Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO135G0656 Papaver somniferum HOM05D005133 ORTHO05D006685 4.5e-231 804.3 420 100.0
TAR375G0148 Trochodendron aralioides HOM05D005133 ORTHO05D006685 7.4e-133 478.0 408 63.7
Atru.chr5.593 Acer truncatum HOM05D005133 ORTHO05D006685 2.0e-130 469.9 411 61.3
Dinv43872 Davidia involucrata HOM05D005133 ORTHO05D006685 9.9e-130 467.6 411 61.6
Dinv32531 Davidia involucrata HOM05D005133 ORTHO05D006685 1.4e-128 463.8 411 62.5
Aqoxy3G00498 Aquilegia oxysepala HOM05D005133 ORTHO05D006685 3.2e-128 462.6 394 64.2
CiPaw.02G036200 Carya illinoinensis HOM05D005133 ORTHO05D006685 2.7e-127 459.5 409 61.1
Ciclev10020434m.g Citrus clementina HOM05D005133 ORTHO05D006685 2.3e-126 456.4 412 61.2
Actinidia20170 Actinidia chinensis HOM05D005133 ORTHO05D006685 1.9e-125 453.4 406 61.3
GSVIVG01027010001 Vitis vinifera HOM05D005133 ORTHO05D006685 1.9e-125 453.4 409 60.4
Thecc.01G351000 Theobroma cacao HOM05D005133 ORTHO05D006685 2.1e-124 449.9 411 60.8
Gohir.D07G145800 Gossypium hirsutum HOM05D005133 ORTHO05D006685 1.2e-122 444.1 412 59.0
Gorai.001G158000 Gossypium raimondii HOM05D005133 ORTHO05D006685 1.2e-122 444.1 412 59.0
Lj7C506T5 Lonicera japonica HOM05D005133 ORTHO05D006685 1.2e-122 444.1 409 60.4
CSS0009332 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 3.4e-122 442.6 406 59.6
Potri.014G091400 Populus trichocarpa HOM05D005133 ORTHO05D006685 3.4e-122 442.6 410 59.8
Prupe.2G179100 Prunus persica HOM05D005133 ORTHO05D006685 7.6e-122 441.4 409 60.4
Cpa.g.sc11.53 Carica papaya HOM05D005133 ORTHO05D006685 1.7e-121 440.3 395 61.8
Sed0023612 Sechium edule HOM05D005133 ORTHO05D006685 1.4e-120 437.2 399 59.1
Cfa007878 Carpinus fangiana HOM05D005133 ORTHO05D006685 3.2e-120 436.0 416 57.7
Duzib133G0222 Durio zibethinus HOM05D005133 ORTHO05D006685 4.2e-120 435.6 412 58.5
Nn7g37315 Nelumbo nucifera HOM05D005133 ORTHO05D006685 2.7e-119 433.0 410 57.8
HanXRQChr17g0562291 Helianthus annuus HOM05D005133 ORTHO05D006685 6.0e-119 431.8 405 58.8
Rhsim07G0009300 Rhododendron simsii HOM05D005133 ORTHO05D006685 1.3e-118 430.6 413 57.6
CSS0040148 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 8.7e-118 427.9 403 59.3
RcHm_v2.0_Chr1g0358181 Rosa chinensis HOM05D005133 ORTHO05D006685 5.7e-117 425.2 426 57.0
ClCG05G014200 Citrullus lanatus HOM05D005133 ORTHO05D006685 7.4e-117 424.9 401 58.6
CSS0000155 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 9.7e-117 424.5 399 58.4
Migut.H02011 Erythranthe guttata HOM05D005133 ORTHO05D006685 9.7e-117 424.5 416 57.9
Peaxi162Scf00020g01713 Petunia axillaris HOM05D005133 ORTHO05D006685 2.2e-116 423.3 409 57.2
Migut.B01807 Erythranthe guttata HOM05D005133 ORTHO05D006685 3.7e-116 422.5 416 57.2
arahy.Tifrunner.gnm1.ann1.YZ0HQS Arachis hypogaea HOM05D005133 ORTHO05D006685 1.1e-115 421.0 412 56.6
arahy.Tifrunner.gnm1.ann1.ZNWN3Y Arachis hypogaea HOM05D005133 ORTHO05D006685 1.1e-115 421.0 404 56.9
Cc06_g17440 Coffea canephora HOM05D005133 ORTHO05D006685 1.8e-115 420.2 404 58.2
