Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G0711 Papaver somniferum HOM05D000319 ORTHO05D005616 1.6e-146 522.7 256 100.0
PSO832G0193 Papaver somniferum HOM05D000319 ORTHO05D005616 1.1e-144 516.5 256 98.8
TWI18G1113 Tripterygium wilfordii HOM05D000319 ORTHO05D005616 3.0e-129 465.3 256 87.9
COL.COLO4_06081 Corchorus olitorius HOM05D000319 ORTHO05D005616 6.7e-129 464.2 256 88.3
Atru.chr5.1559 Acer truncatum HOM05D000319 ORTHO05D005616 1.5e-128 463.0 256 87.9
Gohir.D08G055800 Gossypium hirsutum HOM05D000319 ORTHO05D005616 9.7e-128 460.3 256 87.1
Gorai.004G056700 Gossypium raimondii HOM05D000319 ORTHO05D005616 1.7e-127 459.5 256 86.7
Nn1g02549 Nelumbo nucifera HOM05D000319 ORTHO05D005616 1.7e-127 459.5 254 87.8
Thecc.01G267900 Theobroma cacao HOM05D000319 ORTHO05D005616 1.7e-127 459.5 256 87.5
Gohir.A08G045400 Gossypium hirsutum HOM05D000319 ORTHO05D005616 2.2e-127 459.1 256 86.7
PGR044G1796 Punica granatum HOM05D000319 ORTHO05D005616 2.2e-127 459.1 256 85.5
Ah.11g049990 Amaranthus hybridus HOM05D000319 ORTHO05D005616 2.8e-127 458.8 256 86.3
Dinv34565 Davidia involucrata HOM05D000319 ORTHO05D005616 2.8e-127 458.8 256 86.3
Ciclev10021811m.g Citrus clementina HOM05D000319 ORTHO05D005616 4.8e-127 458.0 256 87.1
Duzib211G0655 Durio zibethinus HOM05D000319 ORTHO05D005616 6.3e-127 457.6 256 87.1
THA.LOC104825981 Tarenaya hassleriana HOM05D000319 ORTHO05D005616 6.3e-127 457.6 256 85.9
Lsat_1_v5_gn_9_8201 Lactuca sativa HOM05D000319 ORTHO05D005616 1.1e-126 456.8 256 86.3
TWI75G0800 Tripterygium wilfordii HOM05D000319 ORTHO05D005616 1.1e-126 456.8 256 85.9
GSVIVG01000718001 Vitis vinifera HOM05D000319 ORTHO05D005616 1.4e-126 456.4 256 87.1
Aqoxy5G00356 Aquilegia oxysepala HOM05D000319 ORTHO05D005616 2.4e-126 455.7 254 87.4
CSS0020063 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D005616 3.1e-126 455.3 256 85.9
Actinidia19981 Actinidia chinensis HOM05D000319 ORTHO05D005616 4.1e-126 454.9 256 85.9
Hma1.2p1_0760F.1_g214240 Hydrangea macrophylla HOM05D000319 ORTHO05D005616 4.1e-126 454.9 256 84.8
Cpa.g.sc52.96 Carica papaya HOM05D000319 ORTHO05D005616 9.1e-126 453.8 256 85.5
ClCG07G012250 Citrullus lanatus HOM05D000319 ORTHO05D005616 9.1e-126 453.8 256 86.3
Duzib138G1611 Durio zibethinus HOM05D000319 ORTHO05D005616 9.1e-126 453.8 256 86.3
CiPaw.06G060900 Carya illinoinensis HOM05D000319 ORTHO05D005616 1.2e-125 453.4 256 86.3
HanXRQChr15g0467021 Helianthus annuus HOM05D000319 ORTHO05D005616 1.2e-125 453.4 256 85.9
Rhsim13G0030900 Rhododendron simsii HOM05D000319 ORTHO05D005616 1.5e-125 453.0 256 86.3
