Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G2384 Papaver somniferum HOM05D000782 ORTHO05D000571 1.2e-95 353.2 178 100.0
PSO170G6702 Papaver somniferum HOM05D000782 ORTHO05D000571 4.0e-80 301.6 193 83.9
TAR369G0987 Trochodendron aralioides HOM05D000782 ORTHO05D000571 9.0e-32 141.0 188 47.3
Haze_24431 Corylus avellana HOM05D000782 ORTHO05D000571 1.6e-28 130.2 185 45.9
QL04p095962 Quercus lobata HOM05D000782 ORTHO05D000571 4.6e-28 128.6 179 48.0
QL04p095983 Quercus lobata HOM05D000782 ORTHO05D000571 4.6e-28 128.6 179 48.0
QL01p025713 Quercus lobata HOM05D000782 ORTHO05D000571 6.1e-28 128.3 179 48.6
Actinidia32599 Actinidia chinensis HOM05D000782 ORTHO05D000571 1.0e-27 127.5 180 43.9
Sabra19G0130500 Salix brachista HOM05D000782 ORTHO05D000571 2.3e-27 126.3 181 45.9
Cc01_g15010 Coffea canephora HOM05D000782 ORTHO05D000571 5.1e-27 125.2 214 38.3
Duzib168G2101 Durio zibethinus HOM05D000782 ORTHO05D000571 5.1e-27 125.2 189 45.0
Hma1.2p1_1421F.1_g282460 Hydrangea macrophylla HOM05D000782 ORTHO05D000571 5.1e-27 125.2 177 46.9
Ciclev10002580m.g Citrus clementina HOM05D000782 ORTHO05D000571 6.7e-27 124.8 192 42.2
Manes.18G126600 Manihot esculenta HOM05D000782 ORTHO05D000571 1.5e-26 123.6 185 45.4
FvH4_3g39960 Fragaria vesca HOM05D000782 ORTHO05D000571 1.9e-26 123.2 189 43.9
MD11G1060400 Malus domestica HOM05D000782 ORTHO05D000571 1.9e-26 123.2 184 45.7
FAN16G3647 Fragaria x ananassa HOM05D000001 ORTHO05D012572 2.5e-26 122.9 199 43.2
Thecc.09G359700 Theobroma cacao HOM05D000782 ORTHO05D000571 2.5e-26 122.9 194 41.2
Rhsim13G0062600 Rhododendron simsii HOM05D000782 ORTHO05D000571 3.3e-26 122.5 178 43.3
FAN25G1963 Fragaria x ananassa HOM05D000001 ORTHO05D012572 4.3e-26 122.1 189 43.4
Nn2g11061 Nelumbo nucifera HOM05D000782 ORTHO05D000571 5.7e-26 121.7 185 44.9
CiPaw.14G053200 Carya illinoinensis HOM05D000782 ORTHO05D000571 7.4e-26 121.3 178 44.9
FAN21G0593 Fragaria x ananassa HOM05D000782 ORTHO05D000571 9.7e-26 120.9 189 43.4
Lj2A1095G46 Lonicera japonica HOM05D000782 ORTHO05D000571 9.7e-26 120.9 183 44.3
COL.COLO4_11173 Corchorus olitorius HOM05D000782 ORTHO05D000571 1.3e-25 120.6 178 45.5
Migut.N00751 Erythranthe guttata HOM05D000782 ORTHO05D000571 1.7e-25 120.2 196 39.3
CSS0014731 Camellia sinensis var. sinensis HOM05D001072 ORTHO05D006807 2.2e-25 119.8 164 46.3
vmacro02905 Vaccinium macrocarpon HOM05D000782 ORTHO05D000571 1.1e-24 117.5 180 43.9
RcHm_v2.0_Chr5g0071971 Rosa chinensis HOM05D000782 ORTHO05D000571 3.1e-24 115.9 189 43.4
GSVIVG01024611001 Vitis vinifera HOM05D000001 ORTHO05D012572 4.1e-24 115.5 189 41.3
Gohir.D03G143800 Gossypium hirsutum HOM05D000782 ORTHO05D000571 5.3e-24 115.2 184 42.9
