Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3521 Papaver somniferum HOM05D005998 ORTHO05D007664 3.8e-208 728.0 389 100.0
HanXRQChr10g0281201 Helianthus annuus HOM05D005998 ORTHO05D007664 4.1e-69 266.2 367 46.6
PSO541G3130 Papaver somniferum HOM05D005998 ORTHO05D007664 1.3e-67 261.2 344 52.0
PSO017G0196 Papaver somniferum HOM05D005998 ORTHO05D007664 7.9e-65 251.9 317 52.4
Lj2A1109T75 Lonicera japonica HOM05D005998 ORTHO05D007664 1.0e-64 251.5 345 51.3
ECA236G1847 Erigeron canadensis HOM05D005998 ORTHO05D007664 1.8e-64 250.8 363 40.2
PSO573G0007 Papaver somniferum HOM05D005998 ORTHO05D007664 3.0e-64 250.0 403 46.9
PSO675G7594 Papaver somniferum HOM05D005998 ORTHO05D007664 3.0e-64 250.0 320 53.4
PSO573G0021 Papaver somniferum HOM05D005998 ORTHO05D007664 5.1e-64 249.2 312 50.6
PSO017G6055 Papaver somniferum HOM05D005998 ORTHO05D007664 5.7e-63 245.7 408 45.3
CAN.G181.48 Capsicum annuum HOM05D005998 ORTHO05D007664 6.7e-56 222.2 366 45.4
PSO017G2023 Papaver somniferum HOM05D005998 ORTHO05D007664 6.7e-56 222.2 305 49.8
PSO675G8174 Papaver somniferum HOM05D005998 ORTHO05D007664 2.6e-55 220.3 317 51.7
Migut.N00691 Erythranthe guttata HOM05D005998 ORTHO05D007664 9.7e-55 218.4 366 45.6
TWI75G0247 Tripterygium wilfordii HOM05D005998 ORTHO05D007664 1.3e-54 218.0 319 49.2
QL09p045684 Quercus lobata HOM05D005998 ORTHO05D007664 2.8e-54 216.9 294 52.4
PSO573G0042 Papaver somniferum HOM05D005998 ORTHO05D007664 1.1e-53 214.9 330 49.1
Sc05g0001600 Simmondsia chinensis HOM05D005998 ORTHO05D007664 1.2e-52 211.5 339 38.9
PSO218G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 2.6e-52 210.3 314 50.0
PSO675G6053 Papaver somniferum HOM05D005998 ORTHO05D007664 2.6e-52 210.3 314 50.0
PSO340G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 1.7e-51 207.6 308 50.0
PSO675G6885 Papaver somniferum HOM05D005998 ORTHO05D007664 1.7e-51 207.6 308 50.0
COL.COLO4_29925 Corchorus olitorius HOM05D005998 ORTHO05D007664 5.5e-50 202.6 292 51.7
Gohir.D11G153100 Gossypium hirsutum HOM05D005998 ORTHO05D007664 1.2e-49 201.4 286 52.8
Gorai.007G162000 Gossypium raimondii HOM05D005998 ORTHO05D007664 1.2e-49 201.4 286 52.8
PSO017G0268 Papaver somniferum HOM05D005998 ORTHO05D007664 2.1e-49 200.7 461 38.4
Gohir.A11G144800 Gossypium hirsutum HOM05D005998 ORTHO05D007664 4.7e-49 199.5 286 52.8
Hma1.2p1_1756F.1_g301020 Hydrangea macrophylla HOM05D005998 ORTHO05D007664 3.0e-48 196.8 367 44.1
PSO017G5443 Papaver somniferum HOM05D005998 ORTHO05D007664 3.0e-48 196.8 251 57.4
AT3G07550 Arabidopsis thaliana HOM05D005998 ORTHO05D007664 5.2e-48 196.1 290 50.7
Thecc.01G205300 Theobroma cacao HOM05D005998 ORTHO05D007664 6.8e-48 195.7 293 51.2
PSO837G0060 Papaver somniferum HOM05D005998 ORTHO05D007664 1.2e-47 194.9 308 50.6