Haze_11759 Corylus avellana HOM05D000319 ORTHO05D005616 2.6e-125 452.2 256 87.5
Thhalv10028900m.g Eutrema salsugineum HOM05D000319 ORTHO05D005616 2.6e-125 452.2 256 85.5
Potri.002G045200 Populus trichocarpa HOM05D000319 ORTHO05D005616 2.6e-125 452.2 256 85.2
Cfa008743 Carpinus fangiana HOM05D000319 ORTHO05D005616 4.5e-125 451.4 256 86.7
ECA247G3951 Erigeron canadensis HOM05D000319 ORTHO05D005616 4.5e-125 451.4 256 85.2
THA.LOC104801256 Tarenaya hassleriana HOM05D000319 ORTHO05D005616 4.5e-125 451.4 257 85.2
CiPaw.05G169400 Carya illinoinensis HOM05D000319 ORTHO05D005616 7.7e-125 450.7 256 86.3
EL10Ac5g10471 Beta vulgaris HOM05D000319 ORTHO05D005616 1.0e-124 450.3 256 84.0
Potri.005G218000 Populus trichocarpa HOM05D000319 ORTHO05D005616 1.7e-124 449.5 256 84.8
SalBow4G3161 Salvia bowleyana HOM05D000319 ORTHO05D005616 1.7e-124 449.5 256 85.2
MSTRG.18283 Avicennia marina HOM05D000319 ORTHO05D005616 2.2e-124 449.1 256 84.8
Ca_01047_v3 Cicer arietinum L. HOM05D000319 ORTHO05D005616 2.9e-124 448.7 256 84.4
MELO3C017843.2 Cucumis melo HOM05D000319 ORTHO05D005616 3.8e-124 448.4 256 85.2
arahy.Tifrunner.gnm1.ann1.69SMRU Arachis hypogaea HOM05D000319 ORTHO05D005616 6.5e-124 447.6 256 84.4
CANSAT56G1819 Cannabis sativa HOM05D000319 ORTHO05D005616 6.5e-124 447.6 256 84.8
SGA_v2.0_scaffold1G00552 Striga asiatica HOM05D000319 ORTHO05D005616 6.5e-124 447.6 256 84.8
TAR365G0186 Trochodendron aralioides HOM05D000319 ORTHO05D005616 6.5e-124 447.6 254 85.8
Actinidia09093 Actinidia chinensis HOM05D000319 ORTHO05D005616 1.1e-123 446.8 256 84.8
CsaV3_4G001900 Cucumis sativus L. HOM05D000319 ORTHO05D005616 1.1e-123 446.8 256 85.2
Sp6g02490 Schrenkiella parvula HOM05D000319 ORTHO05D005616 1.1e-123 446.8 256 84.4
Sc17g0001020 Simmondsia chinensis HOM05D000319 ORTHO05D005616 1.1e-123 446.8 256 83.6
RcHm_v2.0_Chr2g0134501 Rosa chinensis HOM05D000319 ORTHO05D005616 1.4e-123 446.4 256 85.5
Migut.D00371 Erythranthe guttata HOM05D000319 ORTHO05D005616 1.9e-123 446.0 256 84.0
Eucgr.K03315 Eucalyptus grandis HOM05D000319 ORTHO05D005616 2.5e-123 445.7 256 85.5
BcaB01g02475 Brassica carinata HOM05D000319 ORTHO05D005616 3.2e-123 445.3 256 84.4
Cc01_g18870 Coffea canephora HOM05D000319 ORTHO05D005616 3.2e-123 445.3 256 83.2
Nn3g19503 Nelumbo nucifera HOM05D000319 ORTHO05D005616 3.2e-123 445.3 259 84.2
Aa31LG5G2210 Aethionema arabicum HOM05D000319 ORTHO05D005616 4.2e-123 444.9 256 84.4
Prupe.3G092100 Prunus persica HOM05D000319 ORTHO05D005616 4.2e-123 444.9 256 85.2
Carub.0006s3456 Capsella rubella HOM05D000319 ORTHO05D005616 5.5e-123 444.5 256 84.0
