Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3983 Papaver somniferum HOM05D003612 ORTHO05D004323 3.8e-163 578.2 278 100.0
PSO210G2319 Papaver somniferum HOM05D003612 ORTHO05D004323 1.1e-112 410.6 251 79.7
PSO648G0079 Papaver somniferum HOM05D003612 ORTHO05D004323 1.0e-91 340.9 251 67.3
PSO339G0745 Papaver somniferum HOM05D003612 ORTHO05D004323 1.1e-72 277.7 219 64.4
TAR369G0285 Trochodendron aralioides HOM05D003612 ORTHO05D004323 1.0e-70 271.2 257 54.9
MBI16_g21161_MAGBIO Magnolia biondii HOM05D003612 ORTHO05D004323 4.8e-65 252.3 252 51.6
Dinv02797 Davidia involucrata HOM05D003612 ORTHO05D004323 1.1e-64 251.1 251 51.8
PSO339G0740 Papaver somniferum HOM05D003612 ORTHO05D004323 1.1e-64 251.1 184 66.3
Lj2A386T88 Lonicera japonica HOM05D003612 ORTHO05D004323 5.8e-63 245.4 251 50.2
CSS0036075 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 4.9e-62 242.3 251 51.0
Rhsim04G0105800 Rhododendron simsii HOM05D003612 ORTHO05D004323 2.5e-61 240.0 251 49.8
Actinidia22794 Actinidia chinensis HOM05D003612 ORTHO05D004323 7.9e-60 235.0 251 49.8
Dinv39651 Davidia involucrata HOM05D003612 ORTHO05D004323 2.3e-59 233.4 251 49.8
Aqoxy7G03834 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 3.0e-59 233.0 251 49.8
Manes.04G104200 Manihot esculenta HOM05D003612 ORTHO05D004323 1.3e-57 227.6 252 46.0
vmacro09060 Vaccinium macrocarpon HOM05D003612 ORTHO05D004323 1.3e-57 227.6 251 48.6
QL11p026785 Quercus lobata HOM05D003612 ORTHO05D004323 6.3e-57 225.3 254 49.2
PSO339G6630 Papaver somniferum HOM05D003612 ORTHO05D004323 1.8e-56 223.8 214 54.7
Migut.K00098 Erythranthe guttata HOM05D003612 ORTHO05D004323 3.1e-56 223.0 255 49.0
Migut.B00971 Erythranthe guttata HOM05D003612 ORTHO05D004323 4.1e-56 222.6 234 53.0
QL07p002913 Quercus lobata HOM05D003612 ORTHO05D004323 5.3e-56 222.2 254 48.4
GSVIVG01033242001 Vitis vinifera HOM05D003612 ORTHO05D004323 5.3e-56 222.2 246 48.0
Ciclev10005938m.g Citrus clementina HOM05D003612 ORTHO05D004323 1.2e-55 221.1 251 47.8
Cfa016791 Carpinus fangiana HOM05D003612 ORTHO05D004323 4.5e-55 219.2 254 47.2
Aqoxy7G03372 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 1.0e-54 218.0 251 47.0
Actinidia17229 Actinidia chinensis HOM05D003612 ORTHO05D004323 1.3e-54 217.6 234 49.6
CiPaw.09G039700 Carya illinoinensis HOM05D003612 ORTHO05D004323 1.7e-54 217.2 254 47.2
Cc06_g17860 Coffea canephora HOM05D003612 ORTHO05D004323 1.7e-54 217.2 251 48.2
MELO3C025231.2 Cucumis melo HOM05D003612 ORTHO05D004323 2.2e-54 216.9 257 45.9
ClCG04G006280 Citrullus lanatus HOM05D003612 ORTHO05D004323 2.9e-54 216.5 255 46.3
Gorai.002G227800 Gossypium raimondii HOM05D003612 ORTHO05D004323 8.5e-54 214.9 247 45.3
CsaV3_4G027280 Cucumis sativus L. HOM05D003612 ORTHO05D004323 3.2e-53 213.0 257 46.7
Cc04_g15140 Coffea canephora HOM05D003612 ORTHO05D004323 4.2e-53 212.6 251 46.6
PGR004G2683 Punica granatum HOM05D003612 ORTHO05D004323 4.2e-53 212.6 252 48.8
Sed0024079 Sechium edule HOM05D003612 ORTHO05D004323 4.2e-53 212.6 252 46.8
Oeu023123.1 Olea europaea HOM05D003612 ORTHO05D004323 5.5e-53 212.2 241 47.3
