Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G0552 Papaver somniferum HOM05D003948 ORTHO05D004610 3.3e-161 571.6 287 100.0
TAR625G1371 Trochodendron aralioides HOM05D003948 ORTHO05D004610 1.3e-80 303.9 290 55.2
Nn8g39388 Nelumbo nucifera HOM05D003948 ORTHO05D004610 1.1e-76 290.8 290 54.5
MBI04_g24205_MAGBIO Magnolia biondii HOM05D003948 ORTHO05D004610 1.3e-75 287.3 246 59.8
Hma1.2p1_0317F.1_g123650 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 1.0e-72 277.7 282 53.5
COL.COLO4_05762 Corchorus olitorius HOM05D003948 ORTHO05D004610 1.3e-72 277.3 257 56.4
Dinv30573 Davidia involucrata HOM05D003948 ORTHO05D004610 1.3e-72 277.3 278 54.0
Cpa.g.sc10.224 Carica papaya HOM05D003948 ORTHO05D004610 3.2e-71 272.7 242 57.9
Cfa002007 Carpinus fangiana HOM05D003948 ORTHO05D004610 3.2e-71 272.7 277 53.1
Aqoxy7G02097 Aquilegia oxysepala HOM05D003948 ORTHO05D004610 1.2e-70 270.8 278 53.6
Actinidia01766 Actinidia chinensis HOM05D003948 ORTHO05D004610 1.6e-70 270.4 289 52.2
CiPaw.01G244700 Carya illinoinensis HOM05D003948 ORTHO05D004610 2.7e-70 269.6 277 52.3
PGR031G2458 Punica granatum HOM05D003948 ORTHO05D004610 1.3e-69 267.3 291 51.9
Actinidia15794 Actinidia chinensis HOM05D003948 ORTHO05D004610 1.8e-69 266.9 282 52.1
vmacro18966 Vaccinium macrocarpon HOM05D003948 ORTHO05D004610 1.8e-69 266.9 269 54.3
ClCG07G012790 Citrullus lanatus HOM05D003948 ORTHO05D004610 3.0e-69 266.2 249 57.4
COL.COLO4_12905 Corchorus olitorius HOM05D003948 ORTHO05D004610 3.0e-69 266.2 246 56.5
Potri.003G061800 Populus trichocarpa HOM05D003948 ORTHO05D004610 3.0e-69 266.2 288 49.3
CSS0012666 Camellia sinensis var. sinensis HOM05D003948 ORTHO05D004610 5.1e-69 265.4 275 49.5
Manes.11G053200 Manihot esculenta HOM05D003948 ORTHO05D004610 5.1e-69 265.4 288 49.0
Haze_16515 Corylus avellana HOM05D003948 ORTHO05D004610 8.7e-69 264.6 277 51.3
Thecc.06G071300 Theobroma cacao HOM05D003948 ORTHO05D004610 1.1e-68 264.2 287 50.5
Dinv36546 Davidia involucrata HOM05D003948 ORTHO05D004610 1.5e-68 263.8 291 50.2
Ciclev10026043m.g Citrus clementina HOM05D003948 ORTHO05D004610 2.5e-68 263.1 278 52.5
Thecc.09G123100 Theobroma cacao HOM05D003948 ORTHO05D004610 2.5e-68 263.1 258 55.8
Actinidia22003 Actinidia chinensis HOM05D003948 ORTHO05D004610 5.7e-68 261.9 241 56.4
Sabra03G0035900 Salix brachista HOM05D003948 ORTHO05D004610 5.7e-68 261.9 288 48.3
ATR1156G038 Amborella trichopoda HOM05D003948 ORTHO05D004610 1.6e-67 260.4 271 52.8
Actinidia40456 Actinidia chinensis HOM05D003948 ORTHO05D004610 2.8e-67 259.6 255 54.1
CsaV3_4G001410 Cucumis sativus L. HOM05D003948 ORTHO05D004610 4.8e-67 258.8 248 56.0
Duzib168G1107 Durio zibethinus HOM05D003948 ORTHO05D004610 4.8e-67 258.8 285 49.5
Manes.14G130600 Manihot esculenta HOM05D003948 ORTHO05D004610 4.8e-67 258.8 242 55.0
Ciclev10008863m.g Citrus clementina HOM05D003948 ORTHO05D004610 1.1e-66 257.7 250 53.6
Gohir.A10G076166 Gossypium hirsutum HOM05D003948 ORTHO05D004610 1.4e-66 257.3 259 52.9
