHO05D005919 2.7e-59 233.8 460 35.4
Mapoly0070s0093 Marchantia polymorpha HOM05D004448 ORTHO05D005919 3.5e-59 233.4 445 33.7
CARHR270530 Cardamine hirsuta HOM05D004448 ORTHO05D005919 7.9e-59 232.3 456 36.0
A05p01610 Brassica napus HOM05D004448 ORTHO05D005919 6.7e-58 229.2 306 43.8
Aa31LG2G21230 Aethionema arabicum HOM05D004448 ORTHO05D005919 4.1e-55 219.9 463 35.0
Pp3c3_34250 Physcomitrium patens HOM05D004448 ORTHO05D005919 2.7e-51 207.2 326 38.3
AagrBONN_evm.TU.Sc2ySwM_117.4075 Anthoceros agrestis HOM05D004448 ORTHO05D005919 5.1e-50 203.0 357 35.9
Rhsim03G0233900 Rhododendron simsii HOM05D004448 ORTHO05D005919 5.7e-49 199.5 296 38.5
TPR.G40396 Trifolium pratense HOM05D004448 ORTHO05D005919 1.7e-45 188.0 250 44.4
FvH4_1g07150 Fragaria vesca HOM05D004448 ORTHO05D005919 4.2e-44 183.3 344 33.1
Sed0012121 Sechium edule HOM05D004448 ORTHO05D005919 3.6e-43 180.3 341 34.9
SMO139G0129 Selaginella moellendorffii HOM05D006068 ORTHO05D007579 4.7e-43 179.9 336 33.6
MD02G1076000 Malus domestica HOM05D004448 ORTHO05D005919 8.8e-42 175.6 143 58.0
Gohir.A08G245100 Gossypium hirsutum HOM05D004448 ORTHO05D005919 7.4e-41 172.6 291 39.5
Gorai.N024000 Gossypium raimondii HOM05D004448 ORTHO05D005919 4.8e-40 169.9 407 36.6
Pp3c4_9790 Physcomitrium patens HOM05D004448 ORTHO05D005919 1.8e-39 167.9 324 34.0
SGA_v2.0_scaffold62G21589 Striga asiatica HOM05D004448 ORTHO05D005919 2.4e-39 167.5 143 54.5
CBR_g29538 Chara braunii HOM05D004448 ORTHO05D005919 4.1e-39 166.8 255 39.2
CANSAT56G3488 Cannabis sativa HOM05D004448 ORTHO05D005919 2.6e-38 164.1 270 37.0
CARHR270520 Cardamine hirsuta HOM05D004448 ORTHO05D005919 1.1e-36 158.7 325 35.4
Pp3c27_3080 Physcomitrium patens HOM05D004448 ORTHO05D005919 7.2e-36 156.0 570 26.7
TPR.G35500 Trifolium pratense HOM05D004448 ORTHO05D005919 1.8e-34 151.4 148 54.1
Pp3c16_1200 Physcomitrium patens HOM05D004448 ORTHO05D005919 3.9e-34 150.2 571 26.8
RhsimUnG0145000 Rhododendron simsii HOM05D004448 ORTHO05D005919 5.2e-34 149.8 265 34.3
Pp3c15_21310 Physcomitrium patens HOM05D004448 ORTHO05D005919 1.1e-33 148.7 394 29.4
Lalb_Chr24g0393831 Lupinus albus HOM05D004448 ORTHO05D005919 2.8e-32 144.1 153 52.3
SMO157G0009 Selaginella moellendorffii HOM05D006068 ORTHO05D007579 6.3e-32 142.9 302 32.8
AT5G56770 Arabidopsis thaliana HOM05D004448 ORTHO05D005919 7.7e-30 136.0 180 42.8
Rhsim05G0023200 Rhododendron simsii HOM05D004448 ORTHO05D005919 6.5e-29 132.9 287 31.4
RhsimUnG0144800 Rhododendron simsii HOM05D004448 ORTHO05D005919 6.5e-29 132.9 287 31.4
TPR.G35590 Trifolium pratense HOM05D004448 ORTHO05D005919 2.5e-28 131.0 103 60.2
MD02G1075500 Malus domestica HOM05D004448 ORTHO05D005919 7.2e-28 129.4 260 33.5
AL8G32610 Arabidopsis lyrata HOM05D004448 ORTHO05D005919 1.2e-25 122.1 172 40.1
Gohir.D08G265900 Gossypium hirsutum HOM05D004448 ORTHO05D005919 6.3e-24 116.3 407 31.7
Atru.chr7.1554 Acer truncatum HOM05D004448 ORTHO05D005919 1.2e-22 112.1 284 31.3
Medtr6g092500 Medicago truncatula HOM05D004448 ORTHO05D005919 2.2e-21 107.8 114 48.2
Atru.chr7.1555 Acer truncatum HOM05D004448 ORTHO05D005919 2.5e-20 104.4 96 52.1
Hma1.2p1_0024F.1_g016070 Hydrangea macrophylla HOM05D004448 ORTHO05D005919 2.5e-20 104.4 98 53.1
Carub.0008s1725 Capsella rubella HOM05D004448 ORTHO05D005919 9.4e-20 102.4 194 36.6
CARHR233700 Cardamine hirsuta HOM05D004448 ORTHO05D015948 3.6e-19 100.5 503 23.9
SalBow1G6253 Salvia bowleyana HOM05D004448 ORTHO05D005919 8.0e-19 99.4 142 38.7
Pp3c5_7060 Physcomitrium patens HOM05D004448 ORTHO05D005919 1.2e-17 95.5 383 26.6
RhsimUnG0032400 Rhododendron simsii HOM05D004448 ORTHO05D005919 9.1e-15 85.9 287 26.1
AL7G26800 Arabidopsis lyrata HOM05D004448 ORTHO05D015948 7.7e-14 82.8 265 26.4
Medtr6g092480 Medicago truncatula HOM05D012533 ORTHO05D264910 1.0e-13 82.4 69 55.1
AT4G26170 Arabidopsis thaliana HOM05D004448 ORTHO05D015948 3.8e-13 80.5 225 28.9
Sp7g24190 Schrenkiella parvula HOM05D004448 ORTHO05D015948 6.6e-13 79.7 267 27.0
Glyma.01G003300 Glycine max HOM05D004448 ORTHO05D005919 8.6e-13 79.3 102 44.1
Carub.0007s1478 Capsella rubella HOM05D004448 ORTHO05D015948 2.5e-12 77.8 288 27.1
CBR_g20264 Chara braunii HOM05D000505 ORTHO05D000301 1.4e-10 72.0 137 35.0
Aa31LG3G540 Aethionema arabicum HOM05D001256 ORTHO05D001141 1.5e-09 68.6 209 28.2
BraA01t01701Z Brassica rapa HOM05D004448 ORTHO05D015948 4.4e-09 67.0 214 41.1
Thhalv10025245m.g Eutrema salsugineum HOM05D004448 ORTHO05D015948 7.5e-09 66.2 285 25.3
BcaNung02444 Brassica carinata HOM05D004448 ORTHO05D015948 8.3e-08 62.8 98 33.7
A01p17460 Brassica napus HOM05D004448 ORTHO05D015948 5.4e-07 60.1 112 37.5
FvH4_1g07231 Fragaria vesca HOM05D004448 ORTHO05D005919 9.2e-07 59.3 151 27.2


User provided reference genes

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