Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G3104 Papaver somniferum HOM05D006274 ORTHO05D007782 1.1e-96 356.7 183 100.0
PSO170G6492 Papaver somniferum HOM05D006274 ORTHO05D007782 2.0e-87 325.9 186 91.9
TAR381G0542 Trochodendron aralioides HOM05D006274 ORTHO05D007782 7.0e-64 247.7 185 76.8
Haze_22342 Corylus avellana HOM05D006274 ORTHO05D007782 5.2e-59 231.5 182 72.0
Cfa013698 Carpinus fangiana HOM05D006274 ORTHO05D007782 2.0e-58 229.6 193 68.4
Ciclev10002605m.g Citrus clementina HOM05D006274 ORTHO05D007782 2.6e-58 229.2 186 69.4
CiPaw.07G167900 Carya illinoinensis HOM05D006274 ORTHO05D007782 9.9e-58 227.3 192 66.1
Glyma.04G092700 Glycine max HOM05D006274 ORTHO05D007782 9.9e-58 227.3 170 72.9
Thecc.08G068200 Theobroma cacao HOM05D006274 ORTHO05D007782 1.3e-57 226.9 194 68.0
Ca_22436_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 1.7e-57 226.5 171 74.3
TWI56G1401 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 1.7e-57 226.5 194 65.5
VMungo1309G0647 Vigna mungo HOM05D006274 ORTHO05D007782 2.2e-57 226.1 177 71.2
Lsat_1_v5_gn_9_74940 Lactuca sativa HOM05D006274 ORTHO05D007782 2.9e-57 225.7 178 71.9
Hma1.2p1_0010F.1_g006970 Hydrangea macrophylla HOM05D006274 ORTHO05D007782 4.9e-57 224.9 186 69.9
Phvul.009G143300 Phaseolus vulgaris HOM05D006274 ORTHO05D007782 4.9e-57 224.9 178 71.3
Medtr3g100630 Medicago truncatula HOM05D006274 ORTHO05D007782 6.4e-57 224.6 170 72.4
Lj1g0015671 Lotus japonicus HOM05D006274 ORTHO05D007782 1.9e-56 223.0 174 69.0
CSS0028463 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 2.4e-56 222.6 185 68.6
CSS0045542 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 3.2e-56 222.2 184 67.9
Prupe.1G528000 Prunus persica HOM05D006274 ORTHO05D007782 3.2e-56 222.2 187 65.2
Cc10_g15630 Coffea canephora HOM05D006274 ORTHO05D007782 4.1e-56 221.9 189 66.7
Glyma.06G094500 Glycine max HOM05D006274 ORTHO05D007782 5.4e-56 221.5 170 71.2
Lalb_Chr08g0242401 Lupinus albus HOM05D006274 ORTHO05D007782 7.1e-56 221.1 169 70.4
MBI02_g18284_MAGBIO Magnolia biondii HOM05D006274 ORTHO05D007782 7.1e-56 221.1 179 70.4
PGR031G0701 Punica granatum HOM05D006274 ORTHO05D007782 3.5e-55 218.8 178 68.0
QL09p017221 Quercus lobata HOM05D006274 ORTHO05D007782 4.6e-55 218.4 181 69.6
Potri.002G103700 Populus trichocarpa HOM05D006274 ORTHO05D007782 1.3e-54 216.9 196 61.7
Hund27007 Selenicereus undatus HOM05D006274 ORTHO05D007782 1.3e-54 216.9 177 67.2
TPR.G26025 Trifolium pratense HOM05D006274 ORTHO05D007782 2.3e-54 216.1 173 68.8
Duzib116G0317 Durio zibethinus HOM05D006274 ORTHO05D007782 3.9e-54 215.3 183 67.8
SGA_v2.0_scaffold10G05208 Striga asiatica HOM05D006274 ORTHO05D007782 3.9e-54 215.3 181 66.9
Nn5g29933 Nelumbo nucifera HOM05D006274 ORTHO05D007782 5.1e-54 214.9 177 67.2
