Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G2970 Papaver somniferum HOM05D006775 ORTHO05D008344 2.5e-89 332.0 163 100.0
PSO832G0266 Papaver somniferum HOM05D006775 ORTHO05D008344 5.0e-61 238.0 125 95.2
Dinv38323 Davidia involucrata HOM05D006775 ORTHO05D008344 1.8e-23 113.2 111 50.5
Cpa.g.sc1008.3 Carica papaya HOM05D006775 ORTHO05D008344 4.1e-23 112.1 115 47.8
CANSAT78G0382 Cannabis sativa HOM05D006775 ORTHO05D008344 1.2e-22 110.5 107 53.3
Lsat_1_v5_gn_5_50761 Lactuca sativa HOM05D006775 ORTHO05D008344 1.6e-22 110.2 110 50.0
Nn3g21322 Nelumbo nucifera HOM05D006775 ORTHO05D008344 7.8e-22 107.8 106 46.2
MBI18_g12413_MAGBIO Magnolia biondii HOM05D006775 ORTHO05D008344 1.0e-21 107.5 107 49.5
TWI09G0159 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 1.3e-21 107.1 118 47.5
Aqoxy5G01958 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 2.3e-21 106.3 103 47.6
TWI09G0706 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 2.3e-21 106.3 118 46.6
Nitab4.5_0005595g0020 Nicotiana tabacum HOM05D006775 ORTHO05D008344 2.9e-21 105.9 114 47.4
HanXRQChr03g0079491 Helianthus annuus HOM05D006775 ORTHO05D008344 5.0e-21 105.1 108 44.4
Atru.chr4.2756 Acer truncatum HOM05D006775 ORTHO05D008344 1.1e-20 104.0 117 41.0
MSTRG.10056 Avicennia marina HOM05D006775 ORTHO05D008344 1.5e-20 103.6 129 44.2
Cc03_g02340 Coffea canephora HOM05D006775 ORTHO05D008344 1.5e-20 103.6 113 46.0
SGA_v2.0_scaffold57G20240 Striga asiatica HOM05D006775 ORTHO05D008344 1.9e-20 103.2 122 43.4
Lj3A812T71 Lonicera japonica HOM05D006775 ORTHO05D008344 5.6e-20 101.7 115 45.2
TAR633G2345 Trochodendron aralioides HOM05D001386 ORTHO05D003791 1.6e-19 100.1 102 50.0
PGSC0003DMG400022660 Solanum tuberosum HOM05D006775 ORTHO05D008344 3.6e-19 99.0 110 47.3
Actinidia40225 Actinidia chinensis HOM05D006775 ORTHO05D008344 6.1e-19 98.2 106 46.2
ECA240G4404 Erigeron canadensis HOM05D006775 ORTHO05D008344 8.0e-19 97.8 102 44.1
DCAR_002444 Daucus carota HOM05D006775 ORTHO05D008344 1.0e-18 97.4 116 44.0
Eucgr.H03770 Eucalyptus grandis HOM05D006775 ORTHO05D008344 1.0e-18 97.4 108 45.4
Potri.008G204800 Populus trichocarpa HOM05D006775 ORTHO05D008344 1.4e-18 97.1 115 44.3
Solyc01g067280.3 Solanum lycopersicum HOM05D006775 ORTHO05D008344 1.4e-18 97.1 110 44.5
EL10Ac3g06567 Beta vulgaris HOM05D006775 ORTHO05D008344 1.8e-18 96.7 103 48.5
Cfa015346 Carpinus fangiana HOM05D006775 ORTHO05D008344 2.3e-18 96.3 115 46.1
SalBow2G3406 Salvia bowleyana HOM05D006775 ORTHO05D008344 2.3e-18 96.3 130 40.8
Sc25g0004760 Simmondsia chinensis HOM05D006775 ORTHO05D008344 4.0e-18 95.5 111 44.1
Manes.15G016600 Manihot esculenta HOM05D006775 ORTHO05D008344 5.2e-18 95.1 118 43.2
A01p21970 Brassica napus HOM05D006775 ORTHO05D008344 6.8e-18 94.7 115 44.3
