Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G2612 Papaver somniferum HOM05D003347 ORTHO05D003821 2.3e-87 326.2 275 100.0
TAR381G0729 Trochodendron aralioides HOM05D003347 ORTHO05D003821 4.8e-48 195.7 279 70.6
TAR376G0009 Trochodendron aralioides HOM05D003347 ORTHO05D003821 4.9e-45 185.7 279 60.9
Hund07201 Selenicereus undatus HOM05D003347 ORTHO05D003821 3.9e-42 176.0 272 62.9
TAR628G0882 Trochodendron aralioides HOM05D003347 ORTHO05D003821 2.8e-40 169.9 277 66.4
Aqoxy6G00189 Aquilegia oxysepala HOM05D003347 ORTHO05D003821 1.1e-39 167.9 275 72.4
CDE08G0312 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 4.5e-38 162.5 289 57.8
ATR0684G168 Amborella trichopoda HOM05D003347 ORTHO05D003821 1.6e-35 154.1 279 65.2
Nn5g28237 Nelumbo nucifera HOM05D003347 ORTHO05D003821 2.1e-35 153.7 272 66.9
Lj6g0014149 Lotus japonicus HOM05D003347 ORTHO05D003821 2.7e-35 153.3 281 57.3
TWI14G1287 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 3.5e-35 152.9 280 61.1
Atru.chr6.636 Acer truncatum HOM05D003347 ORTHO05D003821 8.7e-34 148.3 204 67.6
CSS0039803 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 4.3e-33 146.0 202 63.4
CDE06G2684 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 3.7e-32 142.9 278 60.4
TWI31G0129 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 9.0e-31 138.3 285 47.7
Hma1.2p1_0217F.1_g092040 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 2.6e-30 136.7 278 62.6
AUR62014268 Chenopodium quinoa HOM05D003347 ORTHO05D003821 1.0e-29 134.8 275 61.1
Gohir.A04G127400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 3.8e-29 132.9 280 56.8
AUR62042720 Chenopodium quinoa HOM05D003347 ORTHO05D003821 1.9e-28 130.6 237 63.3
Haze_01671 Corylus avellana HOM05D003347 ORTHO05D003821 1.9e-28 130.6 236 62.3
Thecc.02G038200 Theobroma cacao HOM05D003347 ORTHO05D003821 1.9e-28 130.6 280 59.6
CSS0043936 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 4.2e-28 129.4 201 64.7
Duzib132G0710 Durio zibethinus HOM05D003347 ORTHO05D003821 4.2e-28 129.4 280 61.4
MBI03_g33029_MAGBIO Magnolia biondii HOM05D003347 ORTHO05D003821 4.2e-28 129.4 294 53.7
Phvul.006G214600 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 4.2e-28 129.4 237 62.9
Gorai.008G042400 Gossypium raimondii HOM05D003347 ORTHO05D003821 5.5e-28 129.0 280 56.1
arahy.Tifrunner.gnm1.ann1.N22SFW Arachis hypogaea HOM05D003347 ORTHO05D003821 9.4e-28 128.3 282 59.9
HPP92_009365 Vanilla planifolia HOM05D003347 ORTHO05D003821 1.2e-27 127.9 195 57.9
PGR042G0677 Punica granatum HOM05D003347 ORTHO05D003821 1.6e-27 127.5 281 64.4
Sc03g0004210 Simmondsia chinensis HOM05D003347 ORTHO05D003821 1.6e-27 127.5 277 61.0
PGR102G0439 Punica granatum HOM05D003347 ORTHO05D003821 2.1e-27 127.1 274 60.9
Dinv24283 Davidia involucrata HOM05D003347 ORTHO05D003821 2.7e-27 126.7 235 61.7
MD15G1423300 Malus domestica HOM05D003347 ORTHO05D003821 2.7e-27 126.7 170 69.4
Manes.07G015700 Manihot esculenta HOM05D003347 ORTHO05D003821 4.6e-27 125.9 238 65.1
HanXRQChr03g0071751 Helianthus annuus HOM05D003347 ORTHO05D003821 6.1e-27 125.6 204 63.2