Oeu024592.1 Olea europaea HOM05D006274 ORTHO05D007782 5.1e-54 214.9 178 68.5
SalBow6G3082 Salvia bowleyana HOM05D006274 ORTHO05D007782 5.1e-54 214.9 179 68.7
THA.LOC104820685 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 5.1e-54 214.9 189 64.6
BcaC02g11449 Brassica carinata HOM05D006274 ORTHO05D007782 8.6e-54 214.2 170 68.2
BolC4t23114H Brassica oleracea HOM05D006274 ORTHO05D007782 8.6e-54 214.2 170 68.2
ECA232G3909 Erigeron canadensis HOM05D006274 ORTHO05D007782 8.6e-54 214.2 169 69.2
MD08G1193500 Malus domestica HOM05D006274 ORTHO05D007782 1.5e-53 213.4 190 61.6
Actinidia19642 Actinidia chinensis HOM05D006274 ORTHO05D007782 2.5e-53 212.6 195 65.1
Migut.J00587 Erythranthe guttata HOM05D006274 ORTHO05D007782 2.5e-53 212.6 183 65.0
MSTRG.19530 Avicennia marina HOM05D006274 ORTHO05D007782 3.3e-53 212.2 180 66.7
Sc01g0001050 Simmondsia chinensis HOM05D006274 ORTHO05D007782 3.3e-53 212.2 182 64.3
Sopen00g007030 Solanum pennellii HOM05D006274 ORTHO05D007782 3.3e-53 212.2 181 66.9
Sopen00g007710 Solanum pennellii HOM05D006274 ORTHO05D007782 3.3e-53 212.2 181 66.9
PGSC0003DMG400012912 Solanum tuberosum HOM05D006274 ORTHO05D007782 3.3e-53 212.2 179 67.0
EL10Ac1g01111 Beta vulgaris HOM05D006274 ORTHO05D007782 5.6e-53 211.5 180 67.8
A05p11860 Brassica napus HOM05D006274 ORTHO05D007782 5.6e-53 211.5 170 67.1
Solyc04g076050.4 Solanum lycopersicum HOM05D006274 ORTHO05D007782 5.6e-53 211.5 180 66.7
C04p15430 Brassica napus HOM05D006274 ORTHO05D007782 9.5e-53 210.7 172 67.4
GSVIVG01009140001 Vitis vinifera HOM05D006274 ORTHO05D007782 2.1e-52 209.5 166 69.9
ATR0022G028 Amborella trichopoda HOM05D006274 ORTHO05D007782 3.6e-52 208.8 180 65.6
Sed0009042 Sechium edule HOM05D006274 ORTHO05D007782 4.7e-52 208.4 178 64.6
CsaV3_2G030110 Cucumis sativus L. HOM05D006274 ORTHO05D007782 6.2e-52 208.0 186 62.4
Aa31LG9G13640 Aethionema arabicum HOM05D006274 ORTHO05D007782 1.1e-51 207.2 186 64.5
HanXRQChr09g0249401 Helianthus annuus HOM05D006274 ORTHO05D007782 1.4e-51 206.8 178 66.9
Aqoxy5G01327 Aquilegia oxysepala HOM05D006274 ORTHO05D007782 1.8e-51 206.5 175 65.7
FAN04G0860 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.8e-51 206.5 197 60.9
THA.LOC104814210 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 1.8e-51 206.5 174 66.1
Manes.18G061000 Manihot esculenta HOM05D006274 ORTHO05D007782 3.1e-51 205.7 180 63.3
BraA05t20127Z Brassica rapa HOM05D006274 ORTHO05D007782 4.0e-51 205.3 172 66.3
Ca_15989_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 4.0e-51 205.3 156 73.7
MD15G1382000 Malus domestica HOM05D006274 ORTHO05D007782 4.0e-51 205.3 176 62.5
Thhalv10017289m.g Eutrema salsugineum HOM05D006274 ORTHO05D007782 6.8e-51 204.5 190 62.6