Hund23474 Selenicereus undatus HOM05D003612 ORTHO05D004323 7.2e-53 211.8 250 45.2
Gohir.A01G194000 Gossypium hirsutum HOM05D003612 ORTHO05D004323 1.2e-52 211.1 247 45.3
Lj1g0003709 Lotus japonicus HOM05D003612 ORTHO05D004323 4.6e-52 209.1 233 47.2
Eucgr.B02734 Eucalyptus grandis HOM05D003612 ORTHO05D004323 6.1e-52 208.8 251 45.0
Oeu008170.1 Olea europaea HOM05D003612 ORTHO05D004323 6.1e-52 208.8 247 46.6
Nn8g39441 Nelumbo nucifera HOM05D003612 ORTHO05D004323 7.9e-52 208.4 250 44.8
Cpa.g.sc182.7 Carica papaya HOM05D003612 ORTHO05D004323 1.4e-51 207.6 255 45.5
MSTRG.26129 Avicennia marina HOM05D003612 ORTHO05D004323 1.8e-51 207.2 250 46.4
Haze_19817 Corylus avellana HOM05D003612 ORTHO05D004323 3.0e-51 206.5 274 44.2
Aa31LG1G13790 Aethionema arabicum HOM05D003612 ORTHO05D004323 5.1e-51 205.7 252 44.8
Potri.017G142200 Populus trichocarpa HOM05D003612 ORTHO05D004323 6.7e-51 205.3 249 45.8
Nitab4.5_0000082g0220 Nicotiana tabacum HOM05D003612 ORTHO05D004323 8.8e-51 204.9 255 47.1
SGA_v2.0_scaffold94G28492 Striga asiatica HOM05D003612 ORTHO05D004323 8.8e-51 204.9 258 45.7
VMungo1309G0648 Vigna mungo HOM05D003612 ORTHO05D004323 1.1e-50 204.5 252 43.7
VMungo1383G3573 Vigna mungo HOM05D003612 ORTHO05D004323 1.1e-50 204.5 253 45.1
Haze_19820 Corylus avellana HOM05D003612 ORTHO05D004323 1.5e-50 204.1 274 43.8
DCAR_030722 Daucus carota HOM05D003612 ORTHO05D004323 1.5e-50 204.1 262 42.7
Sabra17G0119100 Salix brachista HOM05D003612 ORTHO05D004323 2.0e-50 203.8 247 44.5
TPR.G6202 Trifolium pratense HOM05D003612 ORTHO05D004323 4.3e-50 202.6 255 44.7
TWI74G0690 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 4.3e-50 202.6 259 45.6
Psat7g055720 Pisum sativum HOM05D003612 ORTHO05D004323 5.7e-50 202.2 264 44.3
Sopen10g029960 Solanum pennellii HOM05D003612 ORTHO05D004323 5.7e-50 202.2 255 46.7
Hund15698 Selenicereus undatus HOM05D003612 ORTHO05D004323 9.7e-50 201.4 251 43.8
Nitab4.5_0000082g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.3e-49 201.1 255 45.1
Prupe.7G055000 Prunus persica HOM05D003612 ORTHO05D004323 1.7e-49 200.7 251 45.8
Aa31LG10G12210 Aethionema arabicum HOM05D000708 ORTHO05D004323 2.2e-49 200.3 279 40.9
COL.COLO4_19254 Corchorus olitorius HOM05D003612 ORTHO05D004323 2.2e-49 200.3 251 43.8
SalBow1G2865 Salvia bowleyana HOM05D003612 ORTHO05D004323 2.2e-49 200.3 245 47.3
TWI53G1732 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 2.2e-49 200.3 252 45.2
Eucgr.A02322 Eucalyptus grandis HOM05D003612 ORTHO05D004323 2.8e-49 199.9 251 44.2
arahy.Tifrunner.gnm1.ann1.GM1CB9 Arachis hypogaea HOM05D003612 ORTHO05D004323 3.7e-49 199.5 245 46.5
Solyc10g079310.2 Solanum lycopersicum HOM05D003612 ORTHO05D004323 6.3e-49 198.7 254 45.7
Nitab4.5_0004416g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.1e-48 198.0 253 45.1
COL.COLO4_22302 Corchorus olitorius HOM05D003612 ORTHO05D004323 1.4e-48 197.6 251 44.2
PGSC0003DMG400008168 Solanum tuberosum HOM05D003612 ORTHO05D004323 1.4e-48 197.6 255 45.5
Ca_08432_v3 Cicer arietinum L. HOM05D003612 ORTHO05D004323 1.8e-48 197.2 256 43.0