Nitab4.5_0000496g0140 Nicotiana tabacum HOM05D003347 ORTHO05D003821 6.1e-27 125.6 192 68.2
Gohir.D12G040600 Gossypium hirsutum HOM05D003347 ORTHO05D003821 7.9e-27 125.2 236 65.7
CDE06G2842 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 1.0e-26 124.8 293 57.7
Dinv34344 Davidia involucrata HOM05D003347 ORTHO05D003821 2.3e-26 123.6 275 55.6
Haze_25385 Corylus avellana HOM05D003347 ORTHO05D003821 5.1e-26 122.5 161 64.0
Gorai.012G161200 Gossypium raimondii HOM05D003347 ORTHO05D003821 5.1e-26 122.5 301 55.5
Eucgr.H05071 Eucalyptus grandis HOM05D003347 ORTHO05D003821 6.7e-26 122.1 273 64.1
Cfa002207 Carpinus fangiana HOM05D003347 ORTHO05D003821 1.1e-25 121.3 182 51.6
TWI79G0161 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.1e-25 121.3 272 46.3
Gohir.D04G172100 Gossypium hirsutum HOM05D003347 ORTHO05D003821 3.3e-25 119.8 280 56.1
Sed0005094 Sechium edule HOM05D003347 ORTHO05D003821 4.3e-25 119.4 280 60.0
VMungo0540G0141 Vigna mungo HOM05D003347 ORTHO05D003821 1.7e-24 117.5 282 57.4
Actinidia26147 Actinidia chinensis HOM05D003347 ORTHO05D003821 2.8e-24 116.7 204 55.4
GSVIVG01022926001 Vitis vinifera HOM05D003347 ORTHO05D003821 2.8e-24 116.7 280 58.2
A06p07670 Brassica napus HOM05D003347 ORTHO05D003821 3.7e-24 116.3 245 54.3
Cfa005522 Carpinus fangiana HOM05D003347 ORTHO05D003821 3.7e-24 116.3 237 60.3
Cc02_g22510 Coffea canephora HOM05D003347 ORTHO05D003821 4.8e-24 115.9 163 68.7
Nn1g08766 Nelumbo nucifera HOM05D003347 ORTHO05D003821 6.3e-24 115.5 280 60.7
Dinv05136 Davidia involucrata HOM05D000040 ORTHO05D000267 3.1e-23 113.2 261 65.9
Zm00001eb197610 Zea mays HOM05D003347 ORTHO05D003821 4.1e-23 112.8 204 49.5
ECA236G0662 Erigeron canadensis HOM05D003347 ORTHO05D003821 5.3e-23 112.5 202 59.4
SGA_v2.0_scaffold1G00306 Striga asiatica HOM05D003347 ORTHO05D003821 6.9e-23 112.1 204 62.7
Lalb_Chr18g0060901 Lupinus albus HOM05D003347 ORTHO05D003821 9.1e-23 111.7 281 55.9
arahy.Tifrunner.gnm1.ann1.CXB9HG Arachis hypogaea HOM05D003347 ORTHO05D003821 1.5e-22 110.9 235 63.0
Oeu008895.1 Olea europaea HOM05D003347 ORTHO05D003821 2.0e-22 110.5 163 64.4
CiPaw.05G044400 Carya illinoinensis HOM05D003347 ORTHO05D003821 2.6e-22 110.2 280 52.5
AUR62006920 Chenopodium quinoa HOM05D003347 ORTHO05D003821 3.4e-22 109.8 158 65.8
CSS0030084 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 7.7e-22 108.6 188 56.9
CANSAT11G2200 Cannabis sativa HOM05D003347 ORTHO05D003821 7.7e-22 108.6 281 55.5
CiPaw.03G114900 Carya illinoinensis HOM05D003347 ORTHO05D003821 1.3e-21 107.8 189 60.3
Gohir.A12G031700 Gossypium hirsutum HOM05D003347 ORTHO05D003821 1.7e-21 107.5 280 56.4
Lj9C306T9 Lonicera japonica HOM05D003347 ORTHO05D003821 1.7e-21 107.5 162 67.3
Zm00001eb113690 Zea mays HOM05D003347 ORTHO05D003821 1.7e-21 107.5 204 53.9
Medtr2g007150 Medicago truncatula HOM05D003347 ORTHO05D003821 2.2e-21 107.1 293 57.0
MELO3C014381.2 Cucumis melo HOM05D003347 ORTHO05D003821 2.9e-21 106.7 279 53.8
Glyma.06G158900 Glycine max HOM05D003347 ORTHO05D003821 3.8e-21 106.3 163 62.6
