Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 2.6e-253 878.2 439 100.0
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 7.7e-234 813.5 439 92.9
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 4.6e-202 708.0 432 81.7
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 8.3e-196 687.2 442 78.3
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 1.6e-194 682.9 441 79.4
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 2.1e-194 682.6 444 80.0
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 8.6e-193 677.2 441 78.0
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 1.1e-192 676.8 432 78.5
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 4.3e-192 674.9 432 79.6
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 1.2e-191 673.3 442 79.0
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 2.1e-186 656.0 433 76.0
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 6.9e-182 641.0 433 74.6
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 4.6e-178 628.2 435 73.6
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 2.5e-168 595.9 449 69.7
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 8.5e-140 501.1 436 57.3
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 1.0e-137 494.2 436 58.3
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 3.0e-137 492.7 429 59.7
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 3.9e-137 492.3 427 58.1
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 3.9e-137 492.3 437 57.9
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 6.7e-137 491.5 433 57.5
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 6.3e-135 485.0 348 66.4
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 1.4e-134 483.8 441 56.9
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 2.0e-133 479.9 429 57.3
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 2.6e-133 479.6 429 57.6
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 1.0e-132 477.6 442 55.9
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 1.3e-132 477.2 430 56.7
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 1.3e-132 477.2 427 56.2
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 1.7e-132 476.9 439 56.3
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 2.9e-132 476.1 442 56.1
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 1.9e-131 473.4 442 55.4
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 2.5e-131 473.0 429 56.9
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 3.2e-131 472.6 430 55.3
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 4.2e-131 472.2 441 54.6
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 5.5e-131 471.9 427 54.6
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 1.2e-130 470.7 429 53.8
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 2.1e-130 469.9 442 55.0
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 3.6e-130 469.2 430 55.8
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 1.0e-129 467.6 423 56.3
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 1.8e-129 466.8 429 55.7
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 3.9e-129 465.7 428 56.8
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 6.7e-129 464.9 432 55.3
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 8.8e-129 464.5 427 53.4
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 8.8e-129 464.5 428 56.8
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 1.1e-128 464.2 429 55.5
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 2.6e-128 463.0 429 57.1
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 9.7e-128 461.1 423 56.0
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 1.3e-127 460.7 432 55.1
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 1.7e-127 460.3 426 53.5
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 2.8e-127 459.5 440 53.0
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 3.7e-127 459.1 444 54.5
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 6.3e-127 458.4 418 57.4
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 1.8e-126 456.8 432 53.9
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 3.1e-126 456.1 436 54.8
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 3.1e-126 456.1 430 54.9
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 4.1e-126 455.7 435 55.4
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 4.1e-126 455.7 432 54.2
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 7.0e-126 454.9 426 56.8
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 1.2e-125 454.1 439 54.0
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 2.0e-125 453.4 430 55.3
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 2.0e-125 453.4 428 56.5
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 2.6e-125 453.0 423 55.1
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.6e-125 453.0 423 55.1
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 4.5e-125 452.2 423 54.4
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 4.5e-125 452.2 426 54.2
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 5.9e-125 451.8 434 53.0
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 7.7e-125 451.4 423 54.4
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 1.7e-124 450.3 427 52.9
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 2.2e-124 449.9 424 54.5
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 2.2e-124 449.9 434 53.7
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 2.2e-124 449.9 436 53.2
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 8.5e-124 448.0 423 55.1
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 1.5e-123 447.2 430 55.1
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 1.9e-123 446.8 442 55.0
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 2.5e-123 446.4 425 54.1
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 2.5e-123 446.4 425 54.1
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 2.5e-123 446.4 425 54.1
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 7.2e-123 444.9 429 53.6
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 1.2e-122 444.1 423 54.1
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 1.2e-122 444.1 424 54.0
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 1.2e-122 444.1 423 54.1
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 1.2e-122 444.1 423 54.1
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 1.2e-122 444.1 403 56.3
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 1.6e-122 443.7 429 54.1
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 2.1e-122 443.4 423 54.1
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 2.1e-122 443.4 427 53.2
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 2.7e-122 443.0 375 59.5
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 3.6e-122 442.6 431 53.6
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 3.6e-122 442.6 429 53.4
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 8.0e-122 441.4 431 53.4
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 8.0e-122 441.4 339 60.8
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 2.3e-121 439.9 374 58.3