Sed0023498 Sechium edule HOM05D000319 ORTHO05D005616 5.5e-123 444.5 256 84.0
Manes.14G005900 Manihot esculenta HOM05D000319 ORTHO05D005616 7.2e-123 444.1 256 84.4
Lj2A1160T39 Lonicera japonica HOM05D000319 ORTHO05D005616 9.4e-123 443.7 256 84.8
Manes.01G201800 Manihot esculenta HOM05D000319 ORTHO05D005616 9.4e-123 443.7 256 84.4
A09p02000 Brassica napus HOM05D000319 ORTHO05D000903 1.2e-122 443.4 253 84.6
AL6G50470 Arabidopsis lyrata HOM05D000319 ORTHO05D005616 1.6e-122 443.0 256 84.0
BcaC04g23998 Brassica carinata HOM05D000319 ORTHO05D000903 2.1e-122 442.6 253 84.6
C09p02100 Brassica napus HOM05D000319 ORTHO05D000903 2.1e-122 442.6 253 84.6
FvH4_6g29310 Fragaria vesca HOM05D000319 ORTHO05D005616 2.1e-122 442.6 256 85.5
MD17G1215900 Malus domestica HOM05D000319 ORTHO05D005616 2.7e-122 442.2 256 84.4
TPR.G37240 Trifolium pratense HOM05D000319 ORTHO05D005616 2.7e-122 442.2 256 83.6
A03p30990 Brassica napus HOM05D000319 ORTHO05D000903 3.6e-122 441.8 253 84.6
CARHR250870 Cardamine hirsuta HOM05D000319 ORTHO05D005616 3.6e-122 441.8 256 84.0
Gorai.001G242600 Gossypium raimondii HOM05D000319 ORTHO05D005616 3.6e-122 441.8 256 84.0
BcaB01g02030 Brassica carinata HOM05D000319 ORTHO05D005616 4.7e-122 441.4 253 84.2
BolC9t53140H Brassica oleracea HOM05D000319 ORTHO05D005616 7.9e-122 440.7 256 83.6
Lalb_Chr22g0350801 Lupinus albus HOM05D000319 ORTHO05D005616 7.9e-122 440.7 256 84.4
Medtr2g104110 Medicago truncatula HOM05D000319 ORTHO05D005616 1.8e-121 439.5 256 83.2
DCAR_018446 Daucus carota HOM05D000319 ORTHO05D005616 2.3e-121 439.1 256 82.8
Gohir.A07G208700 Gossypium hirsutum HOM05D000319 ORTHO05D005616 5.1e-121 438.0 256 83.2
Lj3g0018932 Lotus japonicus HOM05D000319 ORTHO05D005616 5.1e-121 438.0 256 82.4
MD17G1216000 Malus domestica HOM05D000319 ORTHO05D005616 6.7e-121 437.6 256 83.2
BraA09t35850Z Brassica rapa HOM05D000319 ORTHO05D000903 8.8e-121 437.2 253 83.8
AT4G02580 Arabidopsis thaliana HOM05D000319 ORTHO05D005616 1.1e-120 436.8 256 82.8
AUR62032260 Chenopodium quinoa HOM05D000319 ORTHO05D005616 1.5e-120 436.4 256 82.0
Phvul.005G179400 Phaseolus vulgaris HOM05D000319 ORTHO05D005616 2.0e-120 436.0 256 81.6
Hund09567 Selenicereus undatus HOM05D000319 ORTHO05D005616 3.3e-120 435.3 256 81.2
AUR62011945 Chenopodium quinoa HOM05D000319 ORTHO05D005616 1.3e-119 433.3 256 81.6
FAN14G4091 Fragaria x ananassa HOM05D000319 ORTHO05D005616 1.3e-119 433.3 263 82.9
BolC3t16066H Brassica oleracea HOM05D000319 ORTHO05D005616 1.7e-119 433.0 256 83.2
