Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 7.1e-184 647.1 326 100.0
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 1.3e-172 609.8 326 94.8
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 5.6e-96 355.1 284 64.8
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 7.3e-96 354.8 284 64.8
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 9.5e-96 354.4 334 58.4
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 4.7e-95 352.1 265 67.2
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 5.2e-94 348.6 334 58.1
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 2.6e-93 346.3 338 56.8
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 1.7e-92 343.6 279 63.8
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 2.2e-92 343.2 332 58.1
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 6.4e-92 341.7 248 65.3
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 1.1e-91 340.9 328 57.6
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 1.4e-91 340.5 302 60.6
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 3.2e-91 339.3 257 64.6
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 4.1e-91 339.0 241 69.7
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 1.6e-90 337.0 329 54.4
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 2.1e-90 336.7 266 63.2
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 3.9e-89 332.4 240 67.5
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.1e-88 330.9 229 71.6
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.1e-88 330.9 331 58.0
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.9e-88 330.1 280 62.5
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 4.3e-88 328.9 335 55.2
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 9.5e-88 327.8 239 64.9
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 1.2e-87 327.4 282 59.9
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 1.6e-87 327.0 333 57.1
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 1.6e-87 327.0 324 54.0
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 3.6e-87 325.9 236 65.7
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 4.7e-87 325.5 240 66.7
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 6.2e-87 325.1 251 63.3
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 6.2e-87 325.1 251 63.3
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 6.2e-87 325.1 288 58.3
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 8.1e-87 324.7 251 62.9
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 8.1e-87 324.7 262 59.9
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 8.1e-87 324.7 246 64.6
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 1.1e-86 324.3 325 56.0
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 1.1e-86 324.3 256 61.7
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 1.4e-86 323.9 241 66.4
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.8e-86 323.6 268 63.1
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 1.8e-86 323.6 278 59.0
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 2.4e-86 323.2 261 60.5
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 4.0e-86 322.4 268 62.7
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 6.8e-86 321.6 334 53.9
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 8.9e-86 321.2 236 64.4
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 8.9e-86 321.2 236 64.4
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 1.5e-85 320.5 329 55.0
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 2.0e-85 320.1 324 52.2
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 2.6e-85 319.7 329 52.6
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.6e-85 319.7 236 64.4
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 3.4e-85 319.3 327 54.4
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 4.4e-85 318.9 232 61.6
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 9.9e-85 317.8 245 65.3
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 1.7e-84 317.0 251 61.4
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 2.2e-84 316.6 254 61.8
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.2e-84 316.6 236 63.6
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 2.9e-84 316.2 283 56.9
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 2.9e-84 316.2 252 63.5
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 3.8e-84 315.8 333 52.3
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 4.9e-84 315.5 251 61.8
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 6.4e-84 315.1 330 54.8
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 6.4e-84 315.1 260 60.4
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 6.4e-84 315.1 296 55.7
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 8.4e-84 314.7 334 49.4
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 1.4e-83 313.9 262 59.5
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 1.4e-83 313.9 271 59.0
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 1.9e-83 313.5 252 61.1
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 1.9e-83 313.5 329 51.1
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 4.1e-83 312.4 331 51.7
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 4.1e-83 312.4 319 53.6
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 5.4e-83 312.0 329 54.1
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 7.1e-83 311.6 254 60.6
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 1.2e-82 310.8 257 60.7
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 2.7e-82 309.7 289 56.7
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 4.6e-82 308.9 235 64.3
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 6.0e-82 308.5 298 55.0
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 7.8e-82 308.1 253 62.1
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 7.8e-82 308.1 259 59.1
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 1.0e-81 307.8 255 61.2
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 1.3e-81 307.4 251 60.6
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 3.0e-81 306.2 332 50.9
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 4.3e-80 302.4 218 66.1
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 4.3e-80 302.4 270 55.9
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 4.3e-80 302.4 270 55.9
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 7.3e-80 301.6 251 59.0
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 2.8e-79 299.7 242 59.9
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 2.8e-79 299.7 337 50.4
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 2.8e-79 299.7 337 50.4
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 1.1e-78 297.7 319 51.1
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.4e-78 296.6 216 64.8
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 2.4e-78 296.6 244 58.2
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 4.2e-75 285.8 240 57.9
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 9.3e-75 284.6 306 52.6
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 2.1e-74 283.5 268 53.4
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 9.6e-72 274.6 330 48.8
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 9.6e-72 274.6 228 57.5
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 1.6e-71 273.9 249 55.8
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 1.3e-68 264.2 389 41.6
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 1.7e-68 263.8 332 48.5
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 1.2e-66 257.7 306 49.3
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 9.9e-61 238.0 236 50.0
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 9.6e-56 221.5 206 59.7
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 1.6e-55 220.7 167 62.3
AUR62015202 Chenopodium quinoa HOM05D006509 ORTHO05D008144 6.2e-55 218.8 160 65.6
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 1.2e-53 214.5 241 47.3
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 1.4e-51 207.6 240 49.2
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 2.5e-51 206.8 240 48.3
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.1e-48 198.0 138 67.4
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 1.5e-48 197.6 146 67.8
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 1.4e-46 191.0 253 40.3
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 2.4e-46 190.3 240 41.7
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 4.5e-45 186.0 145 64.1
Mapoly0002s0264 Marchantia polymorpha HOM05D006509 ORTHO05D008144 2.2e-44 183.7 249 39.4
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 5.5e-43 179.1 146 61.6
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 1.2e-42 177.9 158 53.2
FAN10G0955 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.3e-39 167.9 178 50.6
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 2.4e-38 163.7 152 52.6
ECA246G0117 Erigeron canadensis HOM05D006509 ORTHO05D008144 1.0e-36 158.3 96 76.0
AUR62018171 Chenopodium quinoa HOM05D006509 ORTHO05D008144 2.1e-34 150.6 112 63.4
Cpa.g.sc63.3 Carica papaya HOM05D006509 ORTHO05D008144 2.3e-33 147.1 145 53.1
Cc00_g35200 Coffea canephora HOM05D006509 ORTHO05D008144 8.2e-31 138.7 127 56.7
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 4.1e-30 136.3 141 46.1
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 2.2e-28 130.6 111 62.2
AagrBONN_evm.TU.Sc2ySwM_362.2130 Anthoceros agrestis HOM05D006509 ORTHO05D008144 1.1e-22 111.7 230 32.6
FAN01G0805 Fragaria x ananassa HOM05D006509 ORTHO05D008144 5.2e-17 92.8 64 67.2
Oeu033605.1 Olea europaea HOM05D006509 ORTHO05D008144 2.7e-13 80.5 77 54.5
Ca_19971_v3 Cicer arietinum L. HOM05D000020 ORTHO05D000156 5.9e-13 79.3 81 55.6


User provided reference genes

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