EL10Ac6g14071 Beta vulgaris HOM05D003347 ORTHO05D003821 8.5e-21 105.1 201 60.7
SEGI_15810 Sequoiadendron giganteum HOM05D003347 ORTHO05D003821 8.5e-21 105.1 194 62.4
BraA06t23968Z Brassica rapa HOM05D003347 ORTHO05D003821 1.1e-20 104.8 212 53.3
Gorai.006G007100 Gossypium raimondii HOM05D003347 ORTHO05D003821 4.2e-20 102.8 165 65.5
CsaV3_6G037360 Cucumis sativus L. HOM05D003347 ORTHO05D003821 5.5e-20 102.4 280 52.5
Thecc.01G142300 Theobroma cacao HOM05D003347 ORTHO05D003821 5.5e-20 102.4 193 56.5
QL10p039663 Quercus lobata HOM05D003347 ORTHO05D003821 7.2e-20 102.1 143 51.0
Solyc05g056460.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 7.2e-20 102.1 265 59.2
CARHR051920 Cardamine hirsuta HOM05D003347 ORTHO05D003821 2.7e-19 100.1 161 65.8
Rhsim10G0131200 Rhododendron simsii HOM05D003347 ORTHO05D003821 2.7e-19 100.1 280 55.0
MSTRG.23472 Avicennia marina HOM05D003347 ORTHO05D003821 4.7e-19 99.4 258 52.3
Potri.001G211000 Populus trichocarpa HOM05D003347 ORTHO05D003821 4.7e-19 99.4 278 56.8
BolC5t29665H Brassica oleracea HOM05D003347 ORTHO05D003821 6.1e-19 99.0 212 56.1
Gohir.A09G006400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 6.1e-19 99.0 165 62.4
Oeu008894.1 Olea europaea HOM05D003347 ORTHO05D003821 6.1e-19 99.0 378 46.0
Prupe.1G568600 Prunus persica HOM05D003347 ORTHO05D003821 6.1e-19 99.0 301 55.1
Dinv19368 Davidia involucrata HOM05D003347 ORTHO05D003821 1.4e-18 97.8 276 59.4
Sc09g0002030 Simmondsia chinensis HOM05D003347 ORTHO05D003821 1.8e-18 97.4 159 60.4
TPR.G2109 Trifolium pratense HOM05D003347 ORTHO05D003821 1.8e-18 97.4 293 56.0
PGSC0003DMG400023323 Solanum tuberosum HOM05D003347 ORTHO05D003821 2.3e-18 97.1 265 59.2
Gohir.D09G005500 Gossypium hirsutum HOM05D003347 ORTHO05D003821 5.1e-18 95.9 165 63.6
BcaC05g24971 Brassica carinata HOM05D003347 ORTHO05D003821 6.7e-18 95.5 172 64.0
DCAR_029250 Daucus carota HOM05D003347 ORTHO05D003821 6.7e-18 95.5 239 62.3
Oeu033124.1 Olea europaea HOM05D002729 ORTHO05D003163 6.7e-18 95.5 195 56.4
Lsat_1_v5_gn_9_118960 Lactuca sativa HOM05D003347 ORTHO05D003821 1.5e-17 94.4 167 62.9
Nitab4.5_0013117g0020 Nicotiana tabacum HOM05D003347 ORTHO05D003821 2.0e-17 94.0 149 71.1
Atru.chr4.1125 Acer truncatum HOM05D003347 ORTHO05D003821 2.6e-17 93.6 194 55.2
Sed0017913 Sechium edule HOM05D003347 ORTHO05D003821 4.4e-17 92.8 86 65.1
SMO163G0068 Selaginella moellendorffii HOM05D003347 ORTHO05D003821 4.4e-17 92.8 166 55.4
Cpa.g.sc113.60 Carica papaya HOM05D003347 ORTHO05D003821 5.7e-17 92.4 237 58.2
FAN16G0856 Fragaria x ananassa HOM05D003347 ORTHO05D003821 5.7e-17 92.4 205 55.1
Thhalv10008376m.g Eutrema salsugineum HOM05D003347 ORTHO05D003821 9.7e-17 91.7 212 56.6
QL11p018508 Quercus lobata HOM05D003347 ORTHO05D003821 1.3e-16 91.3 162 67.3
THA.LOC104823661 Tarenaya hassleriana HOM05D003347 ORTHO05D003821 1.3e-16 91.3 278 52.9
CAN.G1577.23 Capsicum annuum HOM05D003347 ORTHO05D003821 1.7e-16 90.9 307 46.9
FAN28G2623 Fragaria x ananassa HOM05D003347 ORTHO05D003821 1.7e-16 90.9 179 57.0
