Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G4449 Papaver somniferum HOM05D004213 ORTHO05D005091 6.9e-133 477.2 232 100.0
PSO017G5376 Papaver somniferum HOM05D004213 ORTHO05D005091 3.2e-130 468.4 232 97.4
Hma1.2p1_0623F.1_g191100 Hydrangea macrophylla HOM05D004213 ORTHO05D005091 7.2e-106 387.5 233 78.1
Dinv43865 Davidia involucrata HOM05D004213 ORTHO05D005091 3.0e-104 382.1 233 77.7
Actinidia20165 Actinidia chinensis HOM05D004213 ORTHO05D005091 1.5e-103 379.8 255 72.9
GSVIVG01026970001 Vitis vinifera HOM05D004213 ORTHO05D005091 1.5e-103 379.8 227 76.7
TAR374G1598 Trochodendron aralioides HOM05D004213 ORTHO05D005091 1.3e-102 376.7 225 78.7
MBI16_g00685_MAGBIO Magnolia biondii HOM05D004213 ORTHO05D005091 4.8e-102 374.8 232 75.0
vmacro17287 Vaccinium macrocarpon HOM05D004213 ORTHO05D005091 3.1e-101 372.1 233 75.1
Lalb_Chr10g0096631 Lupinus albus HOM05D004213 ORTHO05D005091 7.0e-101 370.9 224 76.8
TWI09G0095 Tripterygium wilfordii HOM05D004213 ORTHO05D005091 7.0e-101 370.9 233 76.8
Eucgr.C02275 Eucalyptus grandis HOM05D004213 ORTHO05D005091 9.1e-101 370.5 227 78.4
Rhsim07G0009900 Rhododendron simsii HOM05D004213 ORTHO05D005091 9.1e-101 370.5 233 75.5
Hma1.2p1_1013F.1_g247750 Hydrangea macrophylla HOM05D004213 ORTHO05D005091 1.6e-100 369.8 235 74.5
arahy.Tifrunner.gnm1.ann1.HWB48S Arachis hypogaea HOM05D004213 ORTHO05D005091 4.5e-100 368.2 227 74.9
arahy.Tifrunner.gnm1.ann1.LEY1JS Arachis hypogaea HOM05D004213 ORTHO05D005091 4.5e-100 368.2 227 74.9
Ciclev10021940m.g Citrus clementina HOM05D004213 ORTHO05D005091 4.5e-100 368.2 229 74.7
Medtr8g028485 Medicago truncatula HOM05D004213 ORTHO05D005091 4.5e-100 368.2 230 73.9
Lalb_Chr17g0338991 Lupinus albus HOM05D004213 ORTHO05D005091 5.9e-100 367.9 227 75.8
Atru.chr7.1501 Acer truncatum HOM05D004213 ORTHO05D005091 1.0e-99 367.1 233 76.8
Lj3g0016777 Lotus japonicus HOM05D004213 ORTHO05D005091 1.0e-99 367.1 227 75.3
vmacro09727 Vaccinium macrocarpon HOM05D004213 ORTHO05D005091 1.3e-99 366.7 233 74.7
Ca_09511_v3 Cicer arietinum L. HOM05D004213 ORTHO05D005091 1.7e-99 366.3 227 74.9
Ca_30061_v3 Cicer arietinum L. HOM05D004213 ORTHO05D005091 1.7e-99 366.3 227 74.9
FAN06G3506 Fragaria x ananassa HOM05D004213 ORTHO05D005091 2.9e-99 365.5 230 76.1
TPR.G28293 Trifolium pratense HOM05D004213 ORTHO05D005091 2.9e-99 365.5 227 74.9
RcHm_v2.0_Chr1g0366261 Rosa chinensis HOM05D004213 ORTHO05D005091 3.8e-99 365.2 230 75.7
VMungo0540G0091 Vigna mungo HOM05D004213 ORTHO05D005091 3.8e-99 365.2 227 74.0
PGR142G0776 Punica granatum HOM05D004213 ORTHO05D005091 1.5e-98 363.2 218 77.5
ClCG09G006700 Citrullus lanatus HOM05D004213 ORTHO05D005091 1.9e-98 362.8 232 74.1
Psat5g297040 Pisum sativum HOM05D004213 ORTHO05D005091 1.9e-98 362.8 222 74.8
FvH4_7g21940 Fragaria vesca HOM05D004213 ORTHO05D005091 2.5e-98 362.5 230 75.2
RcHm_v2.0_Chr3g0492131 Rosa chinensis HOM05D004213 ORTHO05D005091 7.2e-98 360.9 230 73.9