arahy.Tifrunner.gnm1.ann1.65NHSX Arachis hypogaea HOM05D003612 ORTHO05D004323 3.1e-48 196.4 245 46.1
Nitab4.5_0000912g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 5.3e-48 195.7 253 45.1
FAN02G1760 Fragaria x ananassa HOM05D003612 ORTHO05D004323 1.2e-47 194.5 233 44.2
Nn1g01643 Nelumbo nucifera HOM05D003612 ORTHO05D004323 1.2e-47 194.5 251 43.0
ECA236G0894 Erigeron canadensis HOM05D003612 ORTHO05D004323 1.5e-47 194.1 260 43.1
FvH4_6g24380 Fragaria vesca HOM05D003612 ORTHO05D004323 3.4e-47 193.0 234 44.4
Nitab4.5_0010316g0020 Nicotiana tabacum HOM05D003612 ORTHO05D004323 3.4e-47 193.0 253 44.7
Psat3g074360 Pisum sativum HOM05D003612 ORTHO05D004323 4.5e-47 192.6 256 43.8
TPR.G18234 Trifolium pratense HOM05D003612 ORTHO05D004323 4.5e-47 192.6 255 42.7
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 5.9e-47 192.2 233 44.2
Medtr8g090105 Medicago truncatula HOM05D003612 ORTHO05D004323 7.7e-47 191.8 259 40.9
MD12G1080400 Malus domestica HOM05D003612 ORTHO05D004323 1.0e-46 191.4 252 45.2
Peaxi162Scf00059g01812 Petunia axillaris HOM05D003612 ORTHO05D004323 1.0e-46 191.4 255 43.9
CANSAT80G2682 Cannabis sativa HOM05D003612 ORTHO05D004323 1.3e-46 191.0 251 43.0
CAN.G641.26 Capsicum annuum HOM05D003612 ORTHO05D004323 1.3e-46 191.0 253 43.5
Thecc.05G151100 Theobroma cacao HOM05D003612 ORTHO05D004323 3.8e-46 189.5 197 49.7
AL5G38900 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 5.0e-46 189.1 266 42.1
HPP92_020032 Vanilla planifolia HOM05D003612 ORTHO05D004323 5.0e-46 189.1 213 42.7
Os09g0504800 Oryza sativa ssp. japonica HOM05D003612 ORTHO05D004323 7.2e-45 185.3 225 42.7
Phvul.008G158112 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 2.1e-44 183.7 220 44.5
CARHR167560 Cardamine hirsuta HOM05D003612 ORTHO05D004323 2.7e-44 183.3 255 42.7
RcHm_v2.0_Chr3g0483371 Rosa chinensis HOM05D003612 ORTHO05D004323 2.7e-44 183.3 263 40.3
Lj6g0010730 Lotus japonicus HOM05D003612 ORTHO05D004323 1.0e-43 181.4 217 44.2
Carub.0005s2421 Capsella rubella HOM05D003612 ORTHO05D004323 1.4e-43 181.0 254 42.5
HanXRQChr04g0113101 Helianthus annuus HOM05D003612 ORTHO05D004323 1.4e-43 181.0 209 46.4
PSO339G4790 Papaver somniferum HOM05D003612 ORTHO05D004323 1.8e-43 180.6 152 59.2
AT3G57360 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 2.3e-43 180.3 265 40.8
CSS0050265 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 2.3e-43 180.3 185 49.2
BraA04t16040Z Brassica rapa HOM05D003612 ORTHO05D004323 3.9e-43 179.5 265 40.4
Sopen03g026320 Solanum pennellii HOM05D003612 ORTHO05D004323 3.9e-43 179.5 199 48.7
unitig_52.g17667 Utricularia gibba HOM05D003612 ORTHO05D004323 3.9e-43 179.5 234 44.0
Carub.0001s3481 Capsella rubella HOM05D003612 ORTHO05D004323 5.1e-43 179.1 263 40.7
AL3G11670 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 6.7e-43 178.7 243 44.0
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 6.7e-43 178.7 216 44.9
Lsat_1_v5_gn_7_11501 Lactuca sativa HOM05D000048 ORTHO05D000436 2.0e-42 177.2 211 43.1
AUR62029731 Chenopodium quinoa HOM05D003612 ORTHO05D004323 3.3e-42 176.4 275 37.5