DCAR_025229 Daucus carota HOM05D005133 ORTHO05D006685 2.4e-115 419.9 391 58.8
Haze_14198 Corylus avellana HOM05D005133 ORTHO05D006685 3.1e-115 419.5 411 57.2
PGR031G0061 Punica granatum HOM05D005133 ORTHO05D006685 5.3e-115 418.7 404 59.2
MSTRG.20869 Avicennia marina HOM05D005133 ORTHO05D006685 6.9e-115 418.3 413 57.1
Manes.01G251600 Manihot esculenta HOM05D005133 ORTHO05D006685 9.0e-115 417.9 408 58.3
Migut.B01808 Erythranthe guttata HOM05D005133 ORTHO05D006685 3.4e-114 416.0 416 56.7
arahy.Tifrunner.gnm1.ann1.JRPH7J Arachis hypogaea HOM05D005133 ORTHO05D006685 4.5e-114 415.6 411 56.2
QL07p038619 Quercus lobata HOM05D005133 ORTHO05D006685 1.0e-113 414.5 400 57.0
VMungo1127G1104 Vigna mungo HOM05D005133 ORTHO05D006685 1.7e-113 413.7 411 56.2
MD07G1130200 Malus domestica HOM05D005133 ORTHO05D006685 2.9e-113 412.9 411 56.9
Sopen01g039020 Solanum pennellii HOM05D005133 ORTHO05D006685 8.5e-113 411.4 416 57.2
Nitab4.5_0003501g0010 Nicotiana tabacum HOM05D005133 ORTHO05D006685 1.9e-112 410.2 402 58.5
Solyc01g095230.4 Solanum lycopersicum HOM05D005133 ORTHO05D006685 1.9e-112 410.2 416 57.0
TWI34G1432 Tripterygium wilfordii HOM05D005133 ORTHO05D006685 1.9e-112 410.2 398 56.3
TPR.G34211 Trifolium pratense HOM05D005133 ORTHO05D006685 2.5e-112 409.8 416 55.8
PGSC0003DMG401000198 Solanum tuberosum HOM05D005133 ORTHO05D006685 2.7e-111 406.4 413 56.4
Phvul.011G052300 Phaseolus vulgaris HOM05D005133 ORTHO05D006685 3.6e-111 406.0 419 54.9
Sabra14G0066300 Salix brachista HOM05D005133 ORTHO05D006685 1.8e-110 403.7 453 52.3
Psat7g208960 Pisum sativum HOM05D005133 ORTHO05D006685 3.9e-110 402.5 400 54.5
FvH4_7g15540 Fragaria vesca HOM05D005133 ORTHO05D006685 1.5e-109 400.6 383 56.4
LjContig00310g0005517 Lotus japonicus HOM05D005133 ORTHO05D006685 4.3e-109 399.1 421 54.4
FAN10G2939 Fragaria x ananassa HOM05D005133 ORTHO05D006685 7.4e-109 398.3 387 56.8
MELO3C006074.2 Cucumis melo HOM05D005133 ORTHO05D006685 1.3e-108 397.5 427 54.8
PSO384G2230 Papaver somniferum HOM05D005133 ORTHO05D006685 1.3e-108 397.5 247 88.3
PSO478G1127 Papaver somniferum HOM05D005133 ORTHO05D006685 1.7e-108 397.1 341 71.3
FAN06G1776 Fragaria x ananassa HOM05D005133 ORTHO05D006685 2.2e-108 396.7 383 56.1
FAN10G2725 Fragaria x ananassa HOM05D005133 ORTHO05D006685 2.8e-108 396.4 387 56.6
Lalb_Chr19g0138411 Lupinus albus HOM05D005133 ORTHO05D006685 3.7e-108 396.0 410 54.4
SalBow3G2243 Salvia bowleyana HOM05D005133 ORTHO05D006685 6.3e-108 395.2 438 53.0
Ca_20805_v3 Cicer arietinum L. HOM05D005133 ORTHO05D006685 1.4e-107 394.0 412 54.1
SGA_v2.0_scaffold95G28800 Striga asiatica HOM05D003721 ORTHO05D004303 2.4e-107 393.3 379 58.0
CANSAT01G0674 Cannabis sativa HOM05D005133 ORTHO05D006685 1.4e-104 384.0 381 58.5
FAN06G1340 Fragaria x ananassa HOM05D005133 ORTHO05D006685 4.2e-104 382.5 393 53.9
CsaV3_3G008530 Cucumis sativus L. HOM05D005133 ORTHO05D006685 5.5e-104 382.1 410 54.6
Medtr4g068010 Medicago truncatula HOM05D005133 ORTHO05D006685 9.4e-104 381.3 418 52.4