Gohir.D07G214600 Gossypium hirsutum HOM05D000319 ORTHO05D005616 1.7e-119 433.0 256 82.4
Nitab4.5_0003053g0020 Nicotiana tabacum HOM05D000319 ORTHO05D005616 1.7e-119 433.0 255 81.6
Sabra02G0036300 Salix brachista HOM05D000319 ORTHO05D005616 2.2e-119 432.6 307 72.0
Glyma.15G006400 Glycine max HOM05D000319 ORTHO05D005616 3.7e-119 431.8 256 81.2
Glyma.13G367000 Glycine max HOM05D000319 ORTHO05D005616 4.8e-119 431.4 256 80.9
Nitab4.5_0000187g0170 Nicotiana tabacum HOM05D000319 ORTHO05D005616 8.2e-119 430.6 255 80.8
BraA03t12276Z Brassica rapa HOM05D000319 ORTHO05D000903 1.1e-118 430.3 253 82.6
BcaC01g06747 Brassica carinata HOM05D000319 ORTHO05D000903 1.8e-118 429.5 253 83.4
C03p37760 Brassica napus HOM05D000319 ORTHO05D005616 1.8e-118 429.5 253 83.4
unitig_26.g10148 Utricularia gibba HOM05D000319 ORTHO05D005616 4.1e-118 428.3 256 81.6
CAN.G1072.4 Capsicum annuum HOM05D000319 ORTHO05D005616 9.1e-118 427.2 255 79.2
CDE06G1797 Ceratophyllum demersum HOM05D000319 ORTHO05D005616 1.2e-117 426.8 257 80.5
Sopen09g027620 Solanum pennellii HOM05D000319 ORTHO05D005616 5.9e-117 424.5 254 79.9
ATR0665G648 Amborella trichopoda HOM05D000319 ORTHO05D005616 5.0e-116 421.4 256 79.7
PGSC0003DMG400019303 Solanum tuberosum HOM05D000319 ORTHO05D005616 6.5e-116 421.0 254 78.7
CDE07G0560 Ceratophyllum demersum HOM05D000319 ORTHO05D005616 8.5e-116 420.6 257 79.0
Sed0021269 Sechium edule HOM05D000319 ORTHO05D005616 4.2e-115 418.3 256 80.5
FAN09G4049 Fragaria x ananassa HOM05D000319 ORTHO05D005616 9.4e-115 417.2 241 86.3
vmacro02626 Vaccinium macrocarpon HOM05D000319 ORTHO05D005616 2.7e-114 415.6 283 73.9
Psat5g303080 Pisum sativum HOM05D000319 ORTHO05D005616 3.0e-113 412.1 256 78.9
VMungo1080G0987 Vigna mungo HOM05D000319 ORTHO05D005616 2.8e-111 405.6 241 82.6
SGA_v2.0_scaffold138G35283 Striga asiatica HOM05D000319 ORTHO05D005616 4.8e-111 404.8 295 71.2
Os05g0509200 Oryza sativa ssp. japonica HOM05D000319 ORTHO05D005616 8.2e-111 404.1 270 72.6
Zm00001eb292370 Zea mays HOM05D000319 ORTHO05D005616 1.0e-108 397.1 233 79.0
HanXRQChr01g0006871 Helianthus annuus HOM05D000319 ORTHO05D005616 2.5e-107 392.5 268 74.3
Dinv22483 Davidia involucrata HOM05D000319 ORTHO05D005616 3.2e-107 392.1 220 86.4
SMO361G0598 Selaginella moellendorffii HOM05D000319 ORTHO05D005616 5.2e-105 384.8 232 77.6
MBI11_g38515_MAGBIO Magnolia biondii HOM05D000319 ORTHO05D005616 2.0e-104 382.9 260 75.0
AagrBONN_evm.TU.Sc2ySwM_368.222 Anthoceros agrestis HOM05D000319 ORTHO05D005616 5.7e-104 381.3 244 74.6
arahy.Tifrunner.gnm1.ann1.0F4L5T Arachis hypogaea HOM05D000319 ORTHO05D005616 4.1e-102 375.2 256 74.6
