Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3711 Papaver somniferum HOM05D006821 ORTHO05D008740 3.5e-121 438.3 228 100.0
PSO210G3560 Papaver somniferum HOM05D006821 ORTHO05D008740 1.2e-118 429.9 223 99.6
PSO210G3856 Papaver somniferum HOM05D006821 ORTHO05D008740 1.2e-118 429.9 223 99.6
PSO461G0046 Papaver somniferum HOM05D006821 ORTHO05D008740 2.1e-113 412.5 223 96.4
TAR633G1083 Trochodendron aralioides HOM05D006821 ORTHO05D008740 5.7e-79 298.1 225 68.0
TAR362G0286 Trochodendron aralioides HOM05D006821 ORTHO05D008740 5.9e-76 288.1 225 65.8
Actinidia18357 Actinidia chinensis HOM05D006821 ORTHO05D008740 2.9e-75 285.8 225 64.9
Duzib177G0830 Durio zibethinus HOM05D006821 ORTHO05D008740 3.2e-74 282.3 228 65.8
Hma1.2p1_0195F.1_g084560 Hydrangea macrophylla HOM05D006821 ORTHO05D008740 7.9e-73 277.7 225 63.6
Aqoxy2G03492 Aquilegia oxysepala HOM05D006821 ORTHO05D008740 2.3e-72 276.2 224 66.1
CSS0006427 Camellia sinensis var. sinensis HOM05D006821 ORTHO05D008740 8.8e-72 274.2 225 62.2
Gorai.013G120900 Gossypium raimondii HOM05D006821 ORTHO05D008740 8.8e-72 274.2 229 62.9
GSVIVG01021794001 Vitis vinifera HOM05D006821 ORTHO05D008740 3.3e-71 272.3 225 62.7
COL.COLO4_15343 Corchorus olitorius HOM05D006821 ORTHO05D008740 5.7e-71 271.6 228 62.7
Gohir.D13G107900 Gossypium hirsutum HOM05D006821 ORTHO05D008740 5.7e-71 271.6 229 62.4
Ciclev10001807m.g Citrus clementina HOM05D006821 ORTHO05D008740 1.3e-70 270.4 225 63.1
Duzib128G0425 Durio zibethinus HOM05D006821 ORTHO05D008740 1.3e-70 270.4 228 62.7
Gohir.A13G104500 Gossypium hirsutum HOM05D006821 ORTHO05D008740 1.3e-70 270.4 229 62.0
MD04G1224000 Malus domestica HOM05D006821 ORTHO05D008740 2.2e-70 269.6 226 63.3
Manes.08G134300 Manihot esculenta HOM05D006821 ORTHO05D008740 4.8e-70 268.5 225 61.3
Prupe.6G342700 Prunus persica HOM05D006821 ORTHO05D008740 4.8e-70 268.5 225 62.2
Cc02_g30600 Coffea canephora HOM05D006821 ORTHO05D008740 1.4e-69 266.9 226 60.2
Nitab4.5_0012228g0010 Nicotiana tabacum HOM05D006821 ORTHO05D008740 3.1e-69 265.8 225 59.1
PGSC0003DMG400019432 Solanum tuberosum HOM05D006821 ORTHO05D008740 9.1e-69 264.2 225 59.6
Thecc.05G283900 Theobroma cacao HOM05D006821 ORTHO05D008740 1.2e-68 263.8 228 61.4
THA.LOC104821676 Tarenaya hassleriana HOM05D006821 ORTHO05D008740 2.0e-68 263.1 225 60.4
MBI11_g26138_MAGBIO Magnolia biondii HOM05D006821 ORTHO05D008740 2.6e-68 262.7 225 60.9
Solyc01g097350.4 Solanum lycopersicum HOM05D006821 ORTHO05D008740 2.6e-68 262.7 224 58.9
RcHm_v2.0_Chr3g0451171 Rosa chinensis HOM05D006821 ORTHO05D008740 3.4e-68 262.3 225 61.3