COL.COLO4_06373 Corchorus olitorius HOM05D005133 ORTHO05D006685 1.6e-103 380.6 334 63.5
ATR0626G352 Amborella trichopoda HOM05D005133 ORTHO05D006685 1.0e-102 377.9 402 56.2
SalBow1G3823 Salvia bowleyana HOM05D005133 ORTHO05D006685 8.8e-102 374.8 360 56.7
ECA234G4221 Erigeron canadensis HOM05D005133 ORTHO05D006685 1.5e-101 374.0 404 55.0
Haze_15576 Corylus avellana HOM05D005133 ORTHO05D006685 9.7e-101 371.3 408 51.0
unitig_0.g335 Utricularia gibba HOM05D005133 ORTHO05D006685 9.7e-101 371.3 420 52.1
Sc01g0003150 Simmondsia chinensis HOM05D005133 ORTHO05D006685 6.3e-100 368.6 407 52.8
EL10Ac1g00344 Beta vulgaris HOM05D005133 ORTHO05D006685 1.4e-99 367.5 410 51.7
Glyma.12G050200 Glycine max HOM05D005133 ORTHO05D006685 2.4e-99 366.7 353 56.9
Cfa003860 Carpinus fangiana HOM05D005133 ORTHO05D006685 3.1e-99 366.3 328 61.3
Oeu015214.1 Olea europaea HOM05D005133 ORTHO05D006685 6.9e-99 365.2 498 45.8
Os01g0226500 Oryza sativa ssp. japonica HOM05D005133 ORTHO05D006685 6.9e-99 365.2 412 52.4
Aa31LG1G27580 Aethionema arabicum HOM05D005133 ORTHO05D006685 2.2e-97 360.1 410 50.0
AUR62022626 Chenopodium quinoa HOM05D005133 ORTHO05D006685 6.5e-97 358.6 400 53.8
Gohir.A07G140500 Gossypium hirsutum HOM05D005133 ORTHO05D006685 1.4e-96 357.5 379 55.1
Zm00001eb339090 Zea mays HOM05D005133 ORTHO05D006685 3.2e-96 356.3 433 49.4
Nitab4.5_0000915g0010 Nicotiana tabacum HOM05D005133 ORTHO05D006685 4.2e-96 355.9 383 55.1
Hund27238 Selenicereus undatus HOM05D005133 ORTHO05D006685 5.5e-96 355.5 422 50.9
Eucgr.J01063 Eucalyptus grandis HOM05D005133 ORTHO05D006685 7.2e-96 355.1 398 50.5
Haze_15581 Corylus avellana HOM05D005133 ORTHO05D006685 1.4e-94 350.9 406 49.8
AUR62004420 Chenopodium quinoa HOM05D005133 ORTHO05D006685 1.8e-94 350.5 391 53.7
Lsat_1_v5_gn_4_34900 Lactuca sativa HOM05D005133 ORTHO05D006685 3.0e-94 349.7 409 51.1
CAN.G78.137 Capsicum annuum HOM05D005133 ORTHO05D006685 1.5e-93 347.4 404 51.2
AL4G45460 Arabidopsis lyrata HOM05D005133 ORTHO05D006685 2.0e-93 347.1 405 48.9
Sp5g32810 Schrenkiella parvula HOM05D005133 ORTHO05D006685 1.3e-92 344.4 410 47.8
BraA05t19159Z Brassica rapa HOM05D005133 ORTHO05D006685 1.7e-92 344.0 407 48.9
THA.LOC104817324 Tarenaya hassleriana HOM05D005133 ORTHO05D006685 4.8e-92 342.4 411 48.4
A05p01630 Brassica napus HOM05D005133 ORTHO05D006685 6.3e-92 342.0 407 48.9
C04p01840 Brassica napus HOM05D005133 ORTHO05D006685 3.1e-91 339.7 404 48.5
MBI16_g41624_MAGBIO Magnolia biondii HOM05D005133 ORTHO05D006685 5.3e-91 339.0 405 53.1
BcaC02g12500 Brassica carinata HOM05D005133 ORTHO05D006685 1.2e-90 337.8 404 48.3
BcaC02g12707 Brassica carinata HOM05D005133 ORTHO05D006685 5.9e-90 335.5 398 49.5
Thhalv10028732m.g Eutrema salsugineum HOM05D005133 ORTHO05D006685 2.7e-87 326.6 405 47.7
vmacro20884 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 3.0e-86 323.2 502 41.8
Thhalv10001493m.g Eutrema salsugineum HOM05D005133 ORTHO05D006685 5.7e-85 318.9 404 47.3