MELO3C017899.2 Cucumis melo HOM05D003948 ORTHO05D004610 1.8e-66 256.9 248 55.6
TWI34G1010 Tripterygium wilfordii HOM05D003948 ORTHO05D004610 1.8e-66 256.9 287 50.2
Sopen03g035350 Solanum pennellii HOM05D003948 ORTHO05D004610 2.4e-66 256.5 278 50.0
Rhsim08G0216000 Rhododendron simsii HOM05D003948 ORTHO05D004610 3.1e-66 256.1 270 52.2
TPR.G37189 Trifolium pratense HOM05D003948 ORTHO05D004610 3.1e-66 256.1 253 53.4
CANSAT56G2529 Cannabis sativa HOM05D003948 ORTHO05D004610 4.1e-66 255.8 283 50.5
Gorai.011G081300 Gossypium raimondii HOM05D003948 ORTHO05D004610 4.1e-66 255.8 248 53.6
GSVIVG01017270001 Vitis vinifera HOM05D003948 ORTHO05D004610 5.3e-66 255.4 209 61.2
Sed0014623 Sechium edule HOM05D003948 ORTHO05D004610 1.2e-65 254.2 241 55.2
MD17G1205400 Malus domestica HOM05D003948 ORTHO05D004610 1.5e-65 253.8 243 55.6
Nitab4.5_0006574g0020 Nicotiana tabacum HOM05D003948 ORTHO05D004610 1.5e-65 253.8 278 50.4
Solyc03g116460.4 Solanum lycopersicum HOM05D003948 ORTHO05D004610 2.0e-65 253.4 284 49.3
QL02p087786 Quercus lobata HOM05D003948 ORTHO05D004610 2.6e-65 253.1 276 50.4
Eucgr.J03052 Eucalyptus grandis HOM05D003948 ORTHO05D004610 4.5e-65 252.3 279 49.8
Nitab4.5_0002257g0010 Nicotiana tabacum HOM05D003948 ORTHO05D004610 5.9e-65 251.9 264 52.7
RcHm_v2.0_Chr2g0136511 Rosa chinensis HOM05D003948 ORTHO05D004610 5.9e-65 251.9 240 58.3
Psat5g301000 Pisum sativum HOM05D003948 ORTHO05D004610 7.7e-65 251.5 199 60.3
Medtr2g103300 Medicago truncatula HOM05D003948 ORTHO05D004610 1.0e-64 251.1 249 52.6
PGSC0003DMG402000630 Solanum tuberosum HOM05D003948 ORTHO05D004610 1.0e-64 251.1 278 50.4
Gohir.A07G034800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 1.3e-64 250.8 287 49.1
CAN.G407.106 Capsicum annuum HOM05D003948 ORTHO05D004610 1.7e-64 250.4 244 53.3
MD17G1205900 Malus domestica HOM05D003948 ORTHO05D004610 1.7e-64 250.4 244 54.9
CiPaw.03G241800 Carya illinoinensis HOM05D003948 ORTHO05D004610 2.2e-64 250.0 247 53.4
Duzib187G0771 Durio zibethinus HOM05D003948 ORTHO05D004610 2.2e-64 250.0 246 54.9
DCAR_025486 Daucus carota HOM05D003948 ORTHO05D004610 5.0e-64 248.8 239 54.8
FAN02G3756 Fragaria x ananassa HOM05D003948 ORTHO05D004610 6.5e-64 248.4 248 56.0
Lalb_Chr22g0351001 Lupinus albus HOM05D003948 ORTHO05D004610 8.5e-64 248.1 284 48.2
Gorai.009G130200 Gossypium raimondii HOM05D003948 ORTHO05D004610 1.1e-63 247.7 246 52.8
AUR62011555 Chenopodium quinoa HOM05D003948 ORTHO05D004610 1.4e-63 247.3 291 47.4
Gohir.A05G125200 Gossypium hirsutum HOM05D003948 ORTHO05D004610 1.4e-63 247.3 246 52.8
Gohir.D05G126200 Gossypium hirsutum HOM05D003948 ORTHO05D004610 1.4e-63 247.3 246 52.8
Ah.01g011210 Amaranthus hybridus HOM05D003948 ORTHO05D004610 1.9e-63 246.9 291 48.5
Ca_01082_v3 Cicer arietinum L. HOM05D003948 ORTHO05D004610 1.9e-63 246.9 256 52.3
FAN05G4627 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.9e-63 246.9 276 52.2
