Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3736 Papaver somniferum HOM05D005487 ORTHO05D007280 1.5e-255 885.6 420 100.0
PSO764G0115 Papaver somniferum HOM05D005487 ORTHO05D007280 1.8e-248 862.1 419 96.9
TAR629G3393 Trochodendron aralioides HOM05D005487 ORTHO05D007280 6.3e-217 757.3 417 83.7
Nn1g07355 Nelumbo nucifera HOM05D005487 ORTHO05D007280 1.8e-216 755.7 417 83.5
TAR724G0004 Trochodendron aralioides HOM05D005487 ORTHO05D007280 2.9e-214 748.4 417 83.5
Nn1g03329 Nelumbo nucifera HOM05D005487 ORTHO05D007280 1.1e-213 746.5 417 82.3
CiPaw.10G077700 Carya illinoinensis HOM05D005487 ORTHO05D007280 4.2e-213 744.6 417 81.1
Nitab4.5_0001198g0060 Nicotiana tabacum HOM05D005487 ORTHO05D007280 9.4e-213 743.4 417 82.3
RcHm_v2.0_Chr5g0001571 Rosa chinensis HOM05D005487 ORTHO05D007280 1.6e-212 742.7 420 81.0
TWI38G0871 Tripterygium wilfordii HOM05D005487 ORTHO05D007280 2.7e-212 741.9 417 81.8
Nitab4.5_0000143g0260 Nicotiana tabacum HOM05D005487 ORTHO05D007280 3.6e-212 741.5 417 81.5
MBI19_g29429_MAGBIO Magnolia biondii HOM05D005487 ORTHO05D007280 1.0e-211 740.0 419 82.1
QL05p069756 Quercus lobata HOM05D005487 ORTHO05D007280 1.0e-211 740.0 418 81.3
FvH4_3g01030 Fragaria vesca HOM05D005487 ORTHO05D007280 1.8e-211 739.2 417 81.1
Duzib192G1033 Durio zibethinus HOM05D005487 ORTHO05D007280 2.3e-211 738.8 417 81.5
Solyc11g012160.2 Solanum lycopersicum HOM05D005487 ORTHO05D007280 4.4e-210 734.6 417 80.6
Hma1.2p1_0135F.1_g061730 Hydrangea macrophylla HOM05D005487 ORTHO05D007280 5.7e-210 734.2 417 80.8
Sopen11g006950 Solanum pennellii HOM05D005487 ORTHO05D007280 1.3e-209 733.0 417 80.8
GSVIVG01003351001 Vitis vinifera HOM05D005487 ORTHO05D007280 1.7e-209 732.6 417 80.6
Cc09_g00910 Coffea canephora HOM05D005487 ORTHO05D007280 2.2e-209 732.3 417 80.6
Potri.006G009200 Populus trichocarpa HOM05D005487 ORTHO05D007280 6.3e-209 730.7 417 79.9
FAN21G2054 Fragaria x ananassa HOM05D005487 ORTHO05D007280 1.8e-208 729.2 417 80.1
Prupe.4G011100 Prunus persica HOM05D005487 ORTHO05D007280 3.1e-208 728.4 417 80.1
Oeu044422.1 Olea europaea HOM05D005487 ORTHO05D007280 4.1e-208 728.0 417 79.9
CAN.G1186.29 Capsicum annuum HOM05D005487 ORTHO05D007280 7.0e-208 727.2 418 81.1
Actinidia26862 Actinidia chinensis HOM05D005487 ORTHO05D007280 1.2e-207 726.5 420 79.0
Lj2C262G3 Lonicera japonica HOM05D005487 ORTHO05D007280 3.5e-207 724.9 413 79.9
Atru.chr1.2460 Acer truncatum HOM05D005487 ORTHO05D007280 4.5e-207 724.5 417 79.4
Manes.09G070300 Manihot esculenta HOM05D005487 ORTHO05D007280 5.9e-207 724.2 419 78.8