HanXRQChr11g0339921 Helianthus annuus HOM05D000782 ORTHO05D000571 5.3e-24 115.2 186 41.9
Lsat_1_v5_gn_8_108720 Lactuca sativa HOM05D000782 ORTHO05D000571 5.3e-24 115.2 193 41.5
MD03G1058200 Malus domestica HOM05D000782 ORTHO05D000571 5.3e-24 115.2 188 43.6
Prupe.6G045600 Prunus persica HOM05D000782 ORTHO05D000571 5.3e-24 115.2 193 44.6
Gohir.D08G221000 Gossypium hirsutum HOM05D000782 ORTHO05D000571 9.1e-24 114.4 175 45.1
Gorai.004G234700 Gossypium raimondii HOM05D000782 ORTHO05D000571 9.1e-24 114.4 175 45.1
Atru.chr1.2094 Acer truncatum HOM05D000782 ORTHO05D000571 3.4e-23 112.5 194 39.2
ECA236G0449 Erigeron canadensis HOM05D000782 ORTHO05D000571 4.5e-23 112.1 194 40.2
Cpa.g.sc2.336 Carica papaya HOM05D000782 ORTHO05D000571 5.9e-23 111.7 176 41.5
Gorai.003G151100 Gossypium raimondii HOM05D000782 ORTHO05D000571 5.9e-23 111.7 184 42.4
MBI15_g20019_MAGBIO Magnolia biondii HOM05D000782 ORTHO05D000571 5.9e-23 111.7 199 37.7
Solyc06g082380.3 Solanum lycopersicum HOM05D000782 ORTHO05D000571 7.7e-23 111.3 190 41.1
Sabra19G0124100 Salix brachista HOM05D000782 ORTHO05D000571 1.7e-22 110.2 206 39.3
DCAR_023953 Daucus carota HOM05D000782 ORTHO05D000571 2.2e-22 109.8 207 35.3
CiPaw.13G067500 Carya illinoinensis HOM05D000782 ORTHO05D000571 5.0e-22 108.6 182 40.1
Sopen06g033770 Solanum pennellii HOM05D000782 ORTHO05D000571 5.0e-22 108.6 190 40.0
PGSC0003DMG400030460 Solanum tuberosum HOM05D000782 ORTHO05D000571 5.0e-22 108.6 193 39.9
SalBow2G3499 Salvia bowleyana HOM05D000782 ORTHO05D000571 8.5e-22 107.8 183 37.2
CAN.G1095.28 Capsicum annuum HOM05D000782 ORTHO05D000571 1.9e-21 106.7 186 39.8
Sed0021709 Sechium edule HOM05D000782 ORTHO05D000571 2.1e-20 103.2 193 36.8
Oeu050028.1 Olea europaea HOM05D000782 ORTHO05D000571 4.7e-20 102.1 185 38.4
Eucgr.K01367 Eucalyptus grandis HOM05D000782 ORTHO05D000571 6.1e-20 101.7 185 38.4
ClCG08G003160 Citrullus lanatus HOM05D000782 ORTHO05D000571 1.0e-19 100.9 179 37.4
CsaV3_7G022830 Cucumis sativus L. HOM05D000782 ORTHO05D000571 1.0e-19 100.9 179 38.0
Phvul.008G250800 Phaseolus vulgaris HOM05D000782 ORTHO05D000571 1.0e-19 100.9 185 38.9
THA.LOC104800764 Tarenaya hassleriana HOM05D000782 ORTHO05D000571 1.4e-19 100.5 177 38.4
Lalb_Chr10g0103661 Lupinus albus HOM05D000782 ORTHO05D000571 1.8e-19 100.1 177 40.1
TWI79G1409 Tripterygium wilfordii HOM05D000782 ORTHO05D000571 3.0e-19 99.4 205 38.0
MELO3C024977.2 Cucumis melo HOM05D000782 ORTHO05D000571 3.9e-19 99.0 190 36.8
Glyma.14G200600 Glycine max HOM05D000782 ORTHO05D000571 3.9e-19 99.0 185 37.3
Psat0s2794g0120 Pisum sativum HOM05D000782 ORTHO05D000571 3.9e-19 99.0 178 38.8