Dinv41531 Davidia involucrata HOM05D003948 ORTHO05D004610 2.5e-63 246.5 228 54.4
Rhsim01G0076600 Rhododendron simsii HOM05D003948 ORTHO05D004610 2.5e-63 246.5 242 55.0
Gorai.001G040900 Gossypium raimondii HOM05D003948 ORTHO05D004610 3.2e-63 246.1 287 48.1
Gohir.D07G038800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 4.2e-63 245.7 287 48.4
Atru.chr7.1198 Acer truncatum HOM05D003948 ORTHO05D004610 7.2e-63 245.0 248 53.2
Cpa.g.sc648.2 Carica papaya HOM05D003948 ORTHO05D004610 9.4e-63 244.6 248 51.6
Peaxi162Scf00274g00859 Petunia axillaris HOM05D003948 ORTHO05D004610 1.2e-62 244.2 242 52.5
CSS0016874 Camellia sinensis var. sinensis HOM05D003948 ORTHO05D004610 1.6e-62 243.8 277 49.1
FAN14G0295 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.6e-62 243.8 248 55.2
VMungo1080G0933 Vigna mungo HOM05D003948 ORTHO05D004610 1.6e-62 243.8 245 53.1
AUR62016374 Chenopodium quinoa HOM05D003948 ORTHO05D004610 6.1e-62 241.9 291 46.4
Gorai.009G019200 Gossypium raimondii HOM05D003948 ORTHO05D004610 6.1e-62 241.9 255 53.7
Gohir.D05G018800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 7.9e-62 241.5 255 53.7
Prupe.7G239700 Prunus persica HOM05D003948 ORTHO05D004610 7.9e-62 241.5 246 53.7
Cc06_g08780 Coffea canephora HOM05D003948 ORTHO05D004610 1.0e-61 241.1 269 49.1
PGR142G4293 Punica granatum HOM05D003948 ORTHO05D004610 1.0e-61 241.1 262 48.1
vmacro20597 Vaccinium macrocarpon HOM05D003948 ORTHO05D004610 1.0e-61 241.1 287 47.0
Eucgr.C01133 Eucalyptus grandis HOM05D003948 ORTHO05D004610 2.3e-61 240.0 240 52.1
Prupe.3G081000 Prunus persica HOM05D003948 ORTHO05D004610 2.3e-61 240.0 203 58.1
AT1G15410 Arabidopsis thaliana HOM05D003948 ORTHO05D004610 3.0e-61 239.6 278 45.3
BolC5t30094H Brassica oleracea HOM05D003948 ORTHO05D004610 3.0e-61 239.6 275 46.9
Glyma.13G363700 Glycine max HOM05D003948 ORTHO05D004610 5.1e-61 238.8 207 57.0
Lj3g0025185 Lotus japonicus HOM05D003948 ORTHO05D004610 5.1e-61 238.8 248 52.8
Sp1g13770 Schrenkiella parvula HOM05D003948 ORTHO05D004610 6.7e-61 238.4 275 45.8
Gohir.A05G017900 Gossypium hirsutum HOM05D003948 ORTHO05D004610 8.8e-61 238.0 244 53.7
Hma1.2p1_0018F.1_g012660 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 8.8e-61 238.0 270 50.7
Carub.0001s1520 Capsella rubella HOM05D003948 ORTHO05D004610 1.1e-60 237.7 278 45.3
Cc04_g04060 Coffea canephora HOM05D003948 ORTHO05D004610 1.1e-60 237.7 281 47.3
Rhsim01G0076700 Rhododendron simsii HOM05D003948 ORTHO05D004610 1.1e-60 237.7 237 53.6
THA.LOC104813569 Tarenaya hassleriana HOM05D003948 ORTHO05D004610 1.1e-60 237.7 246 51.2
C05p13580 Brassica napus HOM05D003948 ORTHO05D004610 1.5e-60 237.3 275 46.9
Lj4g0000861 Lotus japonicus HOM05D003948 ORTHO05D004610 1.5e-60 237.3 268 50.0
AL1G27520 Arabidopsis lyrata HOM05D003948 ORTHO05D004610 4.3e-60 235.7 251 48.2
A06p11460 Brassica napus HOM05D003948 ORTHO05D004610 4.3e-60 235.7 275 46.2
BraA06t24323Z Brassica rapa HOM05D003948 ORTHO05D004610 4.3e-60 235.7 275 46.2