PGR004G0814 Punica granatum HOM05D005487 ORTHO05D007280 1.0e-206 723.4 417 78.9
Ciclev10015367m.g Citrus clementina HOM05D005487 ORTHO05D007280 1.7e-206 722.6 417 78.4
Aqoxy1G04106 Aquilegia oxysepala HOM05D005487 ORTHO05D007280 2.2e-206 722.2 421 79.3
Cfa000109 Carpinus fangiana HOM05D005487 ORTHO05D007280 2.2e-206 722.2 417 79.1
CSS0007892 Camellia sinensis var. sinensis HOM05D005487 ORTHO05D007280 3.8e-206 721.5 417 79.4
Thecc.06G232800 Theobroma cacao HOM05D005487 ORTHO05D007280 1.1e-205 719.9 417 78.7
Actinidia11881 Actinidia chinensis HOM05D005487 ORTHO05D007280 1.9e-205 719.2 417 80.1
EL10Ac8g20177 Beta vulgaris HOM05D005487 ORTHO05D007280 4.2e-205 718.0 417 78.7
Gohir.D06G215900 Gossypium hirsutum HOM05D005487 ORTHO05D007280 5.5e-205 717.6 417 78.7
Gorai.010G250300 Gossypium raimondii HOM05D005487 ORTHO05D007280 1.2e-204 716.5 417 78.7
arahy.Tifrunner.gnm1.ann1.8PBE23 Arachis hypogaea HOM05D005487 ORTHO05D007280 4.7e-204 714.5 417 76.0
CANSAT56G2574 Cannabis sativa HOM05D005487 ORTHO05D007280 4.7e-204 714.5 419 77.6
Gohir.A06G205600 Gossypium hirsutum HOM05D005487 ORTHO05D007280 8.0e-204 713.8 417 78.4
arahy.Tifrunner.gnm1.ann1.61KG5W Arachis hypogaea HOM05D005487 ORTHO05D007280 1.0e-203 713.4 417 76.0
HanXRQChr10g0284101 Helianthus annuus HOM05D005487 ORTHO05D007280 1.8e-203 712.6 421 77.7
Cpa.g.sc75.119 Carica papaya HOM05D005487 ORTHO05D007280 3.0e-203 711.8 417 78.9
Lalb_Chr15g0087971 Lupinus albus HOM05D005487 ORTHO05D007280 3.0e-203 711.8 417 76.7
MD10G1331100 Malus domestica HOM05D005487 ORTHO05D007280 5.2e-203 711.1 415 78.8
Thhalv10007724m.g Eutrema salsugineum HOM05D005487 ORTHO05D007280 6.7e-203 710.7 417 77.0
Psat1g176520 Pisum sativum HOM05D005487 ORTHO05D007280 1.2e-202 709.9 415 75.9
Lsat_1_v5_gn_8_64401 Lactuca sativa HOM05D005487 ORTHO05D007280 2.0e-202 709.1 425 77.9
Peaxi162Scf00558g00518 Petunia axillaris HOM05D005487 ORTHO05D007280 2.0e-202 709.1 457 73.7
Medtr2g025640 Medicago truncatula HOM05D005487 ORTHO05D007280 2.6e-202 708.8 415 75.7
AUR62021869 Chenopodium quinoa HOM05D005487 ORTHO05D007280 4.4e-202 708.0 421 77.2
AL1G23300 Arabidopsis lyrata HOM05D005487 ORTHO05D007280 9.7e-202 706.8 415 76.4
Sp1g10720 Schrenkiella parvula HOM05D005487 ORTHO05D007280 9.7e-202 706.8 417 76.3
AT1G12050 Arabidopsis thaliana HOM05D005487 ORTHO05D007280 1.3e-201 706.4 415 76.6
BolC5t29858H Brassica oleracea HOM05D005487 ORTHO05D007280 3.7e-201 704.9 417 76.0
Rhsim13G0146300 Rhododendron simsii HOM05D005487 ORTHO05D007280 4.8e-201 704.5 444 74.5