Medtr5g074550 Medicago truncatula HOM05D000782 ORTHO05D000571 8.8e-19 97.8 204 37.3
Ah.08g215420 Amaranthus hybridus HOM05D000782 ORTHO05D000571 2.0e-18 96.7 173 37.0
MSTRG.12694 Avicennia marina HOM05D000782 ORTHO05D000571 3.3e-18 95.9 189 36.0
TAR623G0287 Trochodendron aralioides HOM05D000782 ORTHO05D000571 3.3e-18 95.9 150 43.3
TAR623G1242 Trochodendron aralioides HOM05D000782 ORTHO05D000571 3.3e-18 95.9 146 43.8
Carub.0004s1143 Capsella rubella HOM05D000782 ORTHO05D000571 5.7e-18 95.1 172 39.0
CARHR123590 Cardamine hirsuta HOM05D000782 ORTHO05D000571 7.4e-18 94.7 165 38.2
Sp4g12850 Schrenkiella parvula HOM05D000782 ORTHO05D000571 7.4e-18 94.7 172 39.0
ClCG03G000180 Citrullus lanatus HOM05D000782 ORTHO05D000571 9.7e-18 94.4 113 48.7
TPR.G25342 Trifolium pratense HOM05D000782 ORTHO05D000571 1.7e-17 93.6 186 37.6
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 2.8e-17 92.8 145 40.0
EL10Ac7g15871 Beta vulgaris HOM05D000782 ORTHO05D000571 2.8e-17 92.8 185 36.8
AL4G25120 Arabidopsis lyrata HOM05D000782 ORTHO05D000571 4.8e-17 92.0 173 36.4
AT2G30270 Arabidopsis thaliana HOM05D000782 ORTHO05D000571 4.8e-17 92.0 173 35.3
Aa31LG5G6450 Aethionema arabicum HOM05D002411 ORTHO05D002564 6.3e-17 91.7 172 38.4
AUR62009715 Chenopodium quinoa HOM05D000782 ORTHO05D000571 6.3e-17 91.7 206 35.9
VMungo0647G1733 Vigna mungo HOM05D000782 ORTHO05D000571 8.2e-17 91.3 185 37.8
LjContig00141g0026997 Lotus japonicus HOM05D000782 ORTHO05D000571 1.1e-16 90.9 178 36.5
Medtr5g074560 Medicago truncatula HOM05D000782 ORTHO05D000571 1.4e-16 90.5 172 37.2
A03p16910 Brassica napus HOM05D000782 ORTHO05D000571 1.8e-16 90.1 173 35.3
BraA03t10980Z Brassica rapa HOM05D000782 ORTHO05D000571 1.8e-16 90.1 173 35.3
BcaC01g06019 Brassica carinata HOM05D000782 ORTHO05D000571 1.2e-15 87.4 172 34.3
Thhalv10017277m.g Eutrema salsugineum HOM05D000782 ORTHO05D000571 1.2e-15 87.4 173 35.8
C03p19910 Brassica napus HOM05D000782 ORTHO05D000571 2.0e-15 86.7 172 34.3
BolC3t14370H Brassica oleracea HOM05D000782 ORTHO05D000571 2.0e-15 86.7 172 34.3
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 2.0e-15 86.7 172 34.9
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 4.5e-15 85.5 188 36.7
CSS0016607 Camellia sinensis var. sinensis HOM05D000782 ORTHO05D000571 1.0e-14 84.3 76 57.9
ATR0681G158 Amborella trichopoda HOM05D000782 ORTHO05D000571 1.3e-14 84.0 208 34.6
arahy.Tifrunner.gnm1.ann1.NRMQ9K Arachis hypogaea HOM05D000782 ORTHO05D000571 1.7e-14 83.6 177 34.5
Dinv12248 Davidia involucrata HOM05D000782 ORTHO05D000571 2.2e-14 83.2 157 40.1
Potri.019G126300 Populus trichocarpa HOM05D000782 ORTHO05D000571 8.5e-14 81.3 182 37.9