ClCG10G015700 Citrullus lanatus HOM05D003612 ORTHO05D004323 3.3e-42 176.4 248 42.7
SHI13547 Sapria himalayana HOM05D003612 ORTHO05D004323 3.3e-42 176.4 252 40.9
AUR62032829 Chenopodium quinoa HOM05D003612 ORTHO05D004323 4.4e-42 176.0 264 39.4
Glyma.07G129400 Glycine max HOM05D003612 ORTHO05D004323 1.3e-41 174.5 276 37.7
BcaC02g09930 Brassica carinata HOM05D003612 ORTHO05D004323 4.8e-41 172.6 251 40.2
C04p35070 Brassica napus HOM05D003612 ORTHO05D004323 4.8e-41 172.6 251 40.2
BolC4t25063H Brassica oleracea HOM05D003612 ORTHO05D004323 4.8e-41 172.6 251 40.2
ATR0829G008 Amborella trichopoda HOM05D003612 ORTHO05D004323 6.3e-41 172.2 297 36.0
A09p50260 Brassica napus HOM05D003612 ORTHO05D004323 6.3e-41 172.2 253 40.7
BraA09t40476Z Brassica rapa HOM05D003612 ORTHO05D004323 6.3e-41 172.2 253 40.7
THA.LOC104802043 Tarenaya hassleriana HOM05D003612 ORTHO05D004323 6.3e-41 172.2 254 41.7
Zm00001eb102310 Zea mays HOM05D003612 ORTHO05D004323 1.8e-40 170.6 229 39.7
FAN24G0412 Fragaria x ananassa HOM05D003786 ORTHO05D004375 3.1e-40 169.9 225 44.0
Lalb_Chr20g0110641 Lupinus albus HOM05D003612 ORTHO05D004323 4.1e-40 169.5 244 40.2
EL10Ac6g13255 Beta vulgaris HOM05D003612 ORTHO05D004323 5.3e-40 169.1 252 38.5
Phvul.007G088100 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 1.5e-39 167.5 199 44.2
C08p32750 Brassica napus HOM05D003612 ORTHO05D004323 2.0e-39 167.2 253 39.1
BolC8t50886H Brassica oleracea HOM05D003612 ORTHO05D004323 2.0e-39 167.2 253 39.1
A04p03190 Brassica napus HOM05D003612 ORTHO05D004323 2.6e-39 166.8 271 38.7
AT3G02370 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 4.5e-39 166.0 198 45.5
Sp5g05240 Schrenkiella parvula HOM05D003612 ORTHO05D004323 4.5e-39 166.0 265 37.4
TAR369G0664 Trochodendron aralioides HOM05D003612 ORTHO05D004323 4.5e-39 166.0 165 49.7
FvH4_2g14101 Fragaria vesca HOM05D003786 ORTHO05D004375 7.7e-39 165.2 225 43.6
Dinv02795 Davidia involucrata HOM05D003612 ORTHO05D004323 2.9e-38 163.3 171 49.1
AUR62005836 Chenopodium quinoa HOM05D000760 ORTHO05D004323 3.8e-38 162.9 243 40.3
Thhalv10006455m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 3.8e-38 162.9 231 39.8
Ah.03g134750 Amaranthus hybridus HOM05D003612 ORTHO05D004323 8.5e-38 161.8 258 37.6
Sc04g0007910 Simmondsia chinensis HOM05D003612 ORTHO05D004323 9.4e-37 158.3 167 48.5
Thhalv10008553m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 2.1e-36 157.1 200 42.5
CDE09G0671 Ceratophyllum demersum HOM05D003612 ORTHO05D004323 6.1e-36 155.6 238 41.2
Duzib128G0868 Durio zibethinus HOM05D003612 ORTHO05D004323 8.0e-36 155.2 251 37.8
Thhalv10009639m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 3.0e-35 153.3 255 38.8
BcaC07g40390 Brassica carinata HOM05D003612 ORTHO05D004323 1.1e-34 151.4 200 41.5
BolC8t50888H Brassica oleracea HOM05D003612 ORTHO05D004323 2.0e-34 150.6 252 39.7
Thhalv10009908m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 2.0e-34 150.6 243 38.7
Prupe.5G048800 Prunus persica HOM05D003612 ORTHO05D004323 9.7e-34 148.3 199 39.7
GSVIVG01033245001 Vitis vinifera HOM05D003612 ORTHO05D004323 1.3e-33 147.9 155 47.7
