Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00003957 Prasinoderma coloniale HOM05D006074 ORTHO05D008728 8.4e-197 690.3 375 100.0
Pp3c9_19570 Physcomitrium patens HOM05D006074 ORTHO05D008728 2.0e-52 210.7 363 41.0
MCO08G127 Micromonas commoda HOM05D006074 ORTHO05D008728 1.7e-51 207.6 366 41.3
Lj2g0007765 Lotus japonicus HOM05D006074 ORTHO05D008728 1.2e-49 201.4 362 38.7
Psat1g075640 Pisum sativum HOM05D006074 ORTHO05D008728 1.2e-49 201.4 362 38.7
AagrBONN_evm.TU.Sc2ySwM_228.462 Anthoceros agrestis HOM05D006074 ORTHO05D008728 3.5e-49 199.9 398 38.4
arahy.Tifrunner.gnm1.ann1.V4TPJI Arachis hypogaea HOM05D006074 ORTHO05D008728 2.9e-48 196.8 356 37.6
Medtr1g039990 Medicago truncatula HOM05D006074 ORTHO05D008728 2.9e-48 196.8 362 37.6
Sc14g0005980 Simmondsia chinensis HOM05D006074 ORTHO05D008728 2.9e-48 196.8 362 39.5
arahy.Tifrunner.gnm1.ann1.1Y4ZQN Arachis hypogaea HOM05D006074 ORTHO05D008728 2.5e-47 193.7 356 37.4
Carub.0005s0731 Capsella rubella HOM05D006074 ORTHO05D008728 3.2e-47 193.4 358 38.0
Phvul.004G027100 Phaseolus vulgaris HOM05D006074 ORTHO05D008728 5.5e-47 192.6 362 38.1
Actinidia02708 Actinidia chinensis HOM05D006074 ORTHO05D008728 9.4e-47 191.8 364 39.3
Potri.017G080300 Populus trichocarpa HOM05D006074 ORTHO05D008728 2.7e-46 190.3 357 37.8
Mapoly0005s0075 Marchantia polymorpha HOM05D006074 ORTHO05D008728 3.6e-46 189.9 355 38.3
vmacro18203 Vaccinium macrocarpon HOM05D006074 ORTHO05D008728 3.6e-46 189.9 363 38.6
DCAR_021653 Daucus carota HOM05D006074 ORTHO05D008728 4.7e-46 189.5 363 36.1
AL5G18490 Arabidopsis lyrata HOM05D006074 ORTHO05D008728 6.1e-46 189.1 362 37.6
Eucgr.J01218 Eucalyptus grandis HOM05D006074 ORTHO05D008728 6.1e-46 189.1 400 37.0
Aqoxy3G03321 Aquilegia oxysepala HOM05D006074 ORTHO05D008728 8.0e-46 188.7 364 37.6
Rhsim08G0067900 Rhododendron simsii HOM05D006074 ORTHO05D008728 1.0e-45 188.3 365 38.4
TAR622G0709 Trochodendron aralioides HOM05D006074 ORTHO05D008728 1.8e-45 187.6 364 37.9
TAR729G0002 Trochodendron aralioides HOM05D006074 ORTHO05D008728 1.8e-45 187.6 364 37.9
AT3G28760 Arabidopsis thaliana HOM05D006074 ORTHO05D008728 2.3e-45 187.2 358 37.7
Hma1.2p1_0449F.1_g155300 Hydrangea macrophylla HOM05D006074 ORTHO05D008728 3.0e-45 186.8 359 38.7
Aa31LG2G4460 Aethionema arabicum HOM05D006074 ORTHO05D008728 4.0e-45 186.4 357 36.7
VMungo0464G0585 Vigna mungo HOM05D006074 ORTHO05D008728 4.0e-45 186.4 365 36.2
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 5.2e-45 186.0 358 37.7
BraA06t26953Z Brassica rapa HOM05D006074 ORTHO05D008728 5.2e-45 186.0 358 37.7
PGR083G0972 Punica granatum HOM05D006074 ORTHO05D008728 5.2e-45 186.0 359 38.2
BcaC06g30896 Brassica carinata HOM05D006074 ORTHO05D008728 6.7e-45 185.7 358 36.9
Migut.H00904 Erythranthe guttata HOM05D006074 ORTHO05D008728 1.5e-44 184.5 362 37.8
MBI02_g10680_MAGBIO Magnolia biondii HOM05D006074 ORTHO05D008728 1.5e-44 184.5 365 37.8
PSO591G0110 Papaver somniferum HOM05D006074 ORTHO05D008728 1.5e-44 184.5 366 36.1
Sabra17G0072000 Salix brachista HOM05D006074 ORTHO05D008728 1.5e-44 184.5 357 37.3
Lsat_1_v5_gn_4_177200 Lactuca sativa HOM05D006074 ORTHO05D008728 2.0e-44 184.1 365 37.0
MD09G1048800 Malus domestica HOM05D006074 ORTHO05D008728 2.0e-44 184.1 363 37.2
TPR.G10370 Trifolium pratense HOM05D006074 ORTHO05D008728 2.0e-44 184.1 305 39.3