Oeu050030.1 Olea europaea HOM05D000782 ORTHO05D000571 1.1e-13 80.9 63 61.9
Aqoxy3G02343 Aquilegia oxysepala HOM05D000782 ORTHO05D000571 3.2e-13 79.3 195 33.8
Zm00001eb286650 Zea mays HOM05D000782 ORTHO05D000571 3.2e-13 79.3 176 33.5
Gohir.A03G024700 Gossypium hirsutum HOM05D000782 ORTHO05D000571 4.7e-12 75.5 147 38.1
Gohir.A08G203700 Gossypium hirsutum HOM05D000782 ORTHO05D000571 1.8e-11 73.6 137 41.6
FvH4_6g10350 Fragaria vesca HOM05D000782 ORTHO05D000571 3.0e-11 72.8 182 34.6
FAN09G0140 Fragaria x ananassa HOM05D000782 ORTHO05D000571 3.0e-11 72.8 182 34.6
FAN14G2230 Fragaria x ananassa HOM05D000782 ORTHO05D000571 3.0e-11 72.8 182 34.6
MD17G1185800 Malus domestica HOM05D000782 ORTHO05D000571 3.0e-11 72.8 147 38.1
RcHm_v2.0_Chr3g0461181 Rosa chinensis HOM05D000782 ORTHO05D000571 3.9e-11 72.4 180 35.0
DCAR_028900 Daucus carota HOM05D000782 ORTHO05D000571 5.2e-11 72.0 182 32.4
DCAR_028905 Daucus carota HOM05D000782 ORTHO05D000571 8.8e-11 71.2 181 32.6
PSO063G6132 Papaver somniferum HOM05D000295 ORTHO05D031524 8.8e-11 71.2 42 85.7
FAN05G0058 Fragaria x ananassa HOM05D000782 ORTHO05D000571 1.1e-10 70.9 182 34.1
FAN05G5695 Fragaria x ananassa HOM05D000782 ORTHO05D000571 1.1e-10 70.9 182 34.1
PSO700G0297 Papaver somniferum HOM05D000295 ORTHO05D031524 1.1e-10 70.9 42 88.1
Medtr7g072140 Medicago truncatula HOM05D000782 ORTHO05D000571 1.5e-10 70.5 200 32.5
DCAR_028903 Daucus carota HOM05D000782 ORTHO05D000571 2.0e-10 70.1 181 33.1
SHI19227 Sapria himalayana HOM05D000782 ORTHO05D000571 2.0e-10 70.1 89 46.1
Lj3A943G21 Lonicera japonica HOM05D000782 ORTHO05D000571 2.6e-10 69.7 110 41.8
Prupe.6G287500 Prunus persica HOM05D000782 ORTHO05D000571 3.3e-10 69.3 181 33.1
Os05g0339200 Oryza sativa ssp. japonica HOM05D000782 ORTHO05D000571 4.4e-10 68.9 177 30.5
VMungo0925G0001 Vigna mungo HOM05D000782 ORTHO05D000571 7.4e-10 68.2 193 32.1
CANSAT35G0618 Cannabis sativa HOM05D000782 ORTHO05D000571 9.7e-10 67.8 196 30.6
FvH4_6g10370 Fragaria vesca HOM05D000782 ORTHO05D000571 9.7e-10 67.8 194 31.4
Ca_07723_v3 Cicer arietinum L. HOM05D000782 ORTHO05D000571 1.3e-09 67.4 191 31.9
FAN14G3537 Fragaria x ananassa HOM05D000782 ORTHO05D000571 1.3e-09 67.4 194 31.4
Cc06_g00620 Coffea canephora HOM05D000782 ORTHO05D000571 1.7e-09 67.0 194 32.5
Medtr7g072170 Medicago truncatula HOM05D000782 ORTHO05D000571 1.7e-09 67.0 193 33.2
Actinidia29055 Actinidia chinensis HOM05D000782 ORTHO05D000571 2.8e-09 66.2 195 31.3
Nitab4.5_0000381g0020 Nicotiana tabacum HOM05D000782 ORTHO05D000571 3.7e-09 65.9 167 31.1
Prupe.6G287600 Prunus persica HOM05D000782 ORTHO05D000571 3.7e-09 65.9 195 31.3
