Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G1526 Papaver somniferum HOM05D005594 ORTHO05D006403 6.5e-79 297.4 154 100.0
PSO675G6381 Papaver somniferum HOM05D005594 ORTHO05D006403 2.1e-37 159.5 114 76.3
PSO541G2296 Papaver somniferum HOM05D005594 ORTHO05D006403 2.3e-36 156.0 114 74.6
PSO381G0016 Papaver somniferum HOM05D005594 ORTHO05D006403 9.9e-35 150.6 152 62.5
PSO640G0001 Papaver somniferum HOM05D005594 ORTHO05D006403 9.9e-35 150.6 152 62.5
PSO229G0121 Papaver somniferum HOM05D005594 ORTHO05D006403 2.2e-34 149.4 152 61.8
PSO170G0052 Papaver somniferum HOM05D005594 ORTHO05D006403 1.9e-33 146.4 106 76.4
Ciclev10001834m.g Citrus clementina HOM05D005594 ORTHO05D006403 2.3e-23 112.8 143 48.3
CSS0014517 Camellia sinensis var. sinensis HOM05D005594 ORTHO05D006403 3.0e-23 112.5 110 51.8
Dinv42597 Davidia involucrata HOM05D005594 ORTHO05D006403 3.0e-23 112.5 109 54.1
CSS0029582 Camellia sinensis var. sinensis HOM05D005594 ORTHO05D006403 1.9e-22 109.8 106 52.8
GSVIVG01026918001 Vitis vinifera HOM05D005594 ORTHO05D006403 1.9e-22 109.8 145 46.2
TAR625G0360 Trochodendron aralioides HOM05D005594 ORTHO05D006403 2.5e-22 109.4 131 47.3
GSVIVG01009200001 Vitis vinifera HOM05D005594 ORTHO05D006403 2.5e-22 109.4 144 45.1
TAR381G1609 Trochodendron aralioides HOM05D005594 ORTHO05D006403 3.3e-22 109.0 126 49.2
Actinidia19620 Actinidia chinensis HOM05D005594 ORTHO05D006403 4.3e-22 108.6 106 53.8
HanXRQChr09g0253981 Helianthus annuus HOM05D005594 ORTHO05D006403 5.3e-20 101.7 156 41.0
Nitab4.5_0000131g0040 Nicotiana tabacum HOM05D005594 ORTHO05D006403 5.3e-20 101.7 152 41.4
Nitab4.5_0009755g0010 Nicotiana tabacum HOM05D005594 ORTHO05D006403 9.0e-20 100.9 127 46.5
CiPaw.01G111900 Carya illinoinensis HOM05D005594 ORTHO05D006403 1.2e-19 100.5 128 43.8
vmacro21357 Vaccinium macrocarpon HOM05D005594 ORTHO05D006403 1.2e-19 100.5 106 49.1
Duzib093G1195 Durio zibethinus HOM05D005594 ORTHO05D006403 2.0e-19 99.8 141 41.8
CiPaw.07G163500 Carya illinoinensis HOM05D005594 ORTHO05D006403 3.4e-19 99.0 127 44.1
Atru.chr13.987 Acer truncatum HOM05D005594 ORTHO05D006403 4.4e-19 98.6 108 50.0
Lsat_1_v5_gn_3_110060 Lactuca sativa HOM05D005594 ORTHO05D006403 4.4e-19 98.6 137 40.9
PGR042G0833 Punica granatum HOM05D005594 ORTHO05D006403 4.4e-19 98.6 143 43.4
SEGI_07360 Sequoiadendron giganteum HOM05D005594 ORTHO05D006403 5.8e-19 98.2 107 46.7
SGA_v2.0_scaffold62G21352 Striga asiatica HOM05D000582 ORTHO05D006403 5.8e-19 98.2 107 48.6
COL.COLO4_35271 Corchorus olitorius HOM05D005594 ORTHO05D006403 7.6e-19 97.8 107 46.7
Gohir.D05G221400 Gossypium hirsutum HOM05D005594 ORTHO05D006403 7.6e-19 97.8 141 41.8