Psat4g157720 Pisum sativum HOM05D004213 ORTHO05D005091 9.5e-98 360.5 224 74.1
vmacro13225 Vaccinium macrocarpon HOM05D004213 ORTHO05D005091 1.2e-97 360.1 225 75.1
MELO3C015876.2 Cucumis melo HOM05D004213 ORTHO05D005091 1.6e-97 359.8 232 73.7
FAN01G2056 Fragaria x ananassa HOM05D004213 ORTHO05D005091 1.6e-97 359.8 230 75.2
RcHm_v2.0_Chr3g0490801 Rosa chinensis HOM05D004213 ORTHO05D005091 3.6e-97 358.6 230 73.5
Sed0018043 Sechium edule HOM05D004213 ORTHO05D005091 3.6e-97 358.6 232 73.7
ATR0751G024 Amborella trichopoda HOM05D004213 ORTHO05D005091 4.7e-97 358.2 234 74.4
Ca_03495_v3 Cicer arietinum L. HOM05D004213 ORTHO05D005091 8.0e-97 357.5 227 73.1
Medtr8g087440 Medicago truncatula HOM05D004213 ORTHO05D005091 1.0e-96 357.1 230 72.2
CsaV3_7G028460 Cucumis sativus L. HOM05D004213 ORTHO05D005091 4.0e-96 355.1 232 72.8
Migut.B01801 Erythranthe guttata HOM05D004213 ORTHO05D005091 5.2e-96 354.8 241 71.4
COL.COLO4_19238 Corchorus olitorius HOM05D004213 ORTHO05D005091 6.8e-96 354.4 239 72.0
Phvul.006G145900 Phaseolus vulgaris HOM05D004213 ORTHO05D005091 8.8e-96 354.0 227 71.4
Duzib138G1303 Durio zibethinus HOM05D004213 ORTHO05D005091 7.5e-95 350.9 230 74.8
Nitab4.5_0007641g0010 Nicotiana tabacum HOM05D004213 ORTHO05D005091 2.2e-94 349.4 227 72.7
FAN03G2999 Fragaria x ananassa HOM05D004213 ORTHO05D005091 3.7e-94 348.6 245 69.0
FAN10G1826 Fragaria x ananassa HOM05D004213 ORTHO05D005091 3.7e-94 348.6 245 69.4
PGSC0003DMG400031793 Solanum tuberosum HOM05D004213 ORTHO05D005091 3.7e-94 348.6 233 73.4
CDE10G0889 Ceratophyllum demersum HOM05D004213 ORTHO05D005091 4.9e-94 348.2 233 71.2
Nn1g07606 Nelumbo nucifera HOM05D004213 ORTHO05D005091 6.3e-94 347.8 235 72.3
Nitab4.5_0000116g0380 Nicotiana tabacum HOM05D004213 ORTHO05D005091 6.3e-94 347.8 227 72.7
Potri.002G164800 Populus trichocarpa HOM05D004213 ORTHO05D005091 6.3e-94 347.8 227 72.7
Sopen09g030140 Solanum pennellii HOM05D004213 ORTHO05D005091 1.1e-93 347.1 233 72.1
Thecc.01G352200 Theobroma cacao HOM05D004213 ORTHO05D005091 1.4e-93 346.7 229 73.8
Hund26583 Selenicereus undatus HOM05D004213 ORTHO05D005091 2.4e-93 345.9 226 72.6
Solyc09g075370.3 Solanum lycopersicum HOM05D004213 ORTHO05D005091 3.1e-93 345.5 233 72.1
CANSAT56G1246 Cannabis sativa HOM05D004213 ORTHO05D005091 4.1e-93 345.1 233 72.1
Haze_15567 Corylus avellana HOM05D004213 ORTHO05D005091 4.1e-93 345.1 233 70.8
HanXRQChr06g0170371 Helianthus annuus HOM05D004213 ORTHO05D005091 5.4e-93 344.7 237 70.0
Cfa003870 Carpinus fangiana HOM05D004213 ORTHO05D005091 7.0e-93 344.4 233 70.0
THA.LOC104827605 Tarenaya hassleriana HOM05D004213 ORTHO05D005091 7.0e-93 344.4 234 69.7
Gorai.004G155200 Gossypium raimondii HOM05D004213 ORTHO05D005091 9.2e-93 344.0 227 74.4
Oeu010628.1 Olea europaea HOM05D004213 ORTHO05D005091 1.2e-92 343.6 239 69.5
MD07G1193700 Malus domestica HOM05D004213 ORTHO05D005091 1.6e-92 343.2 236 72.5
MD07G1194000 Malus domestica HOM05D004213 ORTHO05D005091 1.6e-92 343.2 236 72.5