AL3G18890 Arabidopsis lyrata HOM05D005998 ORTHO05D007664 2.6e-47 193.7 290 51.0
TAR362G0769 Trochodendron aralioides HOM05D005998 ORTHO05D007664 5.7e-47 192.6 298 49.0
CANSAT25G0419 Cannabis sativa HOM05D005998 ORTHO05D007664 7.5e-47 192.2 289 47.1
Cfa010674 Carpinus fangiana HOM05D005998 ORTHO05D007664 7.5e-47 192.2 331 45.3
Prupe.8G184400 Prunus persica HOM05D005998 ORTHO05D007664 9.8e-47 191.8 304 49.0
Actinidia23131 Actinidia chinensis HOM05D005998 ORTHO05D007664 2.2e-46 190.7 293 50.2
PSO017G6716 Papaver somniferum HOM05D005998 ORTHO05D007664 2.2e-46 190.7 288 51.7
Cc02_g30680 Coffea canephora HOM05D005998 ORTHO05D007664 4.8e-46 189.5 310 45.5
PSO837G0015 Papaver somniferum HOM05D005998 ORTHO05D007664 6.3e-46 189.1 333 48.3
CSS0043446 Camellia sinensis var. sinensis HOM05D005998 ORTHO05D007664 1.1e-45 188.3 300 49.3
Carub.0003s0710 Capsella rubella HOM05D005998 ORTHO05D007664 1.4e-45 188.0 289 50.5
Thhalv10020882m.g Eutrema salsugineum HOM05D005998 ORTHO05D007664 1.4e-45 188.0 294 49.3
THA.LOC104819025 Tarenaya hassleriana HOM05D005998 ORTHO05D007664 1.8e-45 187.6 294 50.0
Sp3g06470 Schrenkiella parvula HOM05D005998 ORTHO05D007664 2.4e-45 187.2 290 49.3
Lsat_1_v5_gn_8_98580 Lactuca sativa HOM05D005998 ORTHO05D007664 3.1e-45 186.8 361 42.4
PGR083G1807 Punica granatum HOM05D005998 ORTHO05D007664 5.4e-45 186.0 292 49.3
PSO017G4719 Papaver somniferum HOM05D005998 ORTHO05D007664 7.0e-45 185.7 518 35.5
HPP92_024394 Vanilla planifolia HOM05D005998 ORTHO05D007664 7.0e-45 185.7 340 42.9
EL10Ac5g10571 Beta vulgaris HOM05D005998 ORTHO05D007664 9.1e-45 185.3 284 41.2
Atru.chr6.3489 Acer truncatum HOM05D005998 ORTHO05D007664 3.5e-44 183.3 298 48.0
PSO541G0922 Papaver somniferum HOM05D005998 ORTHO05D007664 7.7e-44 182.2 277 49.5
Peaxi162Scf00372g00061 Petunia axillaris HOM05D005998 ORTHO05D007664 1.7e-43 181.0 315 45.4
Aa31LG5G18090 Aethionema arabicum HOM05D005998 ORTHO05D007664 1.5e-42 177.9 289 47.4
PSO017G2859 Papaver somniferum HOM05D005998 ORTHO05D007664 1.6e-41 174.5 237 57.0
Haze_03601 Corylus avellana HOM05D005998 ORTHO05D007664 2.1e-41 174.1 355 33.5
BcaC05g29548 Brassica carinata HOM05D005998 ORTHO05D007664 6.1e-41 172.6 291 47.1
HanXRQChr08g0231281 Helianthus annuus HOM05D005998 ORTHO05D007664 8.0e-41 172.2 315 43.2
RcHm_v2.0_Chr6g0281791 Rosa chinensis HOM05D005998 ORTHO05D007664 8.0e-41 172.2 295 46.4
PGSC0003DMG400020641 Solanum tuberosum HOM05D005998 ORTHO05D007664 1.0e-40 171.8 307 45.9
PSO017G7250 Papaver somniferum HOM05D005998 ORTHO05D007664 1.8e-40 171.0 269 52.8
BraA05t22797Z Brassica rapa HOM05D005998 ORTHO05D007664 2.0e-39 167.5 294 37.4
HanXRQChr08g0231291 Helianthus annuus HOM05D005998 ORTHO05D007664 2.0e-39 167.5 298 45.6
HanXRQChr08g0231301 Helianthus annuus HOM05D005998 ORTHO05D007664 2.0e-39 167.5 298 45.6