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 2.6e-44 183.7 358 37.2
Prupe.3G270100 Prunus persica HOM05D006074 ORTHO05D008728 3.3e-44 183.3 365 37.0
Lalb_Chr21g0318901 Lupinus albus HOM05D006074 ORTHO05D008728 4.4e-44 183.0 356 36.8
Zm00001eb402270 Zea mays HOM05D006074 ORTHO05D008728 4.4e-44 183.0 361 36.3
BcaC06g33639 Brassica carinata HOM05D006074 ORTHO05D008728 5.7e-44 182.6 358 37.2
FAN02G2663 Fragaria x ananassa HOM05D006074 ORTHO05D008728 5.7e-44 182.6 366 37.7
PSO832G2479 Papaver somniferum HOM05D006074 ORTHO05D008728 5.7e-44 182.6 366 35.5
CSS0024892 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 7.4e-44 182.2 364 38.2
FvH4_6g49080 Fragaria vesca HOM05D006074 ORTHO05D008728 7.4e-44 182.2 366 37.4
Sp2g17410 Schrenkiella parvula HOM05D006074 ORTHO05D008728 7.4e-44 182.2 359 37.0
ATR0564G024 Amborella trichopoda HOM05D006074 ORTHO05D008728 9.7e-44 181.8 367 37.1
ECA232G4667 Erigeron canadensis HOM05D006074 ORTHO05D008728 9.7e-44 181.8 355 36.9
CiPaw.03G029000 Carya illinoinensis HOM05D006074 ORTHO05D008728 1.7e-43 181.0 357 37.0
BolC7t44287H Brassica oleracea HOM05D006074 ORTHO05D008728 2.2e-43 180.6 358 36.9
ClCG10G014940 Citrullus lanatus HOM05D006074 ORTHO05D008728 2.8e-43 180.3 363 36.6
CsaV3_3G041590 Cucumis sativus L. HOM05D006074 ORTHO05D008728 2.8e-43 180.3 364 36.0
Pp3c10_1080 Physcomitrium patens HOM05D006074 ORTHO05D008728 3.7e-43 179.9 363 37.7
Thecc.04G099800 Theobroma cacao HOM05D006074 ORTHO05D008728 3.7e-43 179.9 358 37.2
Duzib187G1598 Durio zibethinus HOM05D006074 ORTHO05D008728 4.8e-43 179.5 358 37.2
TWI34G1337 Tripterygium wilfordii HOM05D006074 ORTHO05D008728 4.8e-43 179.5 350 37.7
MELO3C009883.2 Cucumis melo HOM05D006074 ORTHO05D008728 6.3e-43 179.1 362 37.0
HanXRQChr09g0265461 Helianthus annuus HOM05D006074 ORTHO05D008728 6.3e-43 179.1 361 35.7
Oeu060929.1 Olea europaea HOM05D006074 ORTHO05D008728 6.3e-43 179.1 363 36.1
RcHm_v2.0_Chr2g0168871 Rosa chinensis HOM05D006074 ORTHO05D008728 6.3e-43 179.1 363 36.6
CANSAT64G1183 Cannabis sativa HOM05D006074 ORTHO05D008728 1.1e-42 178.3 357 38.1
THA.LOC104823933 Tarenaya hassleriana HOM05D006074 ORTHO05D008728 1.1e-42 178.3 358 36.3
QL02p081203 Quercus lobata HOM05D006074 ORTHO05D008728 1.8e-42 177.6 389 36.5
COL.COLO4_36112 Corchorus olitorius HOM05D006074 ORTHO05D008728 2.4e-42 177.2 351 37.3
AUR62031615 Chenopodium quinoa HOM05D006074 ORTHO05D008728 5.3e-42 176.0 361 36.8
AUR62038861 Chenopodium quinoa HOM05D006074 ORTHO05D008728 5.3e-42 176.0 361 36.6
GSVIVG01011374001 Vitis vinifera HOM05D006074 ORTHO05D008728 9.1e-42 175.3 363 36.6
CSS0026498 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 1.2e-41 174.9 364 37.9
PGSC0003DMG400009217 Solanum tuberosum HOM05D006074 ORTHO05D008728 1.6e-41 174.5 362 35.9
Os03g0170300 Oryza sativa ssp. japonica HOM05D006074 ORTHO05D008728 2.0e-41 174.1 388 33.5
Sopen03g012680 Solanum pennellii HOM05D006074 ORTHO05D008728 2.0e-41 174.1 362 35.6
Lju41C23G10 Lonicera japonica HOM05D006074 ORTHO05D008728 2.6e-41 173.7 366 37.4
Hund15626 Selenicereus undatus HOM05D006074 ORTHO05D008728 3.5e-41 173.3 369 36.9
Gohir.A07G215200 Gossypium hirsutum HOM05D006074 ORTHO05D008728 5.9e-41 172.6 378 35.2
Ca_04272_v3 Cicer arietinum L. HOM05D006074 ORTHO05D008728 7.7e-41 172.2 304 38.5