Mapoly0103s0061 Marchantia polymorpha HOM05D000319 ORTHO05D005616 5.3e-102 374.8 253 69.6
Pp3c14_11220 Physcomitrium patens HOM05D000319 ORTHO05D005616 9.1e-102 374.0 232 75.4
HPP92_010274 Vanilla planifolia HOM05D000319 ORTHO05D005616 1.3e-100 370.2 260 72.7
Pp3c2_9810 Physcomitrium patens HOM05D000319 ORTHO05D005616 6.5e-100 367.9 232 75.4
Pp3c2_9813 Physcomitrium patens HOM05D000319 ORTHO05D005616 6.5e-100 367.9 232 75.4
Duzib133G0192 Durio zibethinus HOM05D000319 ORTHO05D005616 2.7e-98 362.5 256 72.7
HPP92_010249 Vanilla planifolia HOM05D000319 ORTHO05D005616 1.4e-97 360.1 260 71.9
SEGI_22234 Sequoiadendron giganteum HOM05D000319 ORTHO05D005616 4.0e-97 358.6 200 83.5
Sabra05G0167100 Salix brachista HOM05D000319 ORTHO05D005616 1.2e-96 357.1 320 60.3
CBR_g10938 Chara braunii HOM05D000319 ORTHO05D005616 1.3e-95 353.6 235 71.1
CBR_g36360 Chara braunii HOM05D000319 ORTHO05D005616 5.4e-94 348.2 235 69.8
FAN02G2104 Fragaria x ananassa HOM05D000319 ORTHO05D005616 1.6e-93 346.7 241 75.5
BolC2t09938H Brassica oleracea HOM05D000319 ORTHO05D005616 7.0e-86 321.2 250 66.4
Oeu058799.1 Olea europaea HOM05D000319 ORTHO05D005616 1.6e-82 310.1 161 91.3
QL03p046056 Quercus lobata HOM05D000319 ORTHO05D005616 2.1e-82 309.7 160 91.9
PRCOL_00000415 Prasinoderma coloniale HOM05D000319 ORTHO05D005616 3.2e-78 295.8 248 57.3
Solyc09g065830.4 Solanum lycopersicum HOM05D000319 ORTHO05D005616 5.4e-78 295.0 162 84.0
BcaB05g23646 Brassica carinata HOM05D000319 ORTHO05D005616 6.2e-74 281.6 286 57.0
Lalb_Chr24g0395411 Lupinus albus HOM05D000319 ORTHO05D005616 5.2e-73 278.5 172 80.2
HPP92_010181 Vanilla planifolia HOM05D000319 ORTHO05D005616 5.2e-73 278.5 152 87.5
BcaC03g16149 Brassica carinata HOM05D000319 ORTHO05D005616 1.5e-72 276.9 201 68.7
SGA_v2.0_scaffold580G53039 Striga asiatica HOM05D000319 ORTHO05D005616 1.3e-71 273.9 162 83.3
Cre10.g450400 Chlamydomonas reinhardtii HOM05D000319 ORTHO05D005616 3.9e-68 262.3 232 51.3
FAN05G4646 Fragaria x ananassa HOM05D000319 ORTHO05D005616 1.7e-63 246.9 269 54.6
C02p39270 Brassica napus HOM05D000319 ORTHO05D021913 1.9e-54 216.9 135 76.3
CAN.G2529.1 Capsicum annuum HOM05D000319 ORTHO05D005616 2.4e-54 216.5 117 86.3
Carub.0006s0058 Capsella rubella HOM05D000319 ORTHO05D005616 3.5e-53 212.6 116 87.9
Cfa025181 Carpinus fangiana HOM05D000319 ORTHO05D005616 6.9e-49 198.4 194 46.4
Lj1A57T50 Lonicera japonica HOM05D000319 ORTHO05D005616 5.4e-46 188.7 121 76.9
Peaxi162Scf00049g02221 Petunia axillaris HOM05D000319 ORTHO05D005616 1.6e-45 187.2 101 89.1