Lj1g0027513 Lotus japonicus HOM05D000782 ORTHO05D000571 4.8e-09 65.5 193 31.1
Hma1.2p1_0174F.1_g077070 Hydrangea macrophylla HOM05D000782 ORTHO05D000571 6.3e-09 65.1 197 31.0
TPR.G35292 Trifolium pratense HOM05D000782 ORTHO05D000571 6.3e-09 65.1 191 32.5
Aqoxy4G02166 Aquilegia oxysepala HOM05D000782 ORTHO05D000571 8.2e-09 64.7 154 30.5
DCAR_015455 Daucus carota HOM05D000782 ORTHO05D000571 8.2e-09 64.7 180 32.2
DCAR_028904 Daucus carota HOM05D000782 ORTHO05D000571 8.2e-09 64.7 180 31.7
Duzib268G0853 Durio zibethinus HOM05D000782 ORTHO05D000571 1.1e-08 64.3 203 31.5
Lsat_1_v5_gn_9_38141 Lactuca sativa HOM05D000782 ORTHO05D000571 1.1e-08 64.3 198 30.3
Medtr7g072270 Medicago truncatula HOM05D000782 ORTHO05D000571 1.1e-08 64.3 199 30.2
MD12G1182900 Malus domestica HOM05D000782 ORTHO05D000571 1.4e-08 63.9 181 32.6
SalBow5G2396 Salvia bowleyana HOM05D000782 ORTHO05D000571 1.4e-08 63.9 200 29.0
SEGI_32147 Sequoiadendron giganteum HOM05D000782 ORTHO05D000571 1.4e-08 63.9 180 31.7
Lalb_Chr03g0043661 Lupinus albus HOM05D000782 ORTHO05D000571 1.8e-08 63.5 183 30.6
RcHm_v2.0_Chr3g0461221 Rosa chinensis HOM05D000782 ORTHO05D000571 1.8e-08 63.5 200 30.5
ECA247G3886 Erigeron canadensis HOM05D000782 ORTHO05D000571 2.4e-08 63.2 184 29.9
Aqoxy4G02163 Aquilegia oxysepala HOM05D000782 ORTHO05D000571 4.1e-08 62.4 183 30.6
SEGI_07804 Sequoiadendron giganteum HOM05D000782 ORTHO05D000571 4.1e-08 62.4 176 31.2
vmacro20342 Vaccinium macrocarpon HOM05D000782 ORTHO05D000571 4.1e-08 62.4 183 29.0
CSS0042997 Camellia sinensis var. sinensis HOM05D000782 ORTHO05D000571 5.3e-08 62.0 196 30.6
Ciclev10013687m.g Citrus clementina HOM05D000782 ORTHO05D000571 7.0e-08 61.6 184 32.6
MD12G1183400 Malus domestica HOM05D000782 ORTHO05D000571 7.0e-08 61.6 180 31.1
Phvul.010G061200 Phaseolus vulgaris HOM05D000782 ORTHO05D000571 7.0e-08 61.6 195 30.8
CAN.G738.2 Capsicum annuum HOM05D000782 ORTHO05D000571 1.2e-07 60.8 197 29.9
Migut.J00076 Erythranthe guttata HOM05D000782 ORTHO05D000571 1.2e-07 60.8 180 30.0
Rhsim05G0227600 Rhododendron simsii HOM05D000782 ORTHO05D000571 1.2e-07 60.8 192 28.6
CDE06G0912 Ceratophyllum demersum HOM05D000782 ORTHO05D000571 1.6e-07 60.5 180 31.7
SEGI_38654 Sequoiadendron giganteum HOM05D000782 ORTHO05D000571 1.6e-07 60.5 179 29.6
GSVIVG01030235001 Vitis vinifera HOM05D000782 ORTHO05D000571 1.6e-07 60.5 178 31.5
MD12G1183000 Malus domestica HOM05D000782 ORTHO05D000571 2.0e-07 60.1 195 28.7
Rhsim05G0227900 Rhododendron simsii HOM05D000782 ORTHO05D000571 2.0e-07 60.1 197 30.5
vmacro20341 Vaccinium macrocarpon HOM05D000782 ORTHO05D000571 2.0e-07 60.1 193 29.5