Os06g0300600 Oryza sativa ssp. japonica HOM05D004213 ORTHO05D005091 1.6e-92 343.2 233 70.0
Gohir.D08G149400 Gossypium hirsutum HOM05D004213 ORTHO05D005091 2.0e-92 342.8 227 74.0
TPR.G7188 Trifolium pratense HOM05D004213 ORTHO05D005091 2.0e-92 342.8 219 72.6
Glyma.16G031500 Glycine max HOM05D004213 ORTHO05D005091 2.7e-92 342.4 222 72.1
Oeu004904.1 Olea europaea HOM05D004213 ORTHO05D005091 4.5e-92 341.7 229 70.7
CSS0029792 Camellia sinensis var. sinensis HOM05D004213 ORTHO05D005091 5.9e-92 341.3 235 71.5
CSS0049269 Camellia sinensis var. sinensis HOM05D004213 ORTHO05D005091 5.9e-92 341.3 235 71.5
Nitab4.5_0001141g0050 Nicotiana tabacum HOM05D004213 ORTHO05D005091 7.8e-92 340.9 227 71.8
Sopen04g004260 Solanum pennellii HOM05D004213 ORTHO05D005091 7.8e-92 340.9 232 72.4
HPP92_022817 Vanilla planifolia HOM05D004213 ORTHO05D005091 1.7e-91 339.7 214 73.4
Gohir.A04G053400 Gossypium hirsutum HOM05D004213 ORTHO05D005091 8.6e-91 337.4 227 73.1
Sabra02G0146700 Salix brachista HOM05D004213 ORTHO05D005091 8.6e-91 337.4 227 71.8
DCAR_025215 Daucus carota HOM05D004213 ORTHO05D005091 1.1e-90 337.0 231 68.8
PGSC0003DMG400032548 Solanum tuberosum HOM05D004213 ORTHO05D005091 1.5e-90 336.7 233 71.2
EL10Ac1g01391 Beta vulgaris HOM05D004213 ORTHO05D005091 5.6e-90 334.7 232 70.3
Glyma.15G111800 Glycine max HOM05D004213 ORTHO05D005091 5.6e-90 334.7 224 70.1
Aqoxy5G03866 Aquilegia oxysepala HOM05D004213 ORTHO05D005091 2.1e-89 332.8 241 66.8
SalBow3G3674 Salvia bowleyana HOM05D004213 ORTHO05D005091 3.6e-89 332.0 244 69.3
BcaB01g03237 Brassica carinata HOM05D004213 ORTHO05D005091 1.8e-88 329.7 238 64.3
MD10G1064600 Malus domestica HOM05D004213 ORTHO05D005091 3.0e-88 328.9 236 69.9
Zm00001eb381110 Zea mays HOM05D004213 ORTHO05D005091 3.0e-88 328.9 230 67.8
AUR62017900 Chenopodium quinoa HOM05D004213 ORTHO05D005091 5.2e-88 328.2 224 70.1
AL1G26590 Arabidopsis lyrata HOM05D004213 ORTHO05D005091 8.9e-88 327.4 222 67.6
AT1G14620 Arabidopsis thaliana HOM05D004213 ORTHO05D005091 8.9e-88 327.4 222 67.6
Carub.0001s1438 Capsella rubella HOM05D004213 ORTHO05D005091 8.9e-88 327.4 222 67.6
Glyma.09G007400 Glycine max HOM05D004213 ORTHO05D005091 1.2e-87 327.0 227 68.3
Ah.02g117780 Amaranthus hybridus HOM05D004213 ORTHO05D005091 2.6e-87 325.9 223 69.1
Thhalv10008660m.g Eutrema salsugineum HOM05D004213 ORTHO05D005091 2.6e-87 325.9 222 66.7
Sp1g12980 Schrenkiella parvula HOM05D004213 ORTHO05D005091 2.6e-87 325.9 222 67.1
unitig_0.g337 Utricularia gibba HOM05D004213 ORTHO05D005091 3.4e-87 325.5 227 70.0
Sp4g28190 Schrenkiella parvula HOM05D004213 ORTHO05D005091 5.7e-87 324.7 222 66.7
MSTRG.17300 Avicennia marina HOM05D004213 ORTHO05D005091 7.5e-87 324.3 227 70.9
CARHR015120 Cardamine hirsuta HOM05D004213 ORTHO05D005091 7.5e-87 324.3 222 66.2
AUR62003587 Chenopodium quinoa HOM05D004213 ORTHO05D005091 7.5e-87 324.3 224 69.6