RhsimUnG0109400 Rhododendron simsii HOM05D005487 ORTHO05D007280 4.8e-201 704.5 444 74.5
Ca_00719_v3 Cicer arietinum L. HOM05D005487 ORTHO05D007280 1.1e-200 703.4 415 76.1
Carub.0001s1173 Capsella rubella HOM05D005487 ORTHO05D007280 1.4e-200 703.0 417 75.3
COL.COLO4_31878 Corchorus olitorius HOM05D005487 ORTHO05D007280 1.8e-200 702.6 415 77.1
SalBow8G2024 Salvia bowleyana HOM05D005487 ORTHO05D007280 3.1e-200 701.8 419 76.6
THA.LOC104809472 Tarenaya hassleriana HOM05D005487 ORTHO05D007280 4.1e-200 701.4 417 77.7
BcaB02g06431 Brassica carinata HOM05D005487 ORTHO05D007280 5.3e-200 701.0 418 75.4
CARHR012410 Cardamine hirsuta HOM05D005487 ORTHO05D007280 1.2e-199 699.9 417 74.6
Dinv07399 Davidia involucrata HOM05D005487 ORTHO05D007280 2.0e-199 699.1 400 80.0
PGSC0003DMG400013273 Solanum tuberosum HOM05D005487 ORTHO05D007280 2.0e-199 699.1 502 67.5
TPR.G13057 Trifolium pratense HOM05D005487 ORTHO05D007280 5.9e-199 697.6 415 75.2
MSTRG.16025 Avicennia marina HOM05D005487 ORTHO05D007280 7.7e-199 697.2 417 76.7
Sed0025030 Sechium edule HOM05D005487 ORTHO05D007280 1.0e-198 696.8 417 75.3
Eucgr.L00543 Eucalyptus grandis HOM05D005487 ORTHO05D007280 1.7e-198 696.0 450 72.4
ATR1101G021 Amborella trichopoda HOM05D005487 ORTHO05D007280 5.0e-198 694.5 420 76.4
Gorai.009G182900 Gossypium raimondii HOM05D005487 ORTHO05D007280 6.5e-198 694.1 417 76.0
Aa31LG1G2680 Aethionema arabicum HOM05D005487 ORTHO05D007280 8.5e-198 693.7 417 75.3
Glyma.15G114300 Glycine max HOM05D005487 ORTHO05D007280 8.5e-198 693.7 415 74.0
Phvul.006G143500 Phaseolus vulgaris HOM05D005487 ORTHO05D007280 1.5e-197 693.0 415 74.7
Gohir.A05G174500 Gossypium hirsutum HOM05D005487 ORTHO05D007280 3.2e-197 691.8 417 75.5
VMungo0540G1792 Vigna mungo HOM05D005487 ORTHO05D007280 3.2e-197 691.8 415 74.5
MELO3C007433.2 Cucumis melo HOM05D005487 ORTHO05D007280 9.4e-197 690.3 418 75.4
Glyma.09G010000 Glycine max HOM05D005487 ORTHO05D007280 1.2e-196 689.9 415 74.5
Lj6g0015557 Lotus japonicus HOM05D005487 ORTHO05D007280 1.2e-196 689.9 415 74.9
FAN25G0861 Fragaria x ananassa HOM05D005487 ORTHO05D007280 1.6e-196 689.5 397 79.8
ClCG01G021500 Citrullus lanatus HOM05D005487 ORTHO05D007280 2.1e-196 689.1 418 75.6
CsaV3_6G048520 Cucumis sativus L. HOM05D005487 ORTHO05D007280 6.1e-196 687.6 418 75.1
Gohir.D05G177500 Gossypium hirsutum HOM05D005487 ORTHO05D007280 6.1e-196 687.6 417 75.3
BcaC05g25225 Brassica carinata HOM05D005487 ORTHO05D007280 7.5e-194 680.6 399 77.4
BraA06t24129Z Brassica rapa HOM05D005487 ORTHO05D007280 1.7e-193 679.5 403 76.9
