Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO135G1025 Papaver somniferum HOM05D007869 ORTHO05D009962 6.8e-193 677.2 348 100.0
PSO384G3553 Papaver somniferum HOM05D007869 ORTHO05D009962 1.8e-172 609.4 329 93.9
TAR374G1227 Trochodendron aralioides HOM05D007869 ORTHO05D009962 1.8e-76 290.4 314 51.3
Atru.chr5.803 Acer truncatum HOM05D007869 ORTHO05D009962 2.3e-71 273.5 327 48.3
Nn3g18755 Nelumbo nucifera HOM05D007869 ORTHO05D009962 6.6e-71 271.9 312 52.2
Sabra02G0132700 Salix brachista HOM05D007869 ORTHO05D009962 4.3e-70 269.2 326 48.5
Haze_15765 Corylus avellana HOM05D007869 ORTHO05D009962 7.3e-70 268.5 326 46.9
CiPaw.02G045900 Carya illinoinensis HOM05D007869 ORTHO05D009962 3.6e-69 266.2 326 47.9
Cfa003717 Carpinus fangiana HOM05D007869 ORTHO05D009962 9.0e-68 261.5 326 46.6
Ciclev10021277m.g Citrus clementina HOM05D007869 ORTHO05D009962 9.0e-68 261.5 327 46.5
Sabra14G0079800 Salix brachista HOM05D007869 ORTHO05D009962 4.9e-66 255.8 326 45.7
Manes.05G005500 Manihot esculenta HOM05D007869 ORTHO05D009962 8.4e-66 255.0 312 46.5
Glyma.09G283900 Glycine max HOM05D007869 ORTHO05D009962 1.9e-65 253.8 326 47.5
Lalb_Chr17g0337801 Lupinus albus HOM05D007869 ORTHO05D009962 1.9e-65 253.8 327 46.8
Lalb_Chr04g0258981 Lupinus albus HOM05D007869 ORTHO05D009962 2.4e-65 253.4 327 45.6
Prupe.2G203300 Prunus persica HOM05D007869 ORTHO05D009962 7.1e-65 251.9 327 46.2
TWI14G0946 Tripterygium wilfordii HOM05D007869 ORTHO05D009962 9.3e-65 251.5 313 47.6
Glyma.20G001800 Glycine max HOM05D007869 ORTHO05D009962 1.2e-64 251.1 326 46.6
RcHm_v2.0_Chr1g0361741 Rosa chinensis HOM05D007869 ORTHO05D009962 1.2e-64 251.1 325 45.5
Potri.014G108300 Populus trichocarpa HOM05D007869 ORTHO05D009962 1.6e-64 250.8 326 44.2
Duzib138G0629 Durio zibethinus HOM05D007869 ORTHO05D009962 2.1e-64 250.4 328 47.3
TPR.G29782 Trifolium pratense HOM05D007869 ORTHO05D009962 2.1e-64 250.4 327 45.3
Psat6g099760 Pisum sativum HOM05D007869 ORTHO05D009962 3.5e-64 249.6 314 45.5
Thecc.01G330400 Theobroma cacao HOM05D007869 ORTHO05D009962 3.5e-64 249.6 313 47.0
Lj2g0022280 Lotus japonicus HOM05D007869 ORTHO05D009962 7.9e-64 248.4 327 43.7
COL.COLO4_23074 Corchorus olitorius HOM05D007869 ORTHO05D009962 2.3e-63 246.9 313 46.0
CANSAT56G0171 Cannabis sativa HOM05D007869 ORTHO05D009962 6.6e-63 245.4 313 45.0
Phvul.003G003700 Phaseolus vulgaris HOM05D007869 ORTHO05D009962 8.7e-63 245.0 326 44.8
VMungo0251G2255 Vigna mungo HOM05D007869 ORTHO05D009962 5.6e-62 242.3 326 44.8
BolC5t28887H Brassica oleracea HOM05D007869 ORTHO05D009962 9.6e-62 241.5 307 43.6
C05p01060 Brassica napus HOM05D007869 ORTHO05D009962 1.3e-61 241.1 307 44.0
BraA10t42381Z Brassica rapa HOM05D007869 ORTHO05D009962 6.2e-61 238.8 308 44.2
FAN06G2096 Fragaria x ananassa HOM05D007869 ORTHO05D009962 6.2e-61 238.8 325 43.7
Thhalv10009953m.g Eutrema salsugineum HOM05D007869 ORTHO05D009962 8.1e-61 238.4 306 44.8
FAN10G0101 Fragaria x ananassa HOM05D007869 ORTHO05D009962 8.1e-61 238.4 325 43.7
Medtr1g038260 Medicago truncatula HOM05D007869 ORTHO05D009962 8.1e-61 238.4 327 44.3
A10p01030 Brassica napus HOM05D007869 ORTHO05D009962 1.1e-60 238.0 308 44.2
THA.LOC104825914 Tarenaya hassleriana HOM05D007869 ORTHO05D009962 5.3e-60 235.7 313 42.5
FAN06G3475 Fragaria x ananassa HOM05D007869 ORTHO05D009962 6.9e-60 235.3 325 43.4
Actinidia28076 Actinidia chinensis HOM05D007869 ORTHO05D009962 1.5e-59 234.2 251 49.8
Sp1g01350 Schrenkiella parvula HOM05D007869 ORTHO05D009962 2.0e-59 233.8 310 43.9
FAN03G1443 Fragaria x ananassa HOM05D007869 ORTHO05D009962 2.6e-59 233.4 325 43.4