Thhalv10008186m.g Eutrema salsugineum HOM05D003948 ORTHO05D004610 4.3e-60 235.7 278 44.6
Lj3g0004615 Lotus japonicus HOM05D003948 ORTHO05D004610 4.3e-60 235.7 258 51.6
Sed0015734 Sechium edule HOM05D003948 ORTHO05D004610 4.3e-60 235.7 239 49.0
EL10Ac9g21937 Beta vulgaris HOM05D003948 ORTHO05D004610 7.4e-60 235.0 291 46.0
Duzib235G1097 Durio zibethinus HOM05D003948 ORTHO05D004610 1.7e-59 233.8 227 54.6
Glyma.15G010100 Glycine max HOM05D003948 ORTHO05D004610 1.7e-59 233.8 282 45.0
arahy.Tifrunner.gnm1.ann1.37ZKFY Arachis hypogaea HOM05D003948 ORTHO05D004610 2.8e-59 233.0 245 51.4
arahy.Tifrunner.gnm1.ann1.U8XBHX Arachis hypogaea HOM05D003948 ORTHO05D004610 2.8e-59 233.0 245 51.4
MSTRG.11117 Avicennia marina HOM05D003948 ORTHO05D004610 2.8e-59 233.0 251 50.2
Hund06577 Selenicereus undatus HOM05D003948 ORTHO05D004610 2.8e-59 233.0 291 44.7
CANSAT11G2309 Cannabis sativa HOM05D003948 ORTHO05D004610 1.4e-58 230.7 250 52.4
Phvul.003G162800 Phaseolus vulgaris HOM05D003948 ORTHO05D004610 1.4e-58 230.7 269 50.6
BcaC05g25483 Brassica carinata HOM05D003948 ORTHO05D004610 2.4e-58 229.9 249 48.2
Hma1.2p1_0018F.1_g012640 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 5.3e-58 228.8 293 46.8
SalBow2G2418 Salvia bowleyana HOM05D003948 ORTHO05D004610 1.5e-57 227.3 260 47.7
Medtr4g114000 Medicago truncatula HOM05D003948 ORTHO05D004610 2.0e-57 226.9 250 51.2
Lsat_1_v5_gn_4_105880 Lactuca sativa HOM05D003948 ORTHO05D004610 2.6e-57 226.5 199 56.8
VMungo1215G2012 Vigna mungo HOM05D003948 ORTHO05D004610 3.4e-57 226.1 269 49.4
TPR.G10716 Trifolium pratense HOM05D003948 ORTHO05D004610 5.9e-57 225.3 237 53.6
arahy.Tifrunner.gnm1.ann1.T1A9DJ Arachis hypogaea HOM05D003948 ORTHO05D004610 1.0e-56 224.6 286 45.5
arahy.Tifrunner.gnm1.ann1.VXE6AC Arachis hypogaea HOM05D003948 ORTHO05D004610 1.0e-56 224.6 265 48.3
ClCG06G010930 Citrullus lanatus HOM05D003948 ORTHO05D004610 2.2e-56 223.4 242 46.7
Glyma.17G116500 Glycine max HOM05D003948 ORTHO05D004610 2.2e-56 223.4 210 56.7
CDE02G2452 Ceratophyllum demersum HOM05D003948 ORTHO05D004610 2.9e-56 223.0 242 48.3
Glyma.05G008200 Glycine max HOM05D003948 ORTHO05D004610 2.9e-56 223.0 231 53.2
RcHm_v2.0_Chr2g0089121 Rosa chinensis HOM05D003948 ORTHO05D004610 2.9e-56 223.0 276 46.7
MELO3C026644.2 Cucumis melo HOM05D003948 ORTHO05D004610 5.0e-56 222.2 248 46.8
DCAR_014870 Daucus carota HOM05D003948 ORTHO05D004610 1.4e-55 220.7 197 54.8
FAN28G1194 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.9e-55 220.3 246 48.8
Lj7A632T42 Lonicera japonica HOM05D003948 ORTHO05D004610 2.5e-55 219.9 229 50.2
Psat4g040400 Pisum sativum HOM05D003948 ORTHO05D004610 2.5e-55 219.9 274 46.0
FvH4_1g03590 Fragaria vesca HOM05D003948 ORTHO05D004610 3.2e-55 219.5 277 46.2
FAN23G0975 Fragaria x ananassa HOM05D003948 ORTHO05D004610 7.2e-55 218.4 265 48.3
EL10Ac8g18617 Beta vulgaris HOM05D003948 ORTHO05D004610 9.4e-55 218.0 270 46.7
AUR62033477 Chenopodium quinoa HOM05D003948 ORTHO05D004610 9.4e-55 218.0 260 45.8
