Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3300 Papaver somniferum HOM05D007769 ORTHO05D009588 9.4e-34 146.4 78 100.0
PSO170G4501 Papaver somniferum HOM05D007769 ORTHO05D009588 9.4e-34 146.4 78 100.0
Lj5g0000132 Lotus japonicus HOM05D007769 ORTHO05D009588 1.8e-21 105.5 78 71.8
Medtr1g018020 Medicago truncatula HOM05D007769 ORTHO05D009588 2.4e-21 105.1 78 71.8
Aqoxy5G00863 Aquilegia oxysepala HOM05D007769 ORTHO05D009588 9.1e-21 103.2 79 73.4
Ca_13216_v3 Cicer arietinum L. HOM05D007769 ORTHO05D009588 9.1e-21 103.2 78 69.2
COL.COLO4_28504 Corchorus olitorius HOM05D007769 ORTHO05D009588 2.0e-20 102.1 75 73.3
Psat6g018200 Pisum sativum HOM05D007769 ORTHO05D009588 3.5e-20 101.3 78 67.9
Sed0024574 Sechium edule HOM05D007769 ORTHO05D009588 5.9e-20 100.5 78 71.8
TPR.G37744 Trifolium pratense HOM05D007769 ORTHO05D009588 7.7e-20 100.1 78 71.8
Manes.05G182100 Manihot esculenta HOM05D007769 ORTHO05D009588 1.3e-19 99.4 75 72.0
Potri.014G015866 Populus trichocarpa HOM05D007769 ORTHO05D009588 1.7e-19 99.0 75 72.0
PGR031G3105 Punica granatum HOM05D007769 ORTHO05D009588 1.7e-19 99.0 78 69.2
unitig_8.g5043 Utricularia gibba HOM05D007769 ORTHO05D009588 8.6e-19 96.7 75 69.3
THA.LOC104825778 Tarenaya hassleriana HOM05D007769 ORTHO05D009588 1.9e-18 95.5 75 72.0
Potri.002G118366 Populus trichocarpa HOM05D007769 ORTHO05D009588 2.5e-18 95.1 75 70.7
Gohir.D01G110800 Gossypium hirsutum HOM05D007769 ORTHO05D009588 3.3e-18 94.7 75 68.0
CiPaw.07G174700 Carya illinoinensis HOM05D007769 ORTHO05D009588 4.2e-18 94.4 75 66.7
Eucgr.F02251 Eucalyptus grandis HOM05D007769 ORTHO05D009588 4.2e-18 94.4 78 67.9
Gohir.D05G213500 Gossypium hirsutum HOM05D007769 ORTHO05D009588 4.2e-18 94.4 78 67.9
Gorai.009G220200 Gossypium raimondii HOM05D007769 ORTHO05D009588 4.2e-18 94.4 78 67.9
TWI56G0221 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 7.2e-18 93.6 74 71.6
TWI12G0690 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 2.8e-17 91.7 74 68.9
SalBow7G0030 Salvia bowleyana HOM05D007769 ORTHO05D009588 3.6e-17 91.3 75 66.7
Atru.chr13.834 Acer truncatum HOM05D007769 ORTHO05D009588 4.7e-17 90.9 73 67.1
Actinidia08247 Actinidia chinensis HOM05D007769 ORTHO05D009588 4.7e-17 90.9 75 68.0
Glyma.17G234900 Glycine max HOM05D007769 ORTHO05D009588 4.7e-17 90.9 78 67.9
Duzib093G1544 Durio zibethinus HOM05D007769 ORTHO05D009588 1.0e-16 89.7 75 66.7
Actinidia38106 Actinidia chinensis HOM05D007769 ORTHO05D009588 1.8e-16 89.0 75 66.7
Lsat_1_v5_gn_4_131941 Lactuca sativa HOM05D007769 ORTHO05D009588 1.8e-16 89.0 76 67.1
Glyma.14G089015 Glycine max HOM05D007769 ORTHO05D009588 2.3e-16 88.6 78 66.7
Sabra02G0093000 Salix brachista HOM05D007769 ORTHO05D009588 2.3e-16 88.6 70 70.0
Sabra14G0009800 Salix brachista HOM05D007769 ORTHO05D009588 2.3e-16 88.6 70 70.0
CSS0007942 Camellia sinensis var. sinensis HOM05D007769 ORTHO05D009588 3.0e-16 88.2 75 65.3
ECA232G2369 Erigeron canadensis HOM05D007769 ORTHO05D009588 3.0e-16 88.2 76 67.1
Ciclev10003023m.g Citrus clementina HOM05D007769 ORTHO05D009588 4.0e-16 87.8 70 70.0
MELO3C010803.2 Cucumis melo HOM05D007769 ORTHO05D009588 5.2e-16 87.4 78 62.8
HanXRQChr02g0039171 Helianthus annuus HOM05D007769 ORTHO05D009588 5.2e-16 87.4 76 67.1
BcaNung04624 Brassica carinata HOM05D007769 ORTHO05D009588 2.0e-15 85.5 73 64.4