Ca_05681_v3 Cicer arietinum L. HOM05D000782 ORTHO05D000571 2.6e-07 59.7 147 31.3
Nn2g11070 Nelumbo nucifera HOM05D000782 ORTHO05D000571 2.6e-07 59.7 180 31.7
PSO017G2627 Papaver somniferum HOM05D000782 ORTHO05D000571 2.6e-07 59.7 183 30.6
CDE06G2424 Ceratophyllum demersum HOM05D000782 ORTHO05D000571 3.5e-07 59.3 182 31.9
PSO170G5746 Papaver somniferum HOM05D000782 ORTHO05D000571 3.5e-07 59.3 194 30.4
RcHm_v2.0_Chr3g0461231 Rosa chinensis HOM05D000782 ORTHO05D000571 3.5e-07 59.3 195 28.2
HPP92_001136 Vanilla planifolia HOM05D000782 ORTHO05D000571 3.5e-07 59.3 148 31.1
CAN.G738.4 Capsicum annuum HOM05D000782 ORTHO05D000571 4.5e-07 58.9 197 29.4
Nitab4.5_0004057g0010 Nicotiana tabacum HOM05D000782 ORTHO05D000571 4.5e-07 58.9 183 29.0
Aa31LG1G23390 Aethionema arabicum HOM05D000782 ORTHO05D000571 5.9e-07 58.5 184 28.3
Manes.09G114200 Manihot esculenta HOM05D000782 ORTHO05D000571 5.9e-07 58.5 200 29.5
Manes.10G008300 Manihot esculenta HOM05D000782 ORTHO05D000571 5.9e-07 58.5 179 28.5
Peaxi162Scf00009g00812 Petunia axillaris HOM05D000782 ORTHO05D000571 5.9e-07 58.5 205 30.2
BcaB01g06251 Brassica carinata HOM05D000782 ORTHO05D000571 7.7e-07 58.2 180 30.0
Actinidia29056 Actinidia chinensis HOM05D000782 ORTHO05D000571 1.0e-06 57.8 193 30.1
BcaB01g06118 Brassica carinata HOM05D000782 ORTHO05D000571 1.0e-06 57.8 185 30.3
C03p00260 Brassica napus HOM05D000782 ORTHO05D000571 1.0e-06 57.8 185 30.3
BolC3t12602H Brassica oleracea HOM05D000782 ORTHO05D000571 1.0e-06 57.8 185 30.3
BraA03t09400Z Brassica rapa HOM05D000782 ORTHO05D000571 1.3e-06 57.4 187 29.9
THA.LOC104823312 Tarenaya hassleriana HOM05D000782 ORTHO05D000571 1.3e-06 57.4 185 29.2
Cpa.g.sc49.69 Carica papaya HOM05D000782 ORTHO05D000571 1.7e-06 57.0 195 27.7
QL07p033303 Quercus lobata HOM05D000782 ORTHO05D000571 1.7e-06 57.0 193 30.6
Cpa.g.sc1160.1 Carica papaya HOM05D000782 ORTHO05D000571 2.2e-06 56.6 197 29.4
PSO170G1081 Papaver somniferum HOM05D000782 ORTHO05D000571 2.2e-06 56.6 197 28.9
Glyma.03G040900 Glycine max HOM05D000782 ORTHO05D000571 2.9e-06 56.2 190 30.5
Lj2A64T52 Lonicera japonica HOM05D000782 ORTHO05D000571 2.9e-06 56.2 191 29.8
Nitab4.5_0002768g0070 Nicotiana tabacum HOM05D000782 ORTHO05D000571 2.9e-06 56.2 168 31.0
A03p00110 Brassica napus HOM05D000782 ORTHO05D000571 5.0e-06 55.5 185 29.7
SGA_v2.0_scaffold373G50167 Striga asiatica HOM05D000782 ORTHO05D000571 5.0e-06 55.5 180 31.7
Glyma.01G129000 Glycine max HOM05D000782 ORTHO05D000571 6.5e-06 55.1 193 29.0
Prupe.6G287800 Prunus persica HOM05D000782 ORTHO05D000571 6.5e-06 55.1 195 29.2


User provided reference genes

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