Potri.019G001900 Populus trichocarpa HOM05D003347 ORTHO05D003821 1.7e-16 90.9 175 55.4
Carub.0001s1045 Capsella rubella HOM05D003347 ORTHO05D003821 2.8e-16 90.1 212 54.7
Oeu037839.1 Olea europaea HOM05D003347 ORTHO05D003821 3.7e-16 89.7 271 52.0
C05p09260 Brassica napus HOM05D003347 ORTHO05D003821 8.2e-16 88.6 182 60.4
RcHm_v2.0_Chr5g0049401 Rosa chinensis HOM05D003347 ORTHO05D003821 1.1e-15 88.2 205 58.5
THA.LOC104819278 Tarenaya hassleriana HOM05D003347 ORTHO05D003821 1.4e-15 87.8 205 48.8
CiPaw.06G147300 Carya illinoinensis HOM05D003347 ORTHO05D003821 1.8e-15 87.4 236 58.5
Duzib248G0125 Durio zibethinus HOM05D003347 ORTHO05D003821 1.8e-15 87.4 284 54.2
Psat1g221480 Pisum sativum HOM05D003347 ORTHO05D003821 1.8e-15 87.4 308 45.5
Peaxi162Scf00152g01328 Petunia axillaris HOM05D003347 ORTHO05D003821 2.4e-15 87.0 217 53.5
Hund12985 Selenicereus undatus HOM05D003347 ORTHO05D003821 5.3e-15 85.9 266 42.5
Aa31LG1G3970 Aethionema arabicum HOM05D003347 ORTHO05D003821 2.0e-14 84.0 134 62.7
TPR.G28695 Trifolium pratense HOM05D003347 ORTHO05D003821 2.0e-14 84.0 191 52.4
Glyma.08G186200 Glycine max HOM05D003347 ORTHO05D003821 2.6e-14 83.6 282 53.9
vmacro01761 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 5.9e-14 82.4 82 62.2
Lsat_1_v5_gn_1_80721 Lactuca sativa HOM05D002427 ORTHO05D002818 7.7e-14 82.0 126 52.4
Lj1g0014274 Lotus japonicus HOM05D003347 ORTHO05D003821 7.7e-14 82.0 160 61.9
MD08G1229400 Malus domestica HOM05D003347 ORTHO05D003821 1.0e-13 81.6 159 66.0
EL10Ac4g09689 Beta vulgaris HOM05D003347 ORTHO05D003821 1.3e-13 81.3 159 51.6
HanXRQChr01g0017031 Helianthus annuus HOM05D003347 ORTHO05D003821 1.3e-13 81.3 102 55.9
unitig_60.g25508 Utricularia gibba HOM05D003347 ORTHO05D003821 1.3e-13 81.3 198 53.5
Nitab4.5_0003344g0020 Nicotiana tabacum HOM05D003347 ORTHO05D003821 1.7e-13 80.9 134 66.4
VMungo1309G3119 Vigna mungo HOM05D003347 ORTHO05D003821 1.7e-13 80.9 163 60.7
Hma1.2p1_0930F.1_g238020 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 2.9e-13 80.1 177 54.2
Ciclev10002126m.g Citrus clementina HOM05D003347 ORTHO05D003821 5.0e-13 79.3 236 58.1
Hma1.2p1_1197F.1_g266100 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 5.0e-13 79.3 69 71.0
vmacro12779 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 5.0e-13 79.3 105 64.8
Pp3c15_6590 Physcomitrium patens HOM05D003347 ORTHO05D003821 6.5e-13 79.0 186 52.7
FvH4_3g26951 Fragaria vesca HOM05D003347 ORTHO05D003821 8.5e-13 78.6 205 56.6
FAN11G2552 Fragaria x ananassa HOM05D003347 ORTHO05D003821 8.5e-13 78.6 205 56.6
COL.COLO4_12116 Corchorus olitorius HOM05D012218 ORTHO05D003821 1.1e-12 78.2 194 47.9
FAN21G3803 Fragaria x ananassa HOM05D003347 ORTHO05D003821 1.9e-12 77.4 205 56.6
Peaxi162Scf00011g00421 Petunia axillaris HOM05D003347 ORTHO05D003821 1.9e-12 77.4 260 53.5
Cpa.g.sc37.62 Carica papaya HOM05D003347 ORTHO05D003821 2.5e-12 77.0 74 60.8
Lj4A831G75 Lonicera japonica HOM05D003347 ORTHO05D003821 2.5e-12 77.0 109 67.9
TWI59G0889 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 3.2e-12 76.6 185 55.7