CAN.G134.100 Capsicum annuum HOM05D006821 ORTHO05D008740 4.5e-68 261.9 225 59.6
Manes.09G153500 Manihot esculenta HOM05D006821 ORTHO05D008740 4.5e-68 261.9 225 58.2
Sopen01g041020 Solanum pennellii HOM05D006821 ORTHO05D008740 5.9e-68 261.5 224 58.9
AUR62001014 Chenopodium quinoa HOM05D006821 ORTHO05D008740 7.7e-68 261.2 221 60.6
Haze_04355 Corylus avellana HOM05D006821 ORTHO05D008740 1.3e-67 260.4 225 58.7
Dinv10030 Davidia involucrata HOM05D006821 ORTHO05D008740 1.3e-67 260.4 194 66.5
FvH4_6g02990 Fragaria vesca HOM05D006821 ORTHO05D008740 1.3e-67 260.4 225 60.0
FAN09G4578 Fragaria x ananassa HOM05D006821 ORTHO05D008740 1.7e-67 260.0 225 60.0
Peaxi162Scf00282g00328 Petunia axillaris HOM05D006821 ORTHO05D008740 1.7e-67 260.0 226 59.7
FAN05G4221 Fragaria x ananassa HOM05D006821 ORTHO05D008740 2.2e-67 259.6 225 59.6
FAN14G2672 Fragaria x ananassa HOM05D006821 ORTHO05D008740 2.9e-67 259.2 225 60.0
FAN02G2705 Fragaria x ananassa HOM05D006821 ORTHO05D008740 3.8e-67 258.8 225 59.6
MD12G1240800 Malus domestica HOM05D006821 ORTHO05D008740 3.8e-67 258.8 225 61.3
Cfa006429 Carpinus fangiana HOM05D006821 ORTHO05D008740 6.5e-67 258.1 225 59.1
AUR62004944 Chenopodium quinoa HOM05D006821 ORTHO05D008740 6.5e-67 258.1 221 61.1
Oeu038441.1 Olea europaea HOM05D006821 ORTHO05D008740 6.5e-67 258.1 225 59.1
Sc20g0000300 Simmondsia chinensis HOM05D006821 ORTHO05D008740 6.5e-67 258.1 226 58.8
Atru.chr2.810 Acer truncatum HOM05D006821 ORTHO05D008740 1.9e-66 256.5 225 59.1
FAN05G1836 Fragaria x ananassa HOM05D006821 ORTHO05D008740 1.9e-66 256.5 225 59.1
CiPaw.07G067000 Carya illinoinensis HOM05D006821 ORTHO05D008740 7.2e-66 254.6 225 58.2
Potri.005G052900 Populus trichocarpa HOM05D006821 ORTHO05D008740 9.4e-66 254.2 228 56.6
TWI56G0757 Tripterygium wilfordii HOM05D006821 ORTHO05D008740 9.4e-66 254.2 225 60.9
Hund22116 Selenicereus undatus HOM05D006821 ORTHO05D008740 1.6e-65 253.4 224 59.4
CANSAT54G2350 Cannabis sativa HOM05D006821 ORTHO05D008740 4.7e-65 251.9 225 60.0
EL10Ac4g09134 Beta vulgaris HOM05D006821 ORTHO05D008740 7.9e-65 251.1 226 58.4
Nn1g02511 Nelumbo nucifera HOM05D006821 ORTHO05D008740 7.9e-65 251.1 215 60.5
Nitab4.5_0001592g0080 Nicotiana tabacum HOM05D006821 ORTHO05D008740 1.1e-63 247.3 243 53.9
Migut.N01911 Erythranthe guttata HOM05D006821 ORTHO05D008740 2.0e-63 246.5 228 56.6
Thhalv10004570m.g Eutrema salsugineum HOM05D006821 ORTHO05D008740 4.4e-63 245.4 225 59.1
Eucgr.H04340 Eucalyptus grandis HOM05D006821 ORTHO05D008740 7.4e-63 244.6 220 57.7
Sabra05G0046500 Salix brachista HOM05D006821 ORTHO05D008740 9.7e-63 244.2 231 55.0