Nn4g23084 Nelumbo nucifera HOM05D006074 ORTHO05D008728 7.7e-41 172.2 319 38.6
EL10Ac2g02949 Beta vulgaris HOM05D006074 ORTHO05D008728 1.3e-40 171.4 363 35.8
CANSAT64G2140 Cannabis sativa HOM05D006074 ORTHO05D008728 1.7e-40 171.0 357 37.5
Solyc03g058860.3 Solanum lycopersicum HOM05D006074 ORTHO05D008728 2.2e-40 170.6 397 34.5
Cc07_g03180 Coffea canephora HOM05D006074 ORTHO05D008728 5.0e-40 169.5 363 35.3
Atru.BG.207.p Acer truncatum HOM05D006074 ORTHO05D008728 6.5e-40 169.1 349 36.4
SalBow1G4287 Salvia bowleyana HOM05D006074 ORTHO05D008728 6.5e-40 169.1 388 35.3
Peaxi162Scf00451g00822 Petunia axillaris HOM05D006074 ORTHO05D008728 8.5e-40 168.7 303 38.6
Gohir.D07G222100 Gossypium hirsutum HOM05D006074 ORTHO05D008728 4.2e-39 166.4 378 34.7
Nitab4.5_0003081g0050 Nicotiana tabacum HOM05D006074 ORTHO05D008728 7.2e-39 165.6 315 36.2
Nitab4.5_0000002g0350 Nicotiana tabacum HOM05D006074 ORTHO05D008728 9.4e-39 165.2 315 36.2
CAN.G579.8 Capsicum annuum HOM05D006074 ORTHO05D008728 1.2e-38 164.9 387 34.9
Cre05.g248250 Chlamydomonas reinhardtii HOM05D006074 ORTHO05D008728 2.1e-38 164.1 413 34.4
SGA_v2.0_scaffold59G20672 Striga asiatica HOM05D006074 ORTHO05D008728 6.1e-38 162.5 263 40.3
Thhalv10004593m.g Eutrema salsugineum HOM05D006074 ORTHO05D008728 1.0e-37 161.8 328 36.6
Gorai.001G256400 Gossypium raimondii HOM05D006074 ORTHO05D008728 1.0e-37 161.8 412 32.8
Sed0009974 Sechium edule HOM05D006074 ORTHO05D008728 1.0e-37 161.8 383 33.7
Cpa.g.sc14.19 Carica papaya HOM05D006074 ORTHO05D008728 1.8e-37 161.0 405 32.3
Pp3c15_19890 Physcomitrium patens HOM05D006074 ORTHO05D008728 2.3e-37 160.6 319 37.3
Glyma.19G020800 Glycine max HOM05D006074 ORTHO05D008728 5.2e-37 159.5 362 35.1
CSS0026374 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 1.4e-34 151.4 370 35.4
Ciclev10012867m.g Citrus clementina HOM05D006074 ORTHO05D008728 3.1e-34 150.2 154 53.9
Manes.15G177000 Manihot esculenta HOM05D006074 ORTHO05D008728 9.1e-34 148.7 278 35.6
CSS0037615 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 3.5e-33 146.7 372 34.7
Dinv33738 Davidia involucrata HOM05D006074 ORTHO05D008728 7.2e-31 139.0 362 35.1
SEGI_14685 Sequoiadendron giganteum HOM05D006074 ORTHO05D008728 5.2e-29 132.9 184 41.3
Glyma.13G064100 Glycine max HOM05D006074 ORTHO05D008728 1.3e-27 128.3 200 42.5
Pp3c1_20750 Physcomitrium patens HOM05D006074 ORTHO05D020966 1.2e-25 121.7 417 27.6
Pp3c1_20753 Physcomitrium patens HOM05D006074 ORTHO05D020966 1.2e-25 121.7 417 27.6
Lsat_1_v5_gn_4_177220 Lactuca sativa HOM05D006074 ORTHO05D008728 2.8e-22 110.5 177 39.5
CDE02G2631 Ceratophyllum demersum HOM05D006074 ORTHO05D008728 1.4e-21 108.2 170 41.2
Pp3c2_18540 Physcomitrium patens HOM05D006074 ORTHO05D020966 1.8e-21 107.8 418 27.0
unitig_21.g20922 Utricularia gibba HOM05D006074 ORTHO05D008728 4.0e-21 106.7 260 30.0
FAN14G0759 Fragaria x ananassa HOM05D006074 ORTHO05D008728 4.9e-19 99.8 355 30.4
Pp3c10_2120 Physcomitrium patens HOM05D006074 ORTHO05D020966 5.4e-18 96.3 137 42.3
Pp3c20_4730 Physcomitrium patens HOM05D006074 ORTHO05D026055 2.8e-06 57.4 117 35.9
Pp3c23_20410 Physcomitrium patens HOM05D006074 ORTHO05D026055 6.2e-06 56.2 75 42.7


User provided reference genes

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