FAN03G2169 Fragaria x ananassa HOM05D007869 ORTHO05D009962 2.6e-59 233.4 325 43.4
Sc01g0002100 Simmondsia chinensis HOM05D007869 ORTHO05D009962 7.6e-59 231.9 308 43.2
BcaC05g24607 Brassica carinata HOM05D007869 ORTHO05D009962 1.7e-58 230.7 307 43.3
FAN01G2503 Fragaria x ananassa HOM05D007869 ORTHO05D009962 6.4e-58 228.8 259 48.3
CARHR001570 Cardamine hirsuta HOM05D007869 ORTHO05D009962 8.4e-58 228.4 307 42.3
FAN10G1242 Fragaria x ananassa HOM05D007869 ORTHO05D009962 8.4e-58 228.4 259 47.9
arahy.Tifrunner.gnm1.ann1.WBP5Q2 Arachis hypogaea HOM05D007869 ORTHO05D009962 1.9e-57 227.3 307 43.3
CsaV3_6G008420 Cucumis sativus L. HOM05D007869 ORTHO05D009962 3.2e-57 226.5 311 43.1
CSS0017560 Camellia sinensis var. sinensis HOM05D007869 ORTHO05D009962 4.2e-57 226.1 273 48.7
Cpa.g.sc57.67 Carica papaya HOM05D007869 ORTHO05D009962 5.5e-57 225.7 313 42.5
MBI04_g38990_MAGBIO Magnolia biondii HOM05D007869 ORTHO05D009962 5.5e-57 225.7 315 44.4
Carub.0001s0129 Capsella rubella HOM05D007869 ORTHO05D009962 7.1e-57 225.3 307 45.9
Aa31LG1G10230 Aethionema arabicum HOM05D007869 ORTHO05D009962 3.5e-56 223.0 320 45.3
arahy.Tifrunner.gnm1.ann1.2P25JP Arachis hypogaea HOM05D007869 ORTHO05D009962 6.7e-55 218.8 309 42.7
Ah.05g178800 Amaranthus hybridus HOM05D007869 ORTHO05D009962 2.5e-54 216.9 311 43.7
EL10Ac1g00161 Beta vulgaris HOM05D007869 ORTHO05D009962 2.5e-54 216.9 311 43.1
ClCG06G002380 Citrullus lanatus HOM05D007869 ORTHO05D009962 5.6e-54 215.7 311 42.8
Os10g0200700 Oryza sativa ssp. japonica HOM05D007869 ORTHO05D009962 2.4e-52 210.3 306 41.2
AL4G39680 Arabidopsis lyrata HOM05D007869 ORTHO05D009962 3.1e-52 209.9 310 44.5
Zm00001eb010960 Zea mays HOM05D007869 ORTHO05D009962 4.0e-52 209.5 306 41.8
AT2G41610 Arabidopsis thaliana HOM05D007869 ORTHO05D009962 6.9e-52 208.8 307 43.3
HPP92_007374 Vanilla planifolia HOM05D007869 ORTHO05D009962 6.9e-52 208.8 351 39.3
Sed0016589 Sechium edule HOM05D007869 ORTHO05D009962 9.0e-52 208.4 309 42.7
Zm00001eb398460 Zea mays HOM05D007869 ORTHO05D009962 2.0e-51 207.2 306 40.8
Os03g0253600 Oryza sativa ssp. japonica HOM05D007869 ORTHO05D009962 7.6e-51 205.3 308 41.2
AUR62004577 Chenopodium quinoa HOM05D007869 ORTHO05D009962 1.1e-49 201.4 311 40.2
ATR0579G134 Amborella trichopoda HOM05D007869 ORTHO05D009962 1.4e-49 201.1 314 40.8
AUR62023523 Chenopodium quinoa HOM05D007869 ORTHO05D009962 4.2e-49 199.5 311 40.5
Lju170C22T1 Lonicera japonica HOM05D007869 ORTHO05D009962 1.6e-48 197.6 237 46.4
MELO3C022297.2 Cucumis melo HOM05D007869 ORTHO05D009962 1.8e-47 194.1 311 38.9
FvH4_7g18090 Fragaria vesca HOM05D007869 ORTHO05D009962 2.1e-45 187.2 228 48.2
MBI04_g27772_MAGBIO Magnolia biondii HOM05D007869 ORTHO05D009962 3.1e-44 183.3 262 44.3
FvH4_7g18120 Fragaria vesca HOM05D007869 ORTHO05D009962 2.5e-41 173.7 159 57.2
Medtr1g038290 Medicago truncatula HOM05D007869 ORTHO05D009962 5.5e-41 172.6 328 36.9
Rhsim01G0181500 Rhododendron simsii HOM05D007869 ORTHO05D009962 7.2e-41 172.2 213 45.1
Gohir.D08G144000 Gossypium hirsutum HOM05D007869 ORTHO05D009962 3.0e-39 166.8 214 45.8
Gorai.004G148700 Gossypium raimondii HOM05D007869 ORTHO05D009962 3.9e-39 166.4 214 45.8
Gohir.A08G122700 Gossypium hirsutum HOM05D007869 ORTHO05D009962 5.1e-39 166.0 214 45.8
Dinv32655 Davidia involucrata HOM05D007869 ORTHO05D009962 1.5e-27 127.9 160 44.4
Duzib133G0538 Durio zibethinus HOM05D007869 ORTHO05D009962 5.2e-07 59.7 47 51.1
SEGI_25376 Sequoiadendron giganteum HOM05D007869 ORTHO05D009962 6.8e-07 59.3 135 34.1


User provided reference genes

Program Settings