BraA01t02103Z Brassica rapa HOM05D006775 ORTHO05D008344 6.8e-18 94.7 115 44.3
C01p27330 Brassica napus HOM05D006775 ORTHO05D008344 8.9e-18 94.4 115 44.3
BolC1t02676H Brassica oleracea HOM05D006775 ORTHO05D008344 8.9e-18 94.4 115 44.3
Sp7g13860 Schrenkiella parvula HOM05D006775 ORTHO05D008344 8.9e-18 94.4 114 42.1
COL.COLO4_13925 Corchorus olitorius HOM05D006775 ORTHO05D008344 1.2e-17 94.0 125 40.8
BcaC09g50254 Brassica carinata HOM05D001154 ORTHO05D001175 1.5e-17 93.6 104 46.2
Carub.0007s2625 Capsella rubella HOM05D006775 ORTHO05D008344 2.0e-17 93.2 103 47.6
Sopen01g029070 Solanum pennellii HOM05D006775 ORTHO05D008344 2.0e-17 93.2 110 43.6
Hma1.2p1_0823F.1_g224630 Hydrangea macrophylla HOM05D006775 ORTHO05D008344 2.6e-17 92.8 110 44.5
CARHR289990 Cardamine hirsuta HOM05D006775 ORTHO05D008344 4.4e-17 92.0 104 45.2
VMungo1215G1959 Vigna mungo HOM05D006775 ORTHO05D008344 5.8e-17 91.7 116 42.2
Migut.G00207 Erythranthe guttata HOM05D006775 ORTHO05D008344 9.8e-17 90.9 127 37.0
Phvul.003G101000 Phaseolus vulgaris HOM05D006775 ORTHO05D008344 1.3e-16 90.5 105 41.9
PGR004G1240 Punica granatum HOM05D006775 ORTHO05D008344 1.3e-16 90.5 122 39.3
AUR62042989 Chenopodium quinoa HOM05D006775 ORTHO05D008344 2.9e-16 89.4 101 46.5
Ciclev10006777m.g Citrus clementina HOM05D000611 ORTHO05D000809 2.9e-16 89.4 106 41.5
Aa31LG9G1860 Aethionema arabicum HOM05D006775 ORTHO05D008344 3.7e-16 89.0 104 42.3
Sabra08G0157200 Salix brachista HOM05D006775 ORTHO05D008344 3.7e-16 89.0 115 42.6
MELO3C006607.2 Cucumis melo HOM05D006775 ORTHO05D008344 4.9e-16 88.6 109 45.0
Duzib212G0132 Durio zibethinus HOM05D006775 ORTHO05D008344 6.4e-16 88.2 115 40.9
QL06p007489 Quercus lobata HOM05D006775 ORTHO05D008344 6.4e-16 88.2 114 40.4
BcaNung00261 Brassica carinata HOM05D006775 ORTHO05D008344 1.1e-15 87.4 115 42.6
CiPaw.02G086400 Carya illinoinensis HOM05D006775 ORTHO05D008344 1.4e-15 87.0 108 38.9
Nn4g25991 Nelumbo nucifera HOM05D006775 ORTHO05D008344 1.4e-15 87.0 91 39.6
MD00G1092600 Malus domestica HOM05D006775 ORTHO05D008344 1.9e-15 86.7 107 42.1
CsaV3_3G014150 Cucumis sativus L. HOM05D006775 ORTHO05D008344 5.4e-15 85.1 111 42.3
Nitab4.5_0003256g0010 Nicotiana tabacum HOM05D006775 ORTHO05D008344 5.4e-15 85.1 113 41.6
Thecc.04G277900 Theobroma cacao HOM05D006775 ORTHO05D008344 5.4e-15 85.1 129 37.2
ClCG05G005800 Citrullus lanatus HOM05D006775 ORTHO05D008344 9.2e-15 84.3 109 42.2
Glyma.07G251400 Glycine max HOM05D006775 ORTHO05D008344 1.2e-14 84.0 105 39.0
GSVIVG01017799001 Vitis vinifera HOM05D000611 ORTHO05D000809 2.0e-14 83.2 118 41.5
Duzib151G0911 Durio zibethinus HOM05D006775 ORTHO05D008344 3.5e-14 82.4 105 41.9
HPP92_025211 Vanilla planifolia HOM05D006775 ORTHO05D008344 4.6e-14 82.0 113 38.1
HPP92_025229 Vanilla planifolia HOM05D006775 ORTHO05D008344 6.0e-14 81.6 113 38.1