Sp2g20040 Schrenkiella parvula HOM05D006821 ORTHO05D008740 4.8e-62 241.9 225 59.1
Lj1g0025723 Lotus japonicus HOM05D006821 ORTHO05D008740 8.2e-62 241.1 225 55.6
QL03p025768 Quercus lobata HOM05D006821 ORTHO05D008740 3.1e-61 239.2 280 47.9
arahy.Tifrunner.gnm1.ann1.7SV4PL Arachis hypogaea HOM05D006821 ORTHO05D008740 4.1e-61 238.8 226 54.9
DCAR_029732 Daucus carota HOM05D006821 ORTHO05D008740 1.2e-60 237.3 223 56.1
Carub.0006s2610 Capsella rubella HOM05D006821 ORTHO05D008740 1.5e-60 236.9 225 58.2
Glyma.19G244500 Glycine max HOM05D006821 ORTHO05D008740 1.5e-60 236.9 225 56.0
Potri.013G040500 Populus trichocarpa HOM05D006821 ORTHO05D008740 1.5e-60 236.9 229 53.7
SalBow4G1195 Salvia bowleyana HOM05D006821 ORTHO05D008740 1.5e-60 236.9 226 56.6
SalBow4G2420 Salvia bowleyana HOM05D006821 ORTHO05D008740 1.5e-60 236.9 226 56.6
ATR0606G003 Amborella trichopoda HOM05D006821 ORTHO05D008740 2.6e-60 236.1 228 57.0
CsaV3_2G004180 Cucumis sativus L. HOM05D006821 ORTHO05D008740 3.5e-60 235.7 225 55.1
PGR004G1103 Punica granatum HOM05D006821 ORTHO05D008740 1.3e-59 233.8 225 53.3
BraA09t36137Z Brassica rapa HOM05D006821 ORTHO05D008740 1.7e-59 233.4 225 56.4
BcaC04g23721 Brassica carinata HOM05D006821 ORTHO05D008740 2.2e-59 233.0 225 55.1
C09p05380 Brassica napus HOM05D006821 ORTHO05D008740 2.2e-59 233.0 225 55.1
ClCG02G016590 Citrullus lanatus HOM05D006821 ORTHO05D008740 2.9e-59 232.6 225 53.3
AT5G28830 Arabidopsis thaliana HOM05D006821 ORTHO05D008740 3.8e-59 232.3 221 57.5
A09p04980 Brassica napus HOM05D006821 ORTHO05D008740 3.8e-59 232.3 225 56.4
AL6G40810 Arabidopsis lyrata HOM05D006821 ORTHO05D008740 5.0e-59 231.9 224 55.8
BolC9t53466H Brassica oleracea HOM05D006821 ORTHO05D008740 5.0e-59 231.9 225 54.7
Glyma.03G246900 Glycine max HOM05D006821 ORTHO05D008740 5.0e-59 231.9 225 55.1
BcaB04g19632 Brassica carinata HOM05D006821 ORTHO05D008740 8.5e-59 231.1 225 56.4
Aa31LG11G8550 Aethionema arabicum HOM05D006821 ORTHO05D008740 4.2e-58 228.8 225 55.6
CARHR185340 Cardamine hirsuta HOM05D006821 ORTHO05D008740 4.2e-58 228.8 225 54.7
Lj7A490T61 Lonicera japonica HOM05D006821 ORTHO05D008740 7.2e-58 228.0 280 46.1
Sed0012709 Sechium edule HOM05D006821 ORTHO05D008740 9.4e-58 227.6 225 53.3
Ca_09420_v3 Cicer arietinum L. HOM05D006821 ORTHO05D008740 1.6e-57 226.9 228 53.9
HPP92_024348 Vanilla planifolia HOM05D006821 ORTHO05D008740 8.0e-57 224.6 222 54.1
SEGI_00561 Sequoiadendron giganteum HOM05D006821 ORTHO05D008740 1.8e-56 223.4 235 52.8
CDE07G0065 Ceratophyllum demersum HOM05D006821 ORTHO05D008740 8.8e-56 221.1 225 53.3