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 4.0e-121 439.1 423 53.2
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 4.0e-121 439.1 346 59.5
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 5.2e-121 438.7 423 53.2
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 8.8e-121 438.0 345 58.8
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 8.8e-121 438.0 385 56.4
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 8.8e-121 438.0 428 51.6
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 1.5e-120 437.2 427 53.2
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 1.5e-120 437.2 430 53.5
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 2.0e-120 436.8 342 59.1
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 2.6e-120 436.4 349 59.9
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 2.6e-120 436.4 427 53.9
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 9.7e-120 434.5 428 51.6
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 9.7e-120 434.5 426 52.1
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 1.3e-119 434.1 427 53.2
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.7e-119 433.7 432 52.1
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 2.8e-119 433.0 428 54.0
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 1.4e-118 430.6 339 59.0
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.8e-118 430.3 429 52.9
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 1.8e-118 430.3 421 51.8
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 3.1e-118 429.5 430 53.0
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 4.1e-118 429.1 431 52.2
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 1.2e-117 427.6 435 52.0
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 2.7e-117 426.4 349 58.7
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 1.3e-116 424.1 427 52.5
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 3.8e-116 422.5 431 51.7
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 5.0e-116 422.2 401 52.9
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 6.5e-116 421.8 427 50.1
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 1.9e-115 420.2 373 57.1
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 2.5e-115 419.9 342 58.5
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 7.2e-115 418.3 404 54.0
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 2.1e-114 416.8 430 52.3
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 2.1e-114 416.8 457 49.7
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 2.3e-113 413.3 365 54.8
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 3.0e-113 412.9 401 53.4
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 4.0e-113 412.5 421 51.8
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 6.3e-111 405.2 417 51.1
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 4.1e-110 402.5 431 49.4
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 7.0e-110 401.7 330 56.4
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.7e-109 399.8 430 48.8
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 1.7e-108 397.1 333 58.9
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 3.8e-108 396.0 347 55.9
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 8.6e-108 394.8 444 48.6
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 2.1e-106 390.2 449 48.1
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 1.0e-105 387.9 365 52.9
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 7.5e-104 381.7 288 59.0
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 4.9e-103 379.0 381 49.1
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 1.6e-101 374.0 340 50.9
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.6e-101 374.0 417 48.0
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 4.3e-99 365.9 417 47.5
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 9.5e-99 364.8 381 50.7
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 3.4e-96 356.3 254 65.0
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 7.5e-96 355.1 339 49.3
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 1.3e-95 354.4 339 49.6
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 6.2e-90 335.5 339 47.5
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 8.0e-90 335.1 430 44.7
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.1e-89 333.2 402 43.3
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 7.5e-88 328.6 342 46.8
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 7.5e-88 328.6 449 40.1
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 3.2e-86 323.2 247 58.3
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.3e-84 317.8 339 46.0
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 5.6e-83 312.4 344 45.3
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 2.1e-82 310.5 299 52.2
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 2.6e-80 303.5 237 58.6
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 3.2e-78 296.6 284 56.7
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 3.5e-77 293.1 349 43.3
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 1.6e-74 284.3 237 56.1
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 3.1e-73 280.0 237 52.7
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 3.1e-73 280.0 383 41.3
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.2e-72 278.1 346 42.5
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 9.9e-72 275.0 347 40.6
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.8e-71 273.1 346 40.2
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 6.4e-71 272.3 237 53.2
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.4e-70 271.2 348 39.7
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.2e-69 268.1 346 39.6
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 7.8e-69 265.4 299 43.8
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 2.4e-65 253.8 240 48.8
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.0e-64 250.8 348 37.1
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.6e-64 250.4 399 37.6
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 3.5e-53 213.4 368 34.2
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 3.0e-36 157.1 150 52.0
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 8.7e-36 155.6 483 28.2
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 6.1e-29 132.9 154 46.8
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 8.8e-20 102.4 103 44.7
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 5.0e-15 86.7 87 43.7
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 6.5e-15 86.3 119 37.0
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 5.5e-14 83.2 138 45.7
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 6.1e-13 79.7 89 39.3
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.4e-12 78.6 88 46.6
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 2.2e-10 71.2 75 41.3
Nn1g01454 Nelumbo nucifera HOM05D003764 ORTHO05D004356 5.5e-06 56.6 42 69.0


User provided reference genes

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