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 1.0e-13 80.9 90 46.7
Gohir.A09G233400 Gossypium hirsutum HOM05D006775 ORTHO05D008344 2.3e-13 79.7 115 38.3
Gohir.D09G234500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 2.3e-13 79.7 162 34.0
Medtr4g118790 Medicago truncatula HOM05D006775 ORTHO05D008344 3.0e-13 79.3 104 40.4
RcHm_v2.0_Chr6g0302841 Rosa chinensis HOM05D006775 ORTHO05D008344 6.6e-13 78.2 104 40.4
arahy.Tifrunner.gnm1.ann1.HV9WHL Arachis hypogaea HOM05D006775 ORTHO05D008344 8.6e-13 77.8 105 39.0
Glyma.17G022900 Glycine max HOM05D006775 ORTHO05D008344 1.5e-12 77.0 105 36.2
CDE08G1672 Ceratophyllum demersum HOM05D006775 ORTHO05D008344 1.9e-12 76.6 105 38.1
TPR.G14956 Trifolium pratense HOM05D006775 ORTHO05D008344 1.9e-12 76.6 105 39.0
vmacro08201 Vaccinium macrocarpon HOM05D006775 ORTHO05D008344 1.9e-12 76.6 89 40.4
arahy.Tifrunner.gnm1.ann1.UNR197 Arachis hypogaea HOM05D006775 ORTHO05D008344 2.5e-12 76.3 107 37.4
FAN20G0357 Fragaria x ananassa HOM05D006775 ORTHO05D008344 3.3e-12 75.9 104 38.5
Gorai.006G257400 Gossypium raimondii HOM05D006775 ORTHO05D008344 3.3e-12 75.9 162 33.3
Sed0012602 Sechium edule HOM05D006775 ORTHO05D008344 3.3e-12 75.9 104 37.5
ATR0706G197 Amborella trichopoda HOM05D006775 ORTHO05D008344 5.6e-12 75.1 106 36.8
Gohir.D10G166800 Gossypium hirsutum HOM05D006775 ORTHO05D008344 3.6e-11 72.4 115 33.9
Zm00001eb285420 Zea mays HOM05D006775 ORTHO05D008344 3.6e-11 72.4 102 35.3
THA.LOC104820238 Tarenaya hassleriana HOM05D006775 ORTHO05D008344 4.7e-11 72.0 109 37.6
Psat4g030480 Pisum sativum HOM05D006775 ORTHO05D008344 6.2e-11 71.6 104 34.6
FvH4_2g38460 Fragaria vesca HOM05D006775 ORTHO05D008344 8.0e-11 71.2 104 37.5
Haze_01266 Corylus avellana HOM05D006775 ORTHO05D008344 1.1e-10 70.9 66 53.0
Lalb_Chr13g0303871 Lupinus albus HOM05D006775 ORTHO05D008344 1.4e-10 70.5 107 33.6
Peaxi162Scf00386g00010 Petunia axillaris HOM05D006775 ORTHO05D008344 1.4e-10 70.5 109 38.5
Lj4g0016853 Lotus japonicus HOM05D006775 ORTHO05D008344 1.8e-10 70.1 115 33.9
Psat4g030400 Pisum sativum HOM05D006775 ORTHO05D008344 3.1e-10 69.3 104 33.7
Gohir.D10G153500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 5.2e-10 68.6 115 33.9
Gorai.011G186100 Gossypium raimondii HOM05D006775 ORTHO05D008344 2.0e-09 66.6 115 33.9
Duzib052G0853 Durio zibethinus HOM05D006775 ORTHO05D008344 2.6e-09 66.2 115 33.0
Os05g0372800 Oryza sativa ssp. japonica HOM05D006775 ORTHO05D008344 7.5e-09 64.7 103 34.0
unitig_32.g10786 Utricularia gibba HOM05D006775 ORTHO05D008344 1.7e-08 63.5 93 35.5
AagrBONN_evm.TU.Sc2ySwM_362.2565 Anthoceros agrestis HOM05D006775 ORTHO05D008344 8.3e-08 61.2 108 32.4


User provided reference genes

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