Lj9A589G62 Lonicera japonica HOM05D004213 ORTHO05D005091 7.5e-87 324.3 235 68.1
A03p25480 Brassica napus HOM05D004213 ORTHO05D005091 1.3e-86 323.6 240 64.6
SGA_v2.0_scaffold4G02277 Striga asiatica HOM05D004213 ORTHO05D005091 1.7e-86 323.2 286 60.1
BraA04t18889Z Brassica rapa HOM05D005821 ORTHO05D006649 2.9e-86 322.4 219 67.1
BraA03t11766Z Brassica rapa HOM05D004213 ORTHO05D005091 3.7e-86 322.0 240 63.3
Aa31LG1G27530 Aethionema arabicum HOM05D004213 ORTHO05D005091 6.4e-86 321.2 234 64.5
C04p72100 Brassica napus HOM05D005821 ORTHO05D006649 6.4e-86 321.2 219 65.8
CiPaw.02G035500 Carya illinoinensis HOM05D004213 ORTHO05D005091 6.4e-86 321.2 235 66.4
BcaC01g05093 Brassica carinata HOM05D004213 ORTHO05D005091 8.3e-86 320.9 240 64.2
C03p30410 Brassica napus HOM05D004213 ORTHO05D005091 8.3e-86 320.9 240 64.2
BcaC02g07022 Brassica carinata HOM05D004213 ORTHO05D005091 1.1e-85 320.5 238 63.0
BolC3t15389H Brassica oleracea HOM05D004213 ORTHO05D005091 2.4e-85 319.3 240 64.2
Peaxi162Scf00037g01020 Petunia axillaris HOM05D004213 ORTHO05D005091 7.8e-84 314.3 233 67.0
CiPaw.01G067700 Carya illinoinensis HOM05D004213 ORTHO05D005091 3.0e-83 312.4 233 66.1
Cc02_g38590 Coffea canephora HOM05D004213 ORTHO05D005091 5.6e-82 308.1 227 63.9
Manes.05G029000 Manihot esculenta HOM05D004213 ORTHO05D005091 2.1e-81 306.2 225 66.7
Gohir.A08G128100 Gossypium hirsutum HOM05D004213 ORTHO05D005091 8.9e-80 300.8 227 66.5
Dinv32523 Davidia involucrata HOM05D004213 ORTHO05D005091 2.0e-79 299.7 185 75.7
Lsat_1_v5_gn_7_2701 Lactuca sativa HOM05D004213 ORTHO05D005091 2.2e-78 296.2 237 61.6
ECA236G3941 Erigeron canadensis HOM05D004213 ORTHO05D005091 6.4e-78 294.7 237 59.5
Solyc04g009140.4 Solanum lycopersicum HOM05D004213 ORTHO05D005091 8.6e-75 284.3 180 73.3
FAN06G0959 Fragaria x ananassa HOM05D004213 ORTHO05D005091 1.5e-74 283.5 182 75.8
Gorai.009G392100 Gossypium raimondii HOM05D004213 ORTHO05D005091 7.3e-74 281.2 227 64.3
Lj9A590G54 Lonicera japonica HOM05D004213 ORTHO05D005091 2.1e-73 279.6 240 61.2
Nn1g07699 Nelumbo nucifera HOM05D004213 ORTHO05D005091 4.0e-72 275.4 235 61.7
Cpa.g.sc11.71 Carica papaya HOM05D004213 ORTHO05D005091 2.6e-71 272.7 225 61.8
BolC4t28619H Brassica oleracea HOM05D005821 ORTHO05D005091 1.2e-68 263.8 212 58.5
SEGI_36995 Sequoiadendron giganteum HOM05D004213 ORTHO05D005091 6.2e-65 251.5 211 54.0
Gohir.D04G091100 Gossypium hirsutum HOM05D004213 ORTHO05D005091 2.0e-63 246.5 162 72.8
Rhsim09G0104800 Rhododendron simsii HOM05D004213 ORTHO05D005091 3.4e-63 245.7 193 65.3
CAN.G472.27 Capsicum annuum HOM05D004213 ORTHO05D005091 4.4e-63 245.4 159 71.1
DCAR_009468 Daucus carota HOM05D004213 ORTHO05D005091 7.6e-63 244.6 157 71.3
Sc16g0003870 Simmondsia chinensis HOM05D004213 ORTHO05D005091 4.1e-61 238.8 190 67.4
Prupe.2G231400 Prunus persica HOM05D004213 ORTHO05D005091 1.0e-51 207.6 145 73.1
Mapoly0025s0100 Marchantia polymorpha HOM05D004213 ORTHO05D005091 1.6e-49 200.3 211 47.4