Solyc06g007680.1 Solanum lycopersicum HOM05D005998 ORTHO05D007664 2.6e-39 167.2 307 44.6
Sopen06g002580 Solanum pennellii HOM05D005998 ORTHO05D007664 2.6e-39 167.2 307 45.0
Ciclev10015543m.g Citrus clementina HOM05D005998 ORTHO05D007664 3.4e-39 166.8 292 46.9
Manes.13G057500 Manihot esculenta HOM05D005998 ORTHO05D007664 5.7e-39 166.0 294 44.9
Nitab4.5_0003952g0080 Nicotiana tabacum HOM05D005998 ORTHO05D007664 5.7e-39 166.0 307 45.0
MD05G1151800 Malus domestica HOM05D005998 ORTHO05D007664 2.8e-38 163.7 293 44.7
Nitab4.5_0002641g0010 Nicotiana tabacum HOM05D005998 ORTHO05D007664 4.9e-38 162.9 310 44.2
BcaC05g29549 Brassica carinata HOM05D005998 ORTHO05D007664 6.3e-38 162.5 309 43.0
A05p40660 Brassica napus HOM05D005998 ORTHO05D007664 2.4e-37 160.6 294 37.1
Nn1g09548 Nelumbo nucifera HOM05D005998 ORTHO05D007664 2.7e-36 157.1 255 50.2
PSO017G6639 Papaver somniferum HOM05D005998 ORTHO05D007664 2.7e-36 157.1 164 51.8
PSO675G5104 Papaver somniferum HOM05D005998 ORTHO05D007664 3.5e-36 156.8 241 51.0
CARHR082230 Cardamine hirsuta HOM05D005998 ORTHO05D007664 4.5e-36 156.4 236 50.4
BolC5t34631H Brassica oleracea HOM05D005998 ORTHO05D007664 5.0e-35 152.9 299 43.1
Lsat_1_v5_gn_4_46380 Lactuca sativa HOM05D005998 ORTHO05D007664 5.0e-35 152.9 313 40.3
ECA247G2512 Erigeron canadensis HOM05D005998 ORTHO05D007664 6.6e-35 152.5 380 30.8
Eucgr.H00683 Eucalyptus grandis HOM05D005998 ORTHO05D007664 8.6e-35 152.1 298 43.6
C05p59770 Brassica napus HOM05D005998 ORTHO05D007664 1.5e-34 151.4 295 43.1
AUR62028626 Chenopodium quinoa HOM05D005998 ORTHO05D007664 3.3e-34 150.2 319 44.8
ECA247G3308 Erigeron canadensis HOM05D005998 ORTHO05D007664 3.3e-34 150.2 299 43.8
FvH4_2g17281 Fragaria vesca HOM05D005998 ORTHO05D007664 7.2e-34 149.1 293 45.7
AUR62008051 Chenopodium quinoa HOM05D005998 ORTHO05D007664 2.8e-33 147.1 306 44.8
Potri.017G056400 Populus trichocarpa HOM05D005998 ORTHO05D007664 4.7e-33 146.4 297 42.4
Sabra17G0050000 Salix brachista HOM05D005998 ORTHO05D007664 1.4e-32 144.8 298 41.9
Cpa.g.sc8.24 Carica papaya HOM05D005998 ORTHO05D007664 6.8e-32 142.5 281 34.2
Os11g0264200 Oryza sativa ssp. japonica HOM05D005998 ORTHO05D007664 2.0e-28 131.0 317 38.2
SEGI_17775 Sequoiadendron giganteum HOM05D005998 ORTHO05D007664 1.0e-27 128.6 309 38.2
Duzib211G0440 Durio zibethinus HOM05D005998 ORTHO05D007664 1.7e-27 127.9 219 49.3
PSO017G7319 Papaver somniferum HOM05D005998 ORTHO05D007664 3.9e-27 126.7 141 48.2
Sabra17G0048300 Salix brachista HOM05D005998 ORTHO05D007664 5.0e-27 126.3 272 42.3
ECA247G1983 Erigeron canadensis HOM05D005998 ORTHO05D007664 1.2e-25 121.7 325 31.4
RcHm_v2.0_Chr5g0064201 Rosa chinensis HOM05D005998 ORTHO05D007664 1.0e-24 118.6 200 44.0