Gorai.009G228600 Gossypium raimondii HOM05D005594 ORTHO05D006403 7.6e-19 97.8 141 41.8
MBI16_g06011_MAGBIO Magnolia biondii HOM05D005594 ORTHO05D006403 7.6e-19 97.8 142 40.8
Thecc.08G073300 Theobroma cacao HOM05D005594 ORTHO05D006403 7.6e-19 97.8 106 49.1
TWI31G0793 Tripterygium wilfordii HOM05D005594 ORTHO05D006403 7.6e-19 97.8 107 52.3
CAN.G193.4 Capsicum annuum HOM05D005594 ORTHO05D006403 9.9e-19 97.4 109 49.5
PGSC0003DMG400008701 Solanum tuberosum HOM05D005594 ORTHO05D006403 9.9e-19 97.4 144 44.4
Eucgr.F02158 Eucalyptus grandis HOM05D005594 ORTHO05D006403 2.2e-18 96.3 144 40.3
Gohir.A05G218700 Gossypium hirsutum HOM05D005594 ORTHO05D006403 2.9e-18 95.9 141 41.1
CANSAT35G1072 Cannabis sativa HOM05D005594 ORTHO05D006403 3.8e-18 95.5 144 42.4
SGA_v2.0_scaffold13G06499 Striga asiatica HOM05D005594 ORTHO05D006403 3.8e-18 95.5 108 48.1
Nn1g05624 Nelumbo nucifera HOM05D005594 ORTHO05D006403 4.9e-18 95.1 142 41.5
Oeu040880.1 Olea europaea HOM05D005594 ORTHO05D006403 4.9e-18 95.1 141 42.6
QL09p018366 Quercus lobata HOM05D005594 ORTHO05D006403 4.9e-18 95.1 128 43.0
Sopen04g030280 Solanum pennellii HOM05D005594 ORTHO05D006403 4.9e-18 95.1 144 43.8
SalBow3G3026 Salvia bowleyana HOM05D005594 ORTHO05D006403 8.4e-18 94.4 138 42.0
Solyc04g076560.3 Solanum lycopersicum HOM05D005594 ORTHO05D006403 8.4e-18 94.4 149 43.6
QL12p040902 Quercus lobata HOM05D005594 ORTHO05D006403 1.1e-17 94.0 122 44.3
unitig_26.g9553 Utricularia gibba HOM05D005594 ORTHO05D006403 1.9e-17 93.2 107 48.6
Haze_22483 Corylus avellana HOM05D005594 ORTHO05D006403 2.4e-17 92.8 107 47.7
ATR0767G044 Amborella trichopoda HOM05D005594 ORTHO05D006403 4.2e-17 92.0 106 44.3
ClCG02G008140 Citrullus lanatus HOM05D005594 ORTHO05D006403 5.4e-17 91.7 143 40.6
Rhsim06G0070100 Rhododendron simsii HOM05D005594 ORTHO05D006403 5.4e-17 91.7 141 40.4
MD08G1202000 Malus domestica HOM05D005594 ORTHO05D006403 9.3e-17 90.9 145 40.7
Rhsim05G0205900 Rhododendron simsii HOM05D005594 ORTHO05D006403 9.3e-17 90.9 145 40.0
Sc15g0003090 Simmondsia chinensis HOM05D005594 ORTHO05D006403 1.2e-16 90.5 128 45.3
ECA248G0412 Erigeron canadensis HOM05D005594 ORTHO05D006403 2.7e-16 89.4 125 42.4
MSTRG.24680 Avicennia marina HOM05D005594 ORTHO05D006403 3.5e-16 89.0 107 46.7
Manes.18G056600 Manihot esculenta HOM05D005594 ORTHO05D006403 3.5e-16 89.0 107 47.7
Oeu034716.2 Olea europaea HOM05D005594 ORTHO05D006403 3.5e-16 89.0 80 56.2
Sed0005434 Sechium edule HOM05D005594 ORTHO05D006403 3.5e-16 89.0 146 39.0
Cc10_g08520 Coffea canephora HOM05D005594 ORTHO05D006403 4.6e-16 88.6 148 37.8
HanXRQChr15g0472131 Helianthus annuus HOM05D005594 ORTHO05D006403 6.0e-16 88.2 126 42.9
Prupe.1G535400 Prunus persica HOM05D005594 ORTHO05D006403 6.0e-16 88.2 145 40.7