Ca_00076_v3 Cicer arietinum L. HOM05D005880 ORTHO05D007114 4.2e-12 76.3 159 62.9
SGA_v2.0_scaffold189G40392 Striga asiatica HOM05D000087 ORTHO05D000793 7.2e-12 75.5 189 51.3
Lalb_Chr11g0068781 Lupinus albus HOM05D003347 ORTHO05D003821 9.4e-12 75.1 84 59.5
ClCG09G014210 Citrullus lanatus HOM05D003347 ORTHO05D003821 6.1e-11 72.4 314 45.5
vmacro19891 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 1.4e-10 71.2 235 52.3
Migut.H00863 Erythranthe guttata HOM05D003347 ORTHO05D003821 1.8e-10 70.9 170 58.2
MD15G1137800 Malus domestica HOM05D003347 ORTHO05D003821 2.3e-10 70.5 190 50.0
FAN25G2408 Fragaria x ananassa HOM05D003347 ORTHO05D003821 3.0e-10 70.1 205 55.1
RcHm_v2.0_Chr2g0123211 Rosa chinensis HOM05D003347 ORTHO05D003821 3.0e-10 70.1 158 53.2
Nitab4.5_0000816g0010 Nicotiana tabacum HOM05D003347 ORTHO05D003821 4.0e-10 69.7 231 46.8
Phvul.009G151400 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 4.0e-10 69.7 168 56.5
SalBow5G2549 Salvia bowleyana HOM05D003347 ORTHO05D003821 4.0e-10 69.7 100 58.0
TWI23G0580 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 5.2e-10 69.3 195 56.9
Sopen05g034850 Solanum pennellii HOM05D003347 ORTHO05D003821 6.7e-10 68.9 265 55.8
Solyc01g104160.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 1.1e-09 68.2 203 53.2
COL.COLO4_17865 Corchorus olitorius HOM05D003347 ORTHO05D003821 1.5e-09 67.8 148 56.1
Psat5g058080 Pisum sativum HOM05D003347 ORTHO05D003821 1.5e-09 67.8 132 40.9
FAN19G3034 Fragaria x ananassa HOM05D003347 ORTHO05D003821 2.6e-09 67.0 173 54.9
Glyma.15G046600 Glycine max HOM05D003347 ORTHO05D003821 4.4e-09 66.2 282 50.0
CDE06G0340 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 7.5e-09 65.5 129 55.0
Pp3c9_6610 Physcomitrium patens HOM05D003347 ORTHO05D003821 9.7e-09 65.1 182 51.1
Prupe.4G280500 Prunus persica HOM05D003347 ORTHO05D003821 9.7e-09 65.1 187 53.5
Actinidia06603 Actinidia chinensis HOM05D003347 ORTHO05D003821 3.7e-08 63.2 263 54.4
Psat5g058160 Pisum sativum HOM05D003347 ORTHO05D003821 6.3e-08 62.4 105 44.8
Sp1g09610 Schrenkiella parvula HOM05D003347 ORTHO05D003821 8.2e-08 62.0 246 52.0
Sabra01G0163000 Salix brachista HOM05D003347 ORTHO05D003821 1.1e-07 61.6 163 60.1
THA.LOC104819474 Tarenaya hassleriana HOM05D012923 ORTHO05D014747 1.8e-07 60.8 89 57.3
SEGI_27842 Sequoiadendron giganteum HOM05D003347 ORTHO05D003821 2.4e-07 60.5 167 58.7
arahy.Tifrunner.gnm1.ann1.X7GISI Arachis hypogaea HOM05D003347 ORTHO05D003821 3.1e-07 60.1 77 53.2
AUR62000566 Chenopodium quinoa HOM05D003347 ORTHO05D003821 7.0e-07 58.9 110 60.9
FvH4_1g25270 Fragaria vesca HOM05D003347 ORTHO05D003821 2.0e-06 57.4 173 50.9
AagrBONN_evm.TU.Sc2ySwM_228.2461 Anthoceros agrestis HOM05D003347 ORTHO05D003821 2.7e-06 57.0 163 55.2
Aa31LG11G7390 Aethionema arabicum HOM05D012923 ORTHO05D014747 3.5e-06 56.6 194 43.8
Lj4A831G76 Lonicera japonica HOM05D003347 ORTHO05D003821 5.9e-06 55.8 73 74.0
unitig_26.g9555 Utricularia gibba HOM05D003347 ORTHO05D003821 5.9e-06 55.8 273 42.9


User provided reference genes

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