CARHR277820 Cardamine hirsuta HOM05D007769 ORTHO05D009588 2.6e-15 85.1 73 64.4
Aa31LG2G19320 Aethionema arabicum HOM05D007769 ORTHO05D009588 3.4e-15 84.7 73 64.4
Gohir.A05G210200 Gossypium hirsutum HOM05D007769 ORTHO05D009588 1.7e-14 82.4 75 64.0
Nn1g04547 Nelumbo nucifera HOM05D007769 ORTHO05D009588 1.7e-14 82.4 82 63.4
Carub.0008s2472 Capsella rubella HOM05D007769 ORTHO05D009588 2.9e-14 81.6 73 61.6
BcaC04g23346 Brassica carinata HOM05D007769 ORTHO05D009588 6.3e-14 80.5 73 61.6
Sed0002164 Sechium edule HOM05D007769 ORTHO05D009588 1.1e-13 79.7 73 63.0
arahy.Tifrunner.gnm1.ann1.3X0B87 Arachis hypogaea HOM05D007769 ORTHO05D009588 3.2e-13 78.2 74 63.5
EL10Ac1g02381 Beta vulgaris HOM05D007769 ORTHO05D009588 3.2e-13 78.2 78 60.3
CDE04G0481 Ceratophyllum demersum HOM05D007769 ORTHO05D009588 4.1e-13 77.8 74 63.5
arahy.Tifrunner.gnm1.ann1.5K9QCS Arachis hypogaea HOM05D007769 ORTHO05D009588 5.4e-13 77.4 74 63.5
Nn5g30603 Nelumbo nucifera HOM05D007769 ORTHO05D009588 5.4e-13 77.4 83 59.0
Gohir.A01G123201 Gossypium hirsutum HOM05D007769 ORTHO05D009588 9.2e-13 76.6 89 52.8
CsaV3_2G026100 Cucumis sativus L. HOM05D007769 ORTHO05D009588 1.2e-12 76.3 73 60.3
ClCG08G016510 Citrullus lanatus HOM05D007769 ORTHO05D009588 3.5e-12 74.7 73 61.6
AL8G41140 Arabidopsis lyrata HOM05D007769 ORTHO05D009588 4.6e-12 74.3 73 58.9
Migut.C00485 Erythranthe guttata HOM05D007769 ORTHO05D009588 4.6e-12 74.3 75 57.3
SGA_v2.0_scaffold238G43959 Striga asiatica HOM05D007769 ORTHO05D009588 4.6e-12 74.3 70 60.0
A09p08470 Brassica napus HOM05D007769 ORTHO05D009588 7.8e-12 73.6 70 60.0
BraA09t36497Z Brassica rapa HOM05D007769 ORTHO05D009588 7.8e-12 73.6 70 60.0
C09p09600 Brassica napus HOM05D007769 ORTHO05D009588 1.7e-11 72.4 70 60.0
BolC9t53870H Brassica oleracea HOM05D007769 ORTHO05D009588 1.7e-11 72.4 70 60.0
HPP92_006078 Vanilla planifolia HOM05D007769 ORTHO05D009588 2.3e-11 72.0 73 61.6
AT5G63905 Arabidopsis thaliana HOM05D007769 ORTHO05D009588 5.0e-11 70.9 73 54.8
Haze_22434 Corylus avellana HOM05D007769 ORTHO05D009588 8.6e-11 70.1 86 51.2
Thhalv10005134m.g Eutrema salsugineum HOM05D007769 ORTHO05D009588 8.6e-11 70.1 73 56.2
Rhsim07G0219800 Rhododendron simsii HOM05D007769 ORTHO05D009588 8.6e-11 70.1 90 52.2
CANSAT78G2421 Cannabis sativa HOM05D007769 ORTHO05D009588 1.5e-10 69.3 77 54.5
Phvul.001G027800 Phaseolus vulgaris HOM05D007769 ORTHO05D009588 7.3e-10 67.0 80 55.0
Sp2g26970 Schrenkiella parvula HOM05D007769 ORTHO05D009588 7.3e-10 67.0 73 53.4
Lalb_Chr14g0368191 Lupinus albus HOM05D007769 ORTHO05D009588 9.5e-10 66.6 78 51.3
Gorai.002G135600 Gossypium raimondii HOM05D007769 ORTHO05D009588 2.1e-09 65.5 74 55.4
CANSAT25G3084 Cannabis sativa HOM05D007769 ORTHO05D009588 6.2e-09 63.9 77 51.9
Dinv39221 Davidia involucrata HOM05D007769 ORTHO05D009588 5.2e-08 60.8 75 50.7
QL12p038109 Quercus lobata HOM05D007769 ORTHO05D009588 5.2e-08 60.8 100 44.0
FAN27G1659 Fragaria x ananassa HOM05D007769 ORTHO05D009588 8.9e-08 60.1 72 50.0
AagrBONN_evm.TU.Sc2ySwM_344.2823 Anthoceros agrestis HOM05D007769 ORTHO05D009588 2.0e-07 58.9 78 43.6
FAN20G1609 Fragaria x ananassa HOM05D007769 ORTHO05D009588 6.4e-06 53.9 86 43.0
GSVIVG01009342001 Vitis vinifera HOM05D007769 ORTHO05D009588 6.4e-06 53.9 79 48.1


User provided reference genes

Program Settings