Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 3.3e-167 591.7 306 100.0
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 3.9e-43 179.5 326 38.7
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 1.1e-40 171.4 283 38.9
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 3.5e-39 166.4 271 38.4
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 1.7e-38 164.1 305 37.4
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 2.2e-38 163.7 271 36.9
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 2.9e-38 163.3 282 39.0
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 5.0e-38 162.5 271 38.7
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 8.5e-38 161.8 289 37.7
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.9e-37 160.6 282 38.7
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.9e-37 160.6 282 38.7
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 2.5e-37 160.2 271 38.7
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 4.2e-37 159.5 289 37.4
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 7.2e-37 158.7 298 37.2
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 7.2e-37 158.7 280 37.9
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 1.2e-36 157.9 272 36.8
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 1.6e-36 157.5 293 37.2
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 1.6e-36 157.5 280 38.6
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 1.6e-36 157.5 273 38.5
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 2.1e-36 157.1 282 37.9
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 2.7e-36 156.8 282 37.6
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 2.7e-36 156.8 282 37.6
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 2.7e-36 156.8 288 36.5
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 3.6e-36 156.4 273 38.8
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 3.6e-36 156.4 279 37.6
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 3.6e-36 156.4 282 37.2
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 3.6e-36 156.4 282 36.9
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 3.6e-36 156.4 273 37.4
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 3.6e-36 156.4 270 39.3
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 3.6e-36 156.4 282 37.6
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 3.6e-36 156.4 273 37.7
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 4.7e-36 156.0 285 37.9
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.7e-36 156.0 279 37.6
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 6.1e-36 155.6 280 36.8
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 6.1e-36 155.6 282 37.6
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 6.1e-36 155.6 281 38.1
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 8.0e-36 155.2 292 36.6
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 8.0e-36 155.2 279 37.6
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 8.0e-36 155.2 282 37.2
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 1.0e-35 154.8 282 38.3
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 1.4e-35 154.5 273 38.1
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 1.4e-35 154.5 280 37.1
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 2.3e-35 153.7 307 35.8
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 2.3e-35 153.7 273 37.4
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 2.3e-35 153.7 273 38.5
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 2.3e-35 153.7 273 37.0
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 3.0e-35 153.3 307 35.8
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 3.0e-35 153.3 280 37.1
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 3.0e-35 153.3 280 36.4
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 3.0e-35 153.3 280 36.4
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 3.9e-35 152.9 292 36.3
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 3.9e-35 152.9 273 37.0
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 3.9e-35 152.9 273 37.0
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 3.9e-35 152.9 282 37.2
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 5.2e-35 152.5 282 37.9
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 5.2e-35 152.5 293 35.8
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 6.7e-35 152.1 274 38.3
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 8.8e-35 151.8 295 36.9
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 8.8e-35 151.8 283 37.5
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 8.8e-35 151.8 289 37.7
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 8.8e-35 151.8 289 37.7
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 8.8e-35 151.8 294 35.7
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 1.1e-34 151.4 282 37.2
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 1.1e-34 151.4 281 37.0
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 1.1e-34 151.4 282 36.9
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 1.1e-34 151.4 282 37.6
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 1.5e-34 151.0 283 37.5
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 2.0e-34 150.6 271 37.3
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 3.3e-34 149.8 304 36.5
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 3.3e-34 149.8 282 36.9
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 3.3e-34 149.8 272 37.5
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 5.7e-34 149.1 281 36.7
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 7.4e-34 148.7 282 36.2
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 9.7e-34 148.3 261 39.5
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 9.7e-34 148.3 301 34.9
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 2.2e-33 147.1 282 36.2
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 4.8e-33 146.0 271 36.5
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 6.3e-33 145.6 282 37.9
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 5.3e-32 142.5 262 37.0
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 5.3e-32 142.5 272 36.8
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 7.0e-32 142.1 262 38.2
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 1.6e-31 141.0 282 36.5
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.0e-31 140.6 267 36.7
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 2.6e-31 140.2 262 37.0
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 5.0e-30 136.0 323 32.5
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 8.5e-30 135.2 260 36.9
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 8.5e-30 135.2 324 32.4
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 4.2e-29 132.9 227 38.3
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 4.2e-29 132.9 271 35.4
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 5.5e-29 132.5 261 35.6
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 4.7e-28 129.4 234 37.2
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 6.1e-28 129.0 245 38.4
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 1.0e-27 128.3 247 37.7
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 1.0e-27 128.3 250 37.6
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 1.4e-27 127.9 252 37.3
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 1.4e-27 127.9 252 37.3
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 1.4e-27 127.9 272 33.1
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 4.0e-27 126.3 221 38.0
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 6.8e-27 125.6 273 35.2
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 2.0e-26 124.0 235 37.0
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 2.6e-26 123.6 260 34.2
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 2.6e-26 123.6 273 34.4
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 4.4e-26 122.9 233 38.2
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 5.7e-26 122.5 230 35.7
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 7.5e-26 122.1 221 37.1
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 1.7e-25 120.9 233 36.5
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 6.3e-25 119.0 219 38.8
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 6.3e-25 119.0 282 33.0
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 4.1e-24 116.3 231 35.9
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 1.0e-22 111.7 232 36.2
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 1.0e-22 111.7 226 36.3
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 1.0e-22 111.7 257 33.1
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 1.1e-21 108.2 209 37.8
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 1.1e-21 108.2 193 38.3
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 1.5e-21 107.8 221 35.3
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 7.2e-21 105.5 193 37.8
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 2.7e-20 103.6 267 31.8
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 2.0e-18 97.4 216 34.3
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 4.7e-12 76.3 95 38.9
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 6.1e-12 75.9 231 28.6


User provided reference genes

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