AagrBONN_evm.TU.Sc2ySwM_228.381 Anthoceros agrestis HOM05D004213 ORTHO05D005091 2.8e-49 199.5 201 51.7
MBI16_g10331_MAGBIO Magnolia biondii HOM05D004213 ORTHO05D005091 2.8e-49 199.5 120 73.3
Pp3c13_9680 Physcomitrium patens HOM05D004213 ORTHO05D005091 6.2e-49 198.4 225 46.2
AagrBONN_evm.TU.Sc2ySwM_117.3677 Anthoceros agrestis HOM05D004213 ORTHO05D005091 8.1e-49 198.0 201 51.7
COL.COLO4_07824 Corchorus olitorius HOM05D004213 ORTHO05D005091 5.3e-48 195.3 186 54.3
CARHR141400 Cardamine hirsuta HOM05D004213 ORTHO05D005091 4.9e-46 188.7 174 54.6
Medtr7g117435 Medicago truncatula HOM05D004213 ORTHO05D005091 9.6e-42 174.5 124 62.1
CBR_g37539 Chara braunii HOM05D004213 ORTHO05D005091 1.7e-38 163.7 209 41.1
MD05G1056600 Malus domestica HOM05D004213 ORTHO05D005091 1.3e-35 154.1 158 53.2
Atru.chr1.2758 Acer truncatum HOM05D004213 ORTHO05D005091 2.5e-34 149.8 90 74.4
EL10Ac6g15290 Beta vulgaris HOM05D004213 ORTHO05D012437 5.6e-34 148.7 99 67.7
C04p01920 Brassica napus HOM05D004213 ORTHO05D005091 1.5e-31 140.6 152 46.1
SMO271G0103 Selaginella moellendorffii HOM05D004213 ORTHO05D005091 2.6e-31 139.8 229 38.0
VMungo0331G0027 Vigna mungo HOM05D004213 ORTHO05D005091 7.6e-31 138.3 93 71.0
MBI16_g18199_MAGBIO Magnolia biondii HOM05D004213 ORTHO05D005091 2.5e-26 123.2 99 62.6
SHI13371 Sapria himalayana HOM05D004213 ORTHO05D005091 9.7e-26 121.3 104 59.6
BcaC02g12495 Brassica carinata HOM05D004213 ORTHO05D005091 6.5e-22 108.6 90 55.6
MCO04G325 Micromonas commoda HOM05D004213 ORTHO05D005091 2.7e-20 103.2 194 29.4
PGSC0003DMG402011505 Solanum tuberosum HOM05D004213 ORTHO05D005091 7.9e-20 101.7 65 70.8
FvH4_7g22001 Fragaria vesca HOM05D004065 ORTHO05D004806 1.1e-18 97.8 61 75.4
FAN01G2126 Fragaria x ananassa HOM05D004065 ORTHO05D004806 1.1e-18 97.8 61 75.4
FAN06G3959 Fragaria x ananassa HOM05D004213 ORTHO05D005091 1.9e-18 97.1 72 68.1
FAN01G2862 Fragaria x ananassa HOM05D004213 ORTHO05D005091 7.4e-18 95.1 72 66.7
SMO308G0077 Selaginella moellendorffii HOM05D004213 ORTHO05D005091 7.4e-18 95.1 107 44.9
CAN.G467.8 Capsicum annuum HOM05D004213 ORTHO05D005091 8.2e-17 91.7 73 65.8
FAN03G3471 Fragaria x ananassa HOM05D004213 ORTHO05D005091 7.2e-13 78.6 48 75.0
Aa31LG5G23500 Aethionema arabicum HOM05D004213 ORTHO05D005091 9.4e-13 78.2 70 60.0
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 1.4e-11 74.3 44 79.5
Cfa024785 Carpinus fangiana HOM05D004213 ORTHO05D122664 7.4e-10 68.6 139 33.1
Rhsim07G0218600 Rhododendron simsii HOM05D004213 ORTHO05D339259 2.0e-07 60.5 37 70.3
COL.COLO4_35570 Corchorus olitorius HOM05D002230 ORTHO05D002441 3.4e-07 59.7 50 64.0
PGSC0003DMG401011505 Solanum tuberosum HOM05D004213 ORTHO05D005091 4.5e-07 59.3 53 64.2
Ah.13g065600 Amaranthus hybridus HOM05D000001 ORTHO05D010162 7.7e-07 58.5 43 65.1
RcHm_v2.0_Chr1g0366151 Rosa chinensis HOM05D004213 ORTHO05D005091 3.8e-06 56.2 40 57.5


User provided reference genes

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