FAN19G2000 Fragaria x ananassa HOM05D003948 ORTHO05D004610 9.4e-55 218.0 277 45.8
Ah.09g225870 Amaranthus hybridus HOM05D003948 ORTHO05D004610 1.2e-54 217.6 199 53.3
Migut.D01056 Erythranthe guttata HOM05D003948 ORTHO05D004610 1.2e-54 217.6 247 49.0
Ca_21696_v3 Cicer arietinum L. HOM05D003948 ORTHO05D004610 2.1e-54 216.9 244 49.2
SEGI_16675 Sequoiadendron giganteum HOM05D003948 ORTHO05D004610 2.7e-54 216.5 234 50.9
Zm00001eb342320 Zea mays HOM05D003948 ORTHO05D004610 2.7e-54 216.5 255 45.1
AUR62011090 Chenopodium quinoa HOM05D003948 ORTHO05D004610 7.9e-54 214.9 233 49.4
Nn2g11965 Nelumbo nucifera HOM05D003948 ORTHO05D004610 2.3e-53 213.4 204 53.9
FAN26G0686 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.7e-51 207.2 298 43.0
Os01g0555200 Oryza sativa ssp. japonica HOM05D003948 ORTHO05D004610 2.8e-51 206.5 259 43.6
Haze_25613 Corylus avellana HOM05D003948 ORTHO05D004610 3.1e-50 203.0 244 45.9
SGA_v2.0_scaffold5G02657 Striga asiatica HOM05D003948 ORTHO05D004610 9.1e-50 201.4 207 49.8
MD02G1035500 Malus domestica HOM05D003948 ORTHO05D004610 3.0e-45 186.4 210 50.0
SalBow2G0819 Salvia bowleyana HOM05D003948 ORTHO05D004610 5.2e-45 185.7 212 45.3
Sabra01G0139400 Salix brachista HOM05D003948 ORTHO05D004610 1.7e-43 180.6 276 40.6
CARHR015960 Cardamine hirsuta HOM05D003948 ORTHO05D004610 5.3e-42 175.6 233 41.6
FvH4_6g30270 Fragaria vesca HOM05D003948 ORTHO05D004610 7.0e-42 175.3 204 50.5
Mapoly0023s0100 Marchantia polymorpha HOM05D003948 ORTHO05D004610 3.8e-40 169.5 139 54.0
ECA232G2488 Erigeron canadensis HOM05D003948 ORTHO05D004610 8.0e-38 161.8 113 66.4
AUR62011108 Chenopodium quinoa HOM05D003948 ORTHO05D004610 4.0e-37 159.5 221 43.0
GSVIVG01015502001 Vitis vinifera HOM05D003948 ORTHO05D004610 2.6e-36 156.8 113 61.9
Dinv38099 Davidia involucrata HOM05D003948 ORTHO05D004610 1.1e-34 151.4 268 39.9
Sc18g0000700 Simmondsia chinensis HOM05D003948 ORTHO05D004610 3.5e-33 146.4 222 40.1
Rhsim03G0104000 Rhododendron simsii HOM05D003948 ORTHO05D004610 2.5e-31 140.2 113 58.4
Atru.chr1.3072 Acer truncatum HOM05D003948 ORTHO05D004610 5.5e-31 139.0 219 39.7
Phvul.005G175301 Phaseolus vulgaris HOM05D003948 ORTHO05D004610 1.6e-30 137.5 172 44.2
SMO271G0179 Selaginella moellendorffii HOM05D003948 ORTHO05D004610 2.0e-28 130.6 213 36.6
Gohir.D10G075401 Gossypium hirsutum HOM05D003948 ORTHO05D004610 7.5e-28 128.6 105 61.0
DCAR_000573 Daucus carota HOM05D003948 ORTHO05D004610 5.9e-17 92.4 77 54.5
Psat0s806g0040 Pisum sativum HOM05D003948 ORTHO05D004610 9.5e-15 85.1 117 41.0
Lj5A69T36 Lonicera japonica HOM05D003948 ORTHO05D004610 4.7e-14 82.8 64 64.1
ClCG09G013940 Citrullus lanatus HOM05D003948 ORTHO05D004610 3.4e-12 76.6 56 62.5
CARHR015950 Cardamine hirsuta HOM05D003948 ORTHO05D004610 1.1e-10 71.6 45 71.1
Lj1g0003343 Lotus japonicus HOM05D003948 ORTHO05D004610 1.0e-08 65.1 44 70.5


User provided reference genes

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