Lj8A490G28 Lonicera japonica HOM05D005594 ORTHO05D006403 1.0e-15 87.4 158 36.7
Cpa.g.sc1556.4 Carica papaya HOM05D005594 ORTHO05D006403 1.7e-15 86.7 141 40.4
FAN08G3514 Fragaria x ananassa HOM05D005594 ORTHO05D006403 1.7e-15 86.7 131 38.9
MELO3C003509.2 Cucumis melo HOM05D005594 ORTHO05D006403 3.0e-15 85.9 145 37.2
Lj8A496G24 Lonicera japonica HOM05D005594 ORTHO05D006403 3.0e-15 85.9 158 36.1
DCAR_028088 Daucus carota HOM05D005594 ORTHO05D006403 8.7e-15 84.3 145 35.9
CDE02G1340 Ceratophyllum demersum HOM05D005594 ORTHO05D006403 1.1e-14 84.0 141 36.2
CsaV3_3G048080 Cucumis sativus L. HOM05D005594 ORTHO05D006403 1.1e-14 84.0 143 37.1
Glyma.06G098500 Glycine max HOM05D005594 ORTHO05D006403 1.9e-14 83.2 126 43.7
Migut.N00274 Erythranthe guttata HOM05D005594 ORTHO05D006403 2.5e-14 82.8 108 45.4
Glyma.04G096700 Glycine max HOM05D005594 ORTHO05D006403 2.5e-14 82.8 127 40.2
FvH4_5g34380 Fragaria vesca HOM05D005594 ORTHO05D006403 3.3e-14 82.4 119 39.5
FAN18G0194 Fragaria x ananassa HOM05D005594 ORTHO05D006403 3.3e-14 82.4 119 39.5
Peaxi162Scf01112g00131 Petunia axillaris HOM05D005594 ORTHO05D006403 3.3e-14 82.4 106 44.3
HPP92_001778 Vanilla planifolia HOM05D005594 ORTHO05D006403 5.6e-14 81.6 147 38.8
Aa31LG1G6880 Aethionema arabicum HOM05D005594 ORTHO05D006403 9.6e-14 80.9 108 41.7
RcHm_v2.0_Chr7g0234971 Rosa chinensis HOM05D005594 ORTHO05D006403 1.6e-13 80.1 119 40.3
Lj4g0023762 Lotus japonicus HOM05D005594 ORTHO05D006403 2.1e-13 79.7 140 39.3
MD08G1202600 Malus domestica HOM05D005594 ORTHO05D006403 2.1e-13 79.7 110 44.5
THA.LOC104800630 Tarenaya hassleriana HOM05D005594 ORTHO05D006403 2.8e-13 79.3 147 37.4
Lalb_Chr23g0269971 Lupinus albus HOM05D005594 ORTHO05D006403 4.8e-13 78.6 127 41.7
Lj1g0021697 Lotus japonicus HOM05D005594 ORTHO05D006403 6.2e-13 78.2 148 39.9
AUR62014367 Chenopodium quinoa HOM05D005594 ORTHO05D006403 8.1e-13 77.8 152 34.2
VMungo1309G0327 Vigna mungo HOM05D005594 ORTHO05D006403 1.1e-12 77.4 127 40.9
arahy.Tifrunner.gnm1.ann1.7TC8PB Arachis hypogaea HOM05D005594 ORTHO05D006403 1.4e-12 77.0 137 38.0
arahy.Tifrunner.gnm1.ann1.X1J0TB Arachis hypogaea HOM05D005594 ORTHO05D006403 1.4e-12 77.0 137 38.0
Phvul.009G035100 Phaseolus vulgaris HOM05D005594 ORTHO05D006403 1.4e-12 77.0 126 41.3
Medtr3g099850 Medicago truncatula HOM05D005594 ORTHO05D006403 2.4e-12 76.3 144 35.4
Sabra05G0119000 Salix brachista HOM05D005594 ORTHO05D006403 2.4e-12 76.3 126 38.1
TPR.G6332 Trifolium pratense HOM05D005594 ORTHO05D006403 6.9e-12 74.7 144 33.3
Potri.005G152200 Populus trichocarpa HOM05D005594 ORTHO05D006403 9.0e-12 74.3 125 37.6
EL10Ac1g00491 Beta vulgaris HOM05D005594 ORTHO05D006403 1.2e-11 73.9 127 37.0