Oeu002275.1 Olea europaea HOM05D000319 ORTHO05D005616 7.8e-45 184.9 165 61.2
CSS0010087 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D005616 1.3e-44 184.1 100 88.0
Haze_26296 Corylus avellana HOM05D000319 ORTHO05D005616 5.8e-40 168.7 211 44.5
Lalb_Chr24g0395401 Lupinus albus HOM05D000319 ORTHO05D005616 7.1e-38 161.8 84 86.9
Psat5g267520 Pisum sativum HOM05D000319 ORTHO05D005616 4.6e-37 159.1 83 85.5
Gohir.D03G127200 Gossypium hirsutum HOM05D000319 ORTHO05D005616 6.0e-37 158.7 89 83.1
Gorai.007G009700 Gossypium raimondii HOM05D000319 ORTHO05D005616 1.8e-36 157.1 83 88.0
Gohir.D08G101900 Gossypium hirsutum HOM05D000319 ORTHO05D005616 3.3e-35 152.9 89 80.9
Gorai.004G109900 Gossypium raimondii HOM05D000319 ORTHO05D005616 7.4e-35 151.8 89 79.8
Oeu058801.1 Olea europaea HOM05D000113 ORTHO05D010194 7.4e-35 151.8 101 75.2
Gorai.011G177500 Gossypium raimondii HOM05D000319 ORTHO05D015684 1.1e-33 147.9 89 78.7
Gohir.D11G034350 Gossypium hirsutum HOM05D000319 ORTHO05D015684 1.4e-33 147.5 75 89.3
Gorai.007G037200 Gossypium raimondii HOM05D000319 ORTHO05D015684 2.0e-32 143.7 81 84.0
Gohir.D02G148240 Gossypium hirsutum HOM05D000319 ORTHO05D015684 1.3e-31 141.0 81 82.7
QL03p046047 Quercus lobata HOM05D000319 ORTHO05D005616 3.8e-31 139.4 91 74.7
Gohir.A10G159900 Gossypium hirsutum HOM05D000319 ORTHO05D015684 1.1e-30 137.9 75 85.3
Gohir.A12G213400 Gossypium hirsutum HOM05D000319 ORTHO05D015684 1.1e-30 137.9 75 85.3
Gohir.D05G290500 Gossypium hirsutum HOM05D000319 ORTHO05D015684 1.1e-30 137.9 75 85.3
Gohir.D12G241200 Gossypium hirsutum HOM05D000319 ORTHO05D015684 1.1e-30 137.9 75 85.3
Gorai.008G258400 Gossypium raimondii HOM05D000319 ORTHO05D015684 1.4e-30 137.5 81 80.2
Gohir.A02G064600 Gossypium hirsutum HOM05D000319 ORTHO05D015684 4.2e-30 136.0 75 84.0
Gorai.005G095000 Gossypium raimondii HOM05D000319 ORTHO05D015684 1.3e-28 131.0 75 81.3
Gorai.003G111100 Gossypium raimondii HOM05D000319 ORTHO05D015684 2.5e-27 126.7 76 80.3
Psat2g121280 Pisum sativum HOM05D000319 ORTHO05D005616 1.3e-26 124.4 84 73.8
Gohir.D03G105033 Gossypium hirsutum HOM05D000319 ORTHO05D005616 1.6e-26 124.0 71 81.7
Psat4g011320 Pisum sativum HOM05D000319 ORTHO05D005616 1.0e-23 114.8 82 72.0
Lj1A57T51 Lonicera japonica HOM05D000319 ORTHO05D005616 1.3e-10 71.2 41 80.5
GSVIVG01013142001 Vitis vinifera HOM05D000319 ORTHO05D439463 1.1e-09 68.2 56 67.9
arahy.Tifrunner.gnm1.ann1.52VWXA Arachis hypogaea HOM05D000069 ORTHO05D086405 2.5e-06 57.0 30 86.7


User provided reference genes

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