BcaB02g08320 Brassica carinata HOM05D003612 ORTHO05D004323 4.8e-33 146.0 207 36.7
Gohir.D01G184300 Gossypium hirsutum HOM05D003612 ORTHO05D004323 4.8e-33 146.0 161 46.0
Sopen03g026330 Solanum pennellii HOM05D003612 ORTHO05D004323 4.8e-33 146.0 213 40.8
Lj1C1128T4 Lonicera japonica HOM05D003612 ORTHO05D004323 1.2e-31 141.4 167 45.5
PGSC0003DMG400011936 Solanum tuberosum HOM05D003612 ORTHO05D004323 1.6e-31 141.0 255 36.9
Peaxi162Scf00244g00019 Petunia axillaris HOM05D003612 ORTHO05D004323 1.2e-28 131.3 166 44.0
SMO364G0364 Selaginella moellendorffii HOM05D003612 ORTHO05D004323 2.1e-28 130.6 210 36.7
SGA_v2.0_scaffold1G00588 Striga asiatica HOM05D003612 ORTHO05D004323 3.6e-28 129.8 210 39.5
Pp3c3_37380 Physcomitrium patens HOM05D003612 ORTHO05D004323 4.4e-26 122.9 237 33.3
Ah.02g117470 Amaranthus hybridus HOM05D003612 ORTHO05D004323 2.8e-25 120.2 227 34.8
AagrBONN_evm.TU.Sc2ySwM_368.1563 Anthoceros agrestis HOM05D003612 ORTHO05D004323 3.1e-24 116.7 286 28.7
SEGI_02185 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 5.4e-24 115.9 225 33.3
Nn2g10440 Nelumbo nucifera HOM05D003612 ORTHO05D004323 1.6e-23 114.4 124 48.4
BcaNung07094 Brassica carinata HOM05D003612 ORTHO05D004323 1.5e-21 107.8 155 37.4
CSS0020602 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 1.5e-21 107.8 166 38.0
MELO3C030712.2 Cucumis melo HOM05D003612 ORTHO05D004323 4.2e-21 106.3 133 44.4
Eucgr.A02319 Eucalyptus grandis HOM05D003612 ORTHO05D004323 2.1e-20 104.0 251 32.3
RcHm_v2.0_Chr1g0361791 Rosa chinensis HOM05D003612 ORTHO05D004323 1.5e-18 97.8 93 49.5
Nitab4.5_0001598g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 2.6e-18 97.1 197 35.5
MD14G1076600 Malus domestica HOM05D003612 ORTHO05D004323 3.7e-17 93.2 231 32.9
Mapoly0007s0121 Marchantia polymorpha HOM05D003612 ORTHO05D004323 1.2e-15 88.2 105 39.0
QL07p002858 Quercus lobata HOM05D003612 ORTHO05D004323 8.6e-14 82.0 132 36.4
Peaxi162Scf00002g03215 Petunia axillaris HOM05D003612 ORTHO05D004323 1.1e-13 81.6 158 36.1
CBR_g2822 Chara braunii HOM05D000019 ORTHO05D000048 2.1e-12 77.4 145 32.4
Duzib093G1009 Durio zibethinus HOM05D003612 ORTHO05D004323 2.1e-12 77.4 77 44.2
Glyma.03G134401 Glycine max HOM05D003612 ORTHO05D004323 4.7e-12 76.3 92 37.0
Solyc03g096220.3 Solanum lycopersicum HOM05D003612 ORTHO05D004323 2.3e-11 73.9 70 55.7
Glyma.19G136600 Glycine max HOM05D003612 ORTHO05D004323 3.0e-11 73.6 77 54.5
Eucgr.A02317 Eucalyptus grandis HOM05D003612 ORTHO05D004323 1.2e-10 71.6 64 54.7
RcHm_v2.0_Chr6g0276201 Rosa chinensis HOM05D003786 ORTHO05D004375 2.6e-10 70.5 81 48.1
BcaNung07092 Brassica carinata HOM05D003612 ORTHO05D004323 2.2e-09 67.4 79 46.8
SEGI_36865 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 4.9e-09 66.2 82 47.6
C08p32770 Brassica napus HOM05D003612 ORTHO05D004323 1.1e-08 65.1 87 44.8
PGSC0003DMG400013536 Solanum tuberosum HOM05D003612 ORTHO05D004323 5.4e-08 62.8 87 44.8
CAN.G125.23 Capsicum annuum HOM05D000107 ORTHO05D000062 5.0e-06 56.2 111 34.2


User provided reference genes

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