Medtr7g115070 Medicago truncatula HOM05D006821 ORTHO05D008740 8.8e-56 221.1 232 52.6
Phvul.006G101500 Phaseolus vulgaris HOM05D006821 ORTHO05D008740 8.8e-56 221.1 227 52.4
Lalb_Chr04g0262251 Lupinus albus HOM05D006821 ORTHO05D008740 1.5e-55 220.3 225 51.1
CDE04G3363 Ceratophyllum demersum HOM05D006821 ORTHO05D008740 2.0e-55 219.9 225 53.3
Psat2g125040 Pisum sativum HOM05D006821 ORTHO05D008740 7.4e-55 218.0 225 52.0
VMungo0540G1649 Vigna mungo HOM05D006821 ORTHO05D008740 1.1e-53 214.2 227 49.8
Cpa.g.sc117.86 Carica papaya HOM05D006821 ORTHO05D008740 3.2e-50 202.6 199 53.8
MELO3C004376.2 Cucumis melo HOM05D006821 ORTHO05D008740 2.0e-47 193.4 225 48.9
TPR.G6944 Trifolium pratense HOM05D006821 ORTHO05D008740 2.0e-47 193.4 196 55.1
Dinv04728 Davidia involucrata HOM05D006821 ORTHO05D008740 1.7e-43 180.3 109 79.8
Mapoly0083s0056 Marchantia polymorpha HOM05D006821 ORTHO05D008740 2.7e-41 172.9 230 40.4
Pp3c20_9750 Physcomitrium patens HOM05D006821 ORTHO05D008740 3.0e-40 169.5 228 41.7
AagrBONN_evm.TU.Sc2ySwM_228.4858 Anthoceros agrestis HOM05D006821 ORTHO05D007268 9.2e-29 131.3 219 36.1
SMO259G0008 Selaginella moellendorffii HOM05D006821 ORTHO05D008740 9.5e-26 121.3 128 46.9
CBR_g10979 Chara braunii HOM05D006821 ORTHO05D008740 1.3e-22 110.9 157 39.5
Ah.07g201960 Amaranthus hybridus HOM05D006821 ORTHO05D008740 2.0e-20 103.6 213 30.0
AagrBONN_evm.TU.Sc2ySwM_228.4145 Anthoceros agrestis HOM05D006821 ORTHO05D008740 3.3e-18 96.3 164 36.0
CARHR032970 Cardamine hirsuta HOM05D006821 ORTHO05D008740 1.1e-13 81.3 55 72.7
SMO169G0202 Selaginella moellendorffii HOM05D004759 ORTHO05D005722 7.8e-12 75.1 165 29.7
TAR365G0108 Trochodendron aralioides HOM05D006821 ORTHO05D008740 3.3e-10 69.7 128 35.9
MELO3C028972.2 Cucumis melo HOM05D006821 ORTHO05D034973 4.0e-08 62.8 72 51.4
AUR62013108 Chenopodium quinoa HOM05D004759 ORTHO05D005722 1.2e-07 61.2 124 29.0
Ah.01g009490 Amaranthus hybridus HOM05D004759 ORTHO05D005722 1.5e-07 60.8 128 27.3
AUR62010113 Chenopodium quinoa HOM05D004759 ORTHO05D005722 2.0e-07 60.5 124 29.0
EL10Ac9g21461 Beta vulgaris HOM05D004759 ORTHO05D005722 5.8e-07 58.9 124 27.4
Thhalv10025463m.g Eutrema salsugineum HOM05D004759 ORTHO05D005722 2.2e-06 57.0 174 22.4
unitig_61.g26436 Utricularia gibba HOM05D001532 ORTHO05D001402 2.2e-06 57.0 112 29.5
Aa31LG6G16400 Aethionema arabicum HOM05D004759 ORTHO05D005722 3.7e-06 56.2 125 28.8
Mapoly0103s0051 Marchantia polymorpha HOM05D004759 ORTHO05D005722 8.4e-06 55.1 177 25.4


User provided reference genes

Program Settings