CARHR007650 Cardamine hirsuta HOM05D005594 ORTHO05D006403 1.5e-11 73.6 107 43.0
FAN04G0064 Fragaria x ananassa HOM05D005594 ORTHO05D006403 1.5e-11 73.6 117 36.8
Hund26823 Selenicereus undatus HOM05D005594 ORTHO05D006403 1.5e-11 73.6 145 37.2
Pp3c26_12080 Physcomitrium patens HOM05D005594 ORTHO05D006403 3.4e-11 72.4 104 38.5
CiPaw.01G112000 Carya illinoinensis HOM05D005594 ORTHO05D006403 5.8e-11 71.6 82 48.8
Ah.07g203840 Amaranthus hybridus HOM05D005594 ORTHO05D006403 1.3e-10 70.5 148 35.1
AT1G07840 Arabidopsis thaliana HOM05D005594 ORTHO05D006403 1.7e-10 70.1 107 40.2
AUR62019109 Chenopodium quinoa HOM05D005594 ORTHO05D006403 1.7e-10 70.1 130 37.7
Psat5g049560 Pisum sativum HOM05D005594 ORTHO05D006403 2.9e-10 69.3 149 29.5
BcaNung02661 Brassica carinata HOM05D005594 ORTHO05D006403 4.9e-10 68.6 106 42.5
Ca_26381_v3 Cicer arietinum L. HOM05D005594 ORTHO05D006403 4.9e-10 68.6 100 38.0
Aqoxy5G01356 Aquilegia oxysepala HOM05D005594 ORTHO05D006403 6.4e-10 68.2 77 45.5
MD15G1388800 Malus domestica HOM05D005594 ORTHO05D006403 1.1e-09 67.4 88 44.3
AagrBONN_evm.TU.Sc2ySwM_117.2374 Anthoceros agrestis HOM05D005594 ORTHO05D006403 1.9e-09 66.6 89 42.7
Carub.0001s0718 Capsella rubella HOM05D005594 ORTHO05D006403 4.2e-09 65.5 101 41.6
AagrBONN_evm.TU.Sc2ySwM_228.4407 Anthoceros agrestis HOM05D005056 ORTHO05D006403 5.5e-09 65.1 118 37.3
AL1G18120 Arabidopsis lyrata HOM05D005594 ORTHO05D006403 5.5e-09 65.1 107 38.3
Ca_11286_v3 Cicer arietinum L. HOM05D005594 ORTHO05D006403 5.5e-09 65.1 100 36.0
Sp1g06520 Schrenkiella parvula HOM05D005594 ORTHO05D006403 1.2e-08 63.9 107 38.3
HanXRQChr17g0561001 Helianthus annuus HOM05D005594 ORTHO05D006403 2.1e-08 63.2 81 43.2
Nitab4.5_0005345g0030 Nicotiana tabacum HOM05D005594 ORTHO05D006403 2.1e-08 63.2 79 45.6
Mapoly0041s0093 Marchantia polymorpha HOM05D005056 ORTHO05D006403 4.6e-08 62.0 125 30.4
BolC5t29354H Brassica oleracea HOM05D000310 ORTHO05D000509 6.7e-07 58.2 108 37.0
Zm00001eb365030 Zea mays HOM05D005594 ORTHO05D006403 1.1e-06 57.4 101 34.7
Zm00001eb388820 Zea mays HOM05D005594 ORTHO05D006403 1.9e-06 56.6 136 30.1
Thhalv10008245m.g Eutrema salsugineum HOM05D005594 ORTHO05D006403 2.5e-06 56.2 109 39.4
PGSC0003DMG400009352 Solanum tuberosum HOM05D005594 ORTHO05D006403 3.3e-06 55.8 91 42.9
BraA06t23703Z Brassica rapa HOM05D005594 ORTHO05D006403 5.6e-06 55.1 108 36.1
Os01g0911000 Oryza sativa ssp. japonica HOM05D005594 ORTHO05D006403 5.6e-06 55.1 101 32.7
A06p04960 Brassica napus HOM05D005594 ORTHO05D006403 7.4e-06 54.7 108 36.1
C05p05910 Brassica napus HOM05D005594 ORTHO05D006403 7.4e-06 54.7 108 36.1


User provided reference genes

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