unitig_26.g9169 Utricularia gibba HOM05D006274 ORTHO05D007782 6.8e-51 204.5 175 64.0
FvH4_5g35790 Fragaria vesca HOM05D006274 ORTHO05D007782 1.2e-50 203.8 197 60.4
vmacro04670 Vaccinium macrocarpon HOM05D006274 ORTHO05D007782 1.2e-50 203.8 194 63.9
BcaB02g10587 Brassica carinata HOM05D006274 ORTHO05D007782 1.5e-50 203.4 170 68.2
ClCG08G011520 Citrullus lanatus HOM05D006274 ORTHO05D007782 1.5e-50 203.4 208 56.7
Dinv44839 Davidia involucrata HOM05D006274 ORTHO05D007782 4.4e-50 201.8 196 63.8
Gohir.D06G032400 Gossypium hirsutum HOM05D006274 ORTHO05D007782 5.8e-50 201.4 183 63.4
FAN18G0017 Fragaria x ananassa HOM05D006274 ORTHO05D007782 7.6e-50 201.1 193 60.6
Eucgr.F02129 Eucalyptus grandis HOM05D006274 ORTHO05D007782 9.9e-50 200.7 182 61.0
Carub.0004s1538 Capsella rubella HOM05D006274 ORTHO05D007782 1.3e-49 200.3 170 67.6
AT2G33740 Arabidopsis thaliana HOM05D006274 ORTHO05D007782 2.2e-49 199.5 173 65.3
CDE10G0432 Ceratophyllum demersum HOM05D006274 ORTHO05D007782 2.2e-49 199.5 168 64.9
Gorai.010G035700 Gossypium raimondii HOM05D006274 ORTHO05D007782 2.9e-49 199.1 183 62.8
Nitab4.5_0010618g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 6.4e-49 198.0 171 66.1
RcHm_v2.0_Chr7g0237451 Rosa chinensis HOM05D006274 ORTHO05D007782 6.4e-49 198.0 173 63.0
Sp4g16090 Schrenkiella parvula HOM05D006274 ORTHO05D007782 6.4e-49 198.0 171 66.7
AL4G29430 Arabidopsis lyrata HOM05D006274 ORTHO05D007782 1.1e-48 197.2 186 62.4
CARHR127760 Cardamine hirsuta HOM05D006274 ORTHO05D007782 1.9e-48 196.4 184 62.0
Hund16871 Selenicereus undatus HOM05D006274 ORTHO05D007782 3.2e-48 195.7 175 65.1
Nn1g05513 Nelumbo nucifera HOM05D006274 ORTHO05D007782 4.1e-48 195.3 174 63.2
TWI12G0161 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 1.6e-47 193.4 113 82.3
DCAR_012863 Daucus carota HOM05D006274 ORTHO05D007782 1.3e-46 190.3 113 81.4
Sopen00g004300 Solanum pennellii HOM05D006274 ORTHO05D007782 1.3e-46 190.3 112 84.8
Cpa.g.sc309.7 Carica papaya HOM05D006274 ORTHO05D007782 3.0e-46 189.1 178 61.8
AUR62019013 Chenopodium quinoa HOM05D006274 ORTHO05D007782 3.9e-46 188.7 113 82.3
Zm00001eb006540 Zea mays HOM05D006274 ORTHO05D007782 3.9e-46 188.7 167 61.1
Gohir.A06G032628 Gossypium hirsutum HOM05D006274 ORTHO05D007782 5.1e-46 188.3 113 83.2
AUR62027854 Chenopodium quinoa HOM05D006274 ORTHO05D007782 6.6e-46 188.0 113 82.3
Os10g0378300 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 1.9e-45 186.4 112 80.4
Dinv42635 Davidia involucrata HOM05D006274 ORTHO05D007782 3.3e-45 185.7 187 63.1
MELO3C011069.2 Cucumis melo HOM05D006274 ORTHO05D007782 4.3e-45 185.3 204 55.4
Os03g0186950 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 4.3e-45 185.3 129 71.3
Peaxi162Scf00281g00415 Petunia axillaris HOM05D006274 ORTHO05D007782 1.6e-44 183.3 170 63.5