C05p11110 Brassica napus HOM05D005487 ORTHO05D007280 3.7e-193 678.3 399 77.2
Hund23409 Selenicereus undatus HOM05D005487 ORTHO05D007280 3.7e-193 678.3 395 78.2
A06p09440 Brassica napus HOM05D005487 ORTHO05D007280 8.3e-193 677.2 403 76.7
HPP92_003014 Vanilla planifolia HOM05D005487 ORTHO05D007280 2.4e-192 675.6 426 72.5
HPP92_027542 Vanilla planifolia HOM05D005487 ORTHO05D007280 3.1e-192 675.2 427 72.8
vmacro03645 Vaccinium macrocarpon HOM05D005487 ORTHO05D007280 9.1e-192 673.7 400 78.5
Sopen04g006840 Solanum pennellii HOM05D005487 ORTHO05D007280 1.6e-191 672.9 417 74.3
SGA_v2.0_scaffold7G03757 Striga asiatica HOM05D005487 ORTHO05D007280 3.5e-191 671.8 428 73.6
PGSC0003DMG400023608 Solanum tuberosum HOM05D005487 ORTHO05D007280 2.5e-189 665.6 417 73.6
Peaxi162Scf00442g00414 Petunia axillaris HOM05D005487 ORTHO05D007280 3.2e-189 665.2 454 68.9
Solyc04g014730.4 Solanum lycopersicum HOM05D005487 ORTHO05D007280 7.2e-189 664.1 412 74.5
CAN.G1263.14 Capsicum annuum HOM05D005487 ORTHO05D007280 1.8e-187 659.4 419 73.5
Haze_06922 Corylus avellana HOM05D005487 ORTHO05D007280 5.7e-186 654.4 431 72.4
Os02g0196800 Oryza sativa ssp. japonica HOM05D005487 ORTHO05D007280 4.9e-185 651.4 420 68.8
DCAR_027826 Daucus carota HOM05D005487 ORTHO05D007280 2.0e-183 646.0 419 73.0
Zm00001eb236160 Zea mays HOM05D005487 ORTHO05D007280 2.0e-183 646.0 419 68.5
CDE07G0927 Ceratophyllum demersum HOM05D005487 ORTHO05D007280 3.5e-183 645.2 425 71.1
Haze_06917 Corylus avellana HOM05D005487 ORTHO05D007280 3.5e-183 645.2 455 68.4
unitig_0.g999 Utricularia gibba HOM05D005487 ORTHO05D007280 5.9e-183 644.4 382 76.7
Sabra06G0007000 Salix brachista HOM05D005487 ORTHO05D007280 3.7e-177 625.2 417 71.7
AUR62012785 Chenopodium quinoa HOM05D005487 ORTHO05D007280 5.4e-176 621.3 401 73.1
Duzib235G0086 Durio zibethinus HOM05D005487 ORTHO05D007280 2.7e-167 592.4 373 75.3
SMO137G0224 Selaginella moellendorffii HOM05D005487 ORTHO05D007280 1.8e-163 579.7 415 67.5
Pp3c4_7990 Physcomitrium patens HOM05D005487 ORTHO05D007280 3.1e-163 578.9 420 65.7
Mapoly0022s0035 Marchantia polymorpha HOM05D005487 ORTHO05D007280 2.9e-161 572.4 416 61.8
Migut.M01391 Erythranthe guttata HOM05D005487 ORTHO05D007280 6.0e-159 564.7 417 65.7
AagrBONN_evm.TU.Sc2ySwM_344.3343 Anthoceros agrestis HOM05D005487 ORTHO05D007280 1.1e-157 560.5 417 62.8
Zm00001eb205930 Zea mays HOM05D005487 ORTHO05D007280 4.3e-157 558.5 358 69.6
Sc17g0007720 Simmondsia chinensis HOM05D005487 ORTHO05D007280 6.2e-156 554.7 299 83.9