PSO170G1012 Papaver somniferum HOM05D005998 ORTHO05D007664 3.1e-24 117.1 367 36.5
Glyma.07G060100 Glycine max HOM05D005998 ORTHO05D007664 8.9e-24 115.5 297 39.7
Medtr8g028140 Medicago truncatula HOM05D005998 ORTHO05D007664 8.9e-24 115.5 299 39.8
PSO017G3446 Papaver somniferum HOM05D005998 ORTHO05D007664 1.3e-22 111.7 218 35.3
PSO573G0016 Papaver somniferum HOM05D005998 ORTHO05D007664 1.3e-22 111.7 215 42.3
CDE08G0319 Ceratophyllum demersum HOM05D005998 ORTHO05D007664 3.7e-22 110.2 169 50.3
DCAR_000509 Daucus carota HOM05D005998 ORTHO05D007664 4.9e-22 109.8 171 52.6
Lj3g0009731 Lotus japonicus HOM05D005998 ORTHO05D007664 4.1e-21 106.7 297 37.7
Dinv28780 Davidia involucrata HOM05D005998 ORTHO05D003775 5.4e-21 106.3 106 49.1
TPR.G5126 Trifolium pratense HOM05D005998 ORTHO05D007664 2.7e-20 104.0 296 37.8
PSO017G0278 Papaver somniferum HOM05D000500 ORTHO05D007664 3.5e-20 103.6 168 37.5
Psat4g158400 Pisum sativum HOM05D005998 ORTHO05D007664 3.5e-20 103.6 294 38.1
Zm00001eb182340 Zea mays HOM05D005998 ORTHO05D015715 3.5e-20 103.6 168 35.7
PSO017G7049 Papaver somniferum HOM05D005998 ORTHO05D007664 1.0e-19 102.1 189 36.5
RcHm_v2.0_Chr7g0205731 Rosa chinensis HOM05D005998 ORTHO05D007664 1.0e-19 102.1 160 36.2
Ca_23566_v3 Cicer arietinum L. HOM05D005998 ORTHO05D007664 3.0e-19 100.5 290 37.6
ECA232G4734 Erigeron canadensis HOM05D005998 ORTHO05D007664 1.5e-18 98.2 379 32.5
ECA247G1593 Erigeron canadensis HOM05D005998 ORTHO05D007664 2.5e-18 97.4 297 26.9
PSO573G0035 Papaver somniferum HOM05D005998 ORTHO05D007664 2.1e-17 94.4 323 28.2
Rhsim13G0055600 Rhododendron simsii HOM05D005998 ORTHO05D007664 2.1e-17 94.4 250 31.6
Duzib138G0171 Durio zibethinus HOM05D005998 ORTHO05D007664 3.1e-16 90.5 106 44.3
ECA247G3549 Erigeron canadensis HOM05D005998 ORTHO05D007664 1.3e-14 85.1 319 34.8
PSO837G0002 Papaver somniferum HOM05D005998 ORTHO05D007664 2.9e-14 84.0 234 28.6
Zm00001eb112540 Zea mays HOM05D005998 ORTHO05D007664 6.4e-14 82.8 291 33.7
ATR0743G036 Amborella trichopoda HOM05D005998 ORTHO05D007664 1.1e-13 82.0 269 33.1
PSO017G5922 Papaver somniferum HOM05D005998 ORTHO05D007664 4.1e-13 80.1 172 41.9
Zm00001eb048880 Zea mays HOM05D005998 ORTHO05D015715 4.1e-13 80.1 115 39.1
MD10G1146000 Malus domestica HOM05D005998 ORTHO05D007664 1.6e-12 78.2 283 36.4
ECA247G2923 Erigeron canadensis HOM05D005998 ORTHO05D003386 2.7e-12 77.4 293 35.2
Ciclev10000831m.g Citrus clementina HOM05D001905 ORTHO05D001820 6.0e-12 76.3 357 25.5
Lj4C64T9 Lonicera japonica HOM05D001905 ORTHO05D001820 6.0e-12 76.3 357 23.8
Psat6g015040 Pisum sativum HOM05D001905 ORTHO05D001820 5.1e-11 73.2 384 23.2
QL12p041348 Quercus lobata HOM05D002813 ORTHO05D003203 8.6e-11 72.4 342 24.6
ECA247G1907 Erigeron canadensis HOM05D005998 ORTHO05D007664 2.5e-10 70.9 123 37.4