Carub.0004s2888 Capsella rubella HOM05D005133 ORTHO05D006685 2.2e-84 317.0 405 45.9
CARHR141470 Cardamine hirsuta HOM05D005133 ORTHO05D006685 2.5e-80 303.5 424 44.8
RcHm_v2.0_Chr1g0357891 Rosa chinensis HOM05D005133 ORTHO05D006685 1.2e-79 301.2 383 50.4
RcHm_v2.0_Chr1g0358091 Rosa chinensis HOM05D005133 ORTHO05D006685 3.0e-78 296.6 295 57.6
vmacro13220 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 1.2e-77 294.7 333 54.1
AT2G46200 Arabidopsis thaliana HOM05D005133 ORTHO05D006685 3.5e-74 283.1 369 46.6
HPP92_023966 Vanilla planifolia HOM05D005133 ORTHO05D006685 5.9e-74 282.3 348 52.9
Ah.05g180080 Amaranthus hybridus HOM05D005133 ORTHO05D006685 6.3e-68 262.3 405 44.4
Pp3c4_26280 Physcomitrium patens HOM05D005133 ORTHO05D006685 9.5e-64 248.4 317 47.6
RcHm_v2.0_Chr1g0358051 Rosa chinensis HOM05D005133 ORTHO05D006685 4.7e-63 246.1 338 48.5
vmacro22850 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 1.6e-58 231.1 252 55.6
CDE09G0708 Ceratophyllum demersum HOM05D005133 ORTHO05D006685 1.0e-57 228.4 318 49.4
Mapoly0001s0322 Marchantia polymorpha HOM05D005133 ORTHO05D006685 1.1e-56 224.9 444 39.0
arahy.Tifrunner.gnm1.ann1.Z00T6Z Arachis hypogaea HOM05D005133 ORTHO05D006685 3.0e-49 200.3 226 49.1
AagrBONN_evm.TU.Sc2ySwM_344.4499 Anthoceros agrestis HOM05D005133 ORTHO05D006685 2.1e-47 194.1 411 36.5
Zm00001eb201120 Zea mays HOM05D005133 ORTHO05D006685 1.7e-33 147.9 146 56.2
Zm00001eb407270 Zea mays HOM05D005133 ORTHO05D006685 1.7e-33 147.9 146 56.2
SMO239G0112 Selaginella moellendorffii HOM05D005133 ORTHO05D006685 1.1e-32 145.2 351 33.0
FAN03G0151 Fragaria x ananassa HOM05D005133 ORTHO05D006685 1.3e-28 131.7 75 74.7
CBR_g45167 Chara braunii HOM05D005133 ORTHO05D006685 8.4e-28 129.0 287 34.8
HanXRQChr04g0107751 Helianthus annuus HOM05D005133 ORTHO05D006685 1.2e-21 108.6 98 66.3
Gohir.A03G093200 Gossypium hirsutum HOM05D005133 ORTHO05D006685 6.4e-20 102.8 169 38.5
Rhsim01G0168000 Rhododendron simsii HOM05D005133 ORTHO05D006685 1.1e-19 102.1 73 80.8
SHI13349 Sapria himalayana HOM05D005133 ORTHO05D006685 8.7e-17 92.4 144 41.0
Glyma.11G125567 Glycine max HOM05D005133 ORTHO05D006685 1.5e-16 91.7 125 36.8
SMO117G0103 Selaginella moellendorffii HOM05D005133 ORTHO05D006685 3.1e-14 84.0 179 39.1
vmacro01745 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 3.4e-13 80.5 148 37.2
AUR62025074 Chenopodium quinoa HOM05D005133 ORTHO05D006685 6.4e-12 76.3 65 63.1
C04p01870 Brassica napus HOM05D005133 ORTHO05D006685 2.5e-11 74.3 38 73.7
SMO114G0022 Selaginella moellendorffii HOM05D005133 ORTHO05D006685 5.5e-11 73.2 109 42.2
RcHm_v2.0_Chr1g0358101 Rosa chinensis HOM05D004139 ORTHO05D004873 6.0e-10 69.7 124 38.7
FvH4_2g33570 Fragaria vesca HOM05D000073 ORTHO05D015767 2.3e-09 67.8 90 47.8
Rhsim01G0167900 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.2e-07 59.3 48 68.8
MELO3C033909.2 Cucumis melo HOM05D005133 ORTHO05D020525 6.9e-06 56.2 74 52.7


User provided reference genes

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