Ah.09g234260 Amaranthus hybridus HOM05D005487 ORTHO05D007280 2.7e-151 539.3 417 63.8
CSS0007230 Camellia sinensis var. sinensis HOM05D005487 ORTHO05D007280 6.0e-151 538.1 436 62.2
Pp3c13_16620 Physcomitrium patens HOM05D005487 ORTHO05D007280 1.0e-142 510.8 358 67.0
Haze_26411 Corylus avellana HOM05D005487 ORTHO05D007280 6.9e-139 498.0 421 54.9
ECA236G3803 Erigeron canadensis HOM05D005487 ORTHO05D007280 3.1e-131 472.6 275 79.3
RcHm_v2.0_Chr3g0477951 Rosa chinensis HOM05D005487 ORTHO05D007280 2.1e-127 459.9 464 52.8
RcHm_v2.0_Chr3g0484131 Rosa chinensis HOM05D005487 ORTHO05D007280 1.3e-124 450.7 463 52.5
CBR_g46703 Chara braunii HOM05D005487 ORTHO05D007280 1.4e-123 447.2 472 48.7
Cre17.g732802 Chlamydomonas reinhardtii HOM05D005487 ORTHO05D007280 1.5e-117 427.2 469 46.7
PRCOL_00001448 Prasinoderma coloniale HOM05D005487 ORTHO05D007280 1.3e-110 404.1 423 49.9
Gorai.001G209700 Gossypium raimondii HOM05D005487 ORTHO05D007280 1.2e-45 188.3 115 72.2
RcHm_v2.0_Chr5g0003621 Rosa chinensis HOM05D005487 ORTHO05D007280 1.9e-32 144.4 80 83.8
SEGI_36702 Sequoiadendron giganteum HOM05D005487 ORTHO05D007280 1.5e-29 134.8 93 68.8
Gohir.D07G188750 Gossypium hirsutum HOM05D005487 ORTHO05D007280 1.4e-27 128.3 115 53.9
C06p15210 Brassica napus HOM05D005487 ORTHO05D042797 2.1e-26 124.4 89 62.9
BolC6t36696H Brassica oleracea HOM05D005487 ORTHO05D042797 2.1e-26 124.4 89 62.9
COL.COLO4_27266 Corchorus olitorius HOM05D000025 ORTHO05D000040 5.8e-21 106.3 136 44.1
Gohir.D13G151750 Gossypium hirsutum HOM05D005487 ORTHO05D007280 3.9e-17 93.6 55 76.4
BcaC08g44100 Brassica carinata HOM05D005487 ORTHO05D027150 1.1e-16 92.0 69 59.4
BolC9t55424H Brassica oleracea HOM05D005487 ORTHO05D027150 2.4e-14 84.3 66 57.6
C09p25260 Brassica napus HOM05D005487 ORTHO05D027150 3.1e-14 84.0 66 57.6
BcaC04g21976 Brassica carinata HOM05D005487 ORTHO05D027150 4.0e-14 83.6 66 56.1
SEGI_21127 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.3e-09 67.8 84 48.8
Pp3c6_20080 Physcomitrium patens HOM05D004309 ORTHO05D005588 4.8e-07 60.1 121 31.4
TAR381G0287 Trochodendron aralioides HOM05D005487 ORTHO05D415274 4.8e-07 60.1 36 72.2
MCO13G238 Micromonas commoda HOM05D004309 ORTHO05D005588 8.2e-07 59.3 145 29.7
Pp3s34_290 Physcomitrium patens HOM05D000879 ORTHO05D000265 1.8e-06 58.2 202 26.2
SEGI_02276 Sequoiadendron giganteum HOM05D004309 ORTHO05D005588 3.1e-06 57.4 140 28.6
CAN.G327.2 Capsicum annuum HOM05D001287 ORTHO05D010951 9.0e-06 55.8 25 92.0


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