FAN27G0564 Fragaria x ananassa HOM05D001905 ORTHO05D001820 2.8e-09 67.4 365 23.6
Glyma.17G238700 Glycine max HOM05D001905 ORTHO05D001820 4.7e-09 66.6 362 24.0
Prupe.1G448200 Prunus persica HOM05D002813 ORTHO05D003203 6.2e-09 66.2 341 23.5
RcHm_v2.0_Chr5g0073471 Rosa chinensis HOM05D002813 ORTHO05D003203 2.3e-08 64.3 384 25.3
Mapoly0166s0007 Marchantia polymorpha HOM05D005998 ORTHO05D007664 3.1e-08 63.9 115 31.3
Atru.chr7.2088 Acer truncatum HOM05D002813 ORTHO05D003203 4.0e-08 63.5 348 21.8
QL12p041353 Quercus lobata HOM05D002813 ORTHO05D003203 4.0e-08 63.5 339 24.5
RcHm_v2.0_Chr6g0307031 Rosa chinensis HOM05D002813 ORTHO05D003203 4.0e-08 63.5 379 24.0
FAN15G3106 Fragaria x ananassa HOM05D001905 ORTHO05D001820 5.2e-08 63.2 365 23.3
Lsat_1_v5_gn_1_22481 Lactuca sativa HOM05D001905 ORTHO05D001820 6.8e-08 62.8 350 22.6
Potri.005G141800 Populus trichocarpa HOM05D001905 ORTHO05D001820 1.2e-07 62.0 365 24.1
FAN20G2298 Fragaria x ananassa HOM05D001905 ORTHO05D001820 1.5e-07 61.6 365 23.0
FvH4_2g33740 Fragaria vesca HOM05D001905 ORTHO05D001820 2.0e-07 61.2 363 22.9
Gohir.A01G121800 Gossypium hirsutum HOM05D001905 ORTHO05D001820 2.6e-07 60.8 361 23.3
Sed0015116 Sechium edule HOM05D001905 ORTHO05D001820 2.6e-07 60.8 363 23.7
Hma1.2p1_2354F.1_g320530 Hydrangea macrophylla HOM05D005998 ORTHO05D007664 3.4e-07 60.5 88 37.5
FAN24G0672 Fragaria x ananassa HOM05D001905 ORTHO05D001820 4.4e-07 60.1 363 22.9
Actinidia22657 Actinidia chinensis HOM05D001905 ORTHO05D001820 5.8e-07 59.7 364 21.7
Gohir.D05G048500 Gossypium hirsutum HOM05D002813 ORTHO05D003203 5.8e-07 59.7 331 22.1
Oeu064702.2 Olea europaea HOM05D005998 ORTHO05D007664 7.6e-07 59.3 64 43.8
DCAR_015355 Daucus carota HOM05D002125 ORTHO05D002105 1.3e-06 58.5 366 27.0
MD15G1093400 Malus domestica HOM05D002813 ORTHO05D003203 1.3e-06 58.5 335 24.2
SEGI_38001 Sequoiadendron giganteum HOM05D002125 ORTHO05D002105 1.3e-06 58.5 167 29.9
AL6G41300 Arabidopsis lyrata HOM05D001905 ORTHO05D001820 1.7e-06 58.2 360 22.8
THA.LOC104825763 Tarenaya hassleriana HOM05D001905 ORTHO05D001820 1.7e-06 58.2 364 20.6
PSO210G0464 Papaver somniferum HOM05D001905 ORTHO05D001820 2.2e-06 57.8 351 22.5
Gorai.009G049800 Gossypium raimondii HOM05D002813 ORTHO05D003203 3.7e-06 57.0 320 21.9
RcHm_v2.0_Chr6g0308811 Rosa chinensis HOM05D001905 ORTHO05D001820 3.7e-06 57.0 361 23.0
arahy.Tifrunner.gnm1.ann1.Q6K1JG Arachis hypogaea HOM05D002762 ORTHO05D004643 4.9e-06 56.6 300 25.7
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 4.9e-06 56.6 128 34.4
FAN16G2220 Fragaria x ananassa HOM05D002125 ORTHO05D002105 4.9e-06 56.6 216 37.5
Glyma.14G200300 Glycine max HOM05D002125 ORTHO05D002105 8.4e-06 55.8 215 27.4


User provided reference genes

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