Sabra02G0081200 Salix brachista HOM05D006274 ORTHO05D007782 2.1e-44 183.0 233 48.9
MSTRG.6044 Avicennia marina HOM05D006274 ORTHO05D007782 4.7e-44 181.8 113 79.6
Gohir.A05G218200 Gossypium hirsutum HOM05D006274 ORTHO05D007782 8.1e-44 181.0 113 77.9
CAN.G1658.2 Capsicum annuum HOM05D006274 ORTHO05D007782 6.9e-43 177.9 118 78.0
Gorai.009G231100 Gossypium raimondii HOM05D006274 ORTHO05D007782 6.9e-43 177.9 113 77.0
arahy.Tifrunner.gnm1.ann1.SMA5HD Arachis hypogaea HOM05D006274 ORTHO05D007782 9.0e-43 177.6 143 69.9
arahy.Tifrunner.gnm1.ann1.44X20L Arachis hypogaea HOM05D006274 ORTHO05D007782 1.2e-42 177.2 143 69.9
Nitab4.5_0001507g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 4.4e-42 175.3 182 59.9
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 3.8e-41 172.2 139 65.5
Actinidia29612 Actinidia chinensis HOM05D006274 ORTHO05D007782 5.4e-40 168.3 170 59.4
FAN13G2708 Fragaria x ananassa HOM05D006274 ORTHO05D007782 8.1e-36 154.5 92 79.3
Gohir.D05G223833 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.1e-35 154.1 113 69.9
FAN08G3216 Fragaria x ananassa HOM05D006274 ORTHO05D007782 6.9e-35 151.4 92 78.3
Atru.chr13.1045 Acer truncatum HOM05D006274 ORTHO05D007782 8.4e-33 144.4 84 84.5
SMO119G0339 Selaginella moellendorffii HOM05D006274 ORTHO05D007782 8.4e-33 144.4 110 61.8
HPP92_002219 Vanilla planifolia HOM05D006274 ORTHO05D007782 1.1e-32 144.1 154 51.3
Mapoly0011s0077 Marchantia polymorpha HOM05D006274 ORTHO05D007782 2.1e-31 139.8 110 60.9
Sed0010188 Sechium edule HOM05D006274 ORTHO05D007782 3.5e-31 139.0 95 72.6
SEGI_33866 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 1.9e-29 133.3 100 61.0
CBR_g39263 Chara braunii HOM05D002374 ORTHO05D003594 2.8e-28 129.4 110 57.3
Rhsim07G0210300 Rhododendron simsii HOM05D006274 ORTHO05D007782 3.7e-28 129.0 70 85.7
SEGI_16140 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 9.0e-27 124.4 90 64.4
Cre02.g082350 Chlamydomonas reinhardtii HOM05D006274 ORTHO05D007782 2.6e-26 122.9 97 60.8
PRCOL_00002052 Prasinoderma coloniale HOM05D006274 ORTHO05D007782 3.8e-25 119.0 94 60.6
Psat5g045880 Pisum sativum HOM05D006274 ORTHO05D007782 4.9e-25 118.6 141 57.4
EL10Ac9g22466 Beta vulgaris HOM05D006274 ORTHO05D007782 1.1e-24 117.5 70 78.6
CANSAT64G0910 Cannabis sativa HOM05D006274 ORTHO05D007782 1.4e-24 117.1 119 58.8
AagrBONN_evm.TU.Sc2ySwM_228.3755 Anthoceros agrestis HOM05D006274 ORTHO05D007782 3.0e-22 109.4 122 50.0
Pp3c21_2600 Physcomitrium patens HOM05D006274 ORTHO05D007782 1.1e-21 107.5 106 50.9
CBR_g7959 Chara braunii HOM05D006274 ORTHO05D007782 6.9e-19 98.2 92 55.4
Ca_28793_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 4.2e-08 62.4 96 32.3


User provided reference genes

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