Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00000045 Prasinoderma coloniale HOM05D005379 ORTHO05D006661 5.7e-152 540.8 260 100.0
Actinidia31774 Actinidia chinensis HOM05D005379 ORTHO05D006661 1.1e-14 84.7 186 28.5
Sc18g0007310 Simmondsia chinensis HOM05D005379 ORTHO05D006661 1.1e-14 84.7 179 27.9
AagrBONN_evm.TU.Sc2ySwM_228.472 Anthoceros agrestis HOM05D005379 ORTHO05D006661 2.5e-14 83.6 189 31.2
CBR_g48514 Chara braunii HOM05D005379 ORTHO05D006661 2.1e-13 80.5 182 31.9
Mapoly0029s0089 Marchantia polymorpha HOM05D005379 ORTHO05D006661 2.8e-13 80.1 180 31.7
Ah.13g071160 Amaranthus hybridus HOM05D005379 ORTHO05D006661 4.7e-13 79.3 184 28.3
AT5G51220 Arabidopsis thaliana HOM05D005379 ORTHO05D006661 8.0e-13 78.6 248 27.0
FvH4_7g27000 Fragaria vesca HOM05D005379 ORTHO05D006661 8.0e-13 78.6 222 27.9
Dinv06588 Davidia involucrata HOM05D005379 ORTHO05D006661 1.4e-12 77.8 179 27.4
CSS0027857 Camellia sinensis var. sinensis HOM05D005379 ORTHO05D006661 4.0e-12 76.3 186 26.9
CARHR256800 Cardamine hirsuta HOM05D005379 ORTHO05D006661 1.2e-11 74.7 179 27.4
Cc02_g04670 Coffea canephora HOM05D005379 ORTHO05D006661 1.2e-11 74.7 192 28.6
Cre01.g052050 Chlamydomonas reinhardtii HOM05D005379 ORTHO05D006661 2.0e-11 73.9 179 29.6
Pp3c8_7310 Physcomitrium patens HOM05D005379 ORTHO05D006661 2.0e-11 73.9 191 30.4
Rhsim03G0161700 Rhododendron simsii HOM05D005379 ORTHO05D006661 2.0e-11 73.9 204 27.9
Hund11852 Selenicereus undatus HOM05D005379 ORTHO05D006661 2.0e-11 73.9 179 26.8
BcaB08g35480 Brassica carinata HOM05D005379 ORTHO05D006661 2.6e-11 73.6 214 27.1
TAR375G0328 Trochodendron aralioides HOM05D005379 ORTHO05D006661 4.4e-11 72.8 181 28.2
GSVIVG01013977001 Vitis vinifera HOM05D005379 ORTHO05D006661 4.4e-11 72.8 179 26.3
Thhalv10014342m.g Eutrema salsugineum HOM05D005379 ORTHO05D006661 7.5e-11 72.0 245 26.5
PSO063G0621 Papaver somniferum HOM05D005379 ORTHO05D006661 7.5e-11 72.0 179 26.3
SGA_v2.0_scaffold60G20811 Striga asiatica HOM05D005379 ORTHO05D006661 1.7e-10 70.9 176 27.3
BcaC04g20721 Brassica carinata HOM05D005379 ORTHO05D006661 2.2e-10 70.5 214 26.6
Sp6g13420 Schrenkiella parvula HOM05D005379 ORTHO05D006661 1.9e-09 67.4 241 25.7
ATR0057G081 Amborella trichopoda HOM05D005379 ORTHO05D006661 5.4e-09 65.9 182 26.9
FAN06G0815 Fragaria x ananassa HOM05D005379 ORTHO05D006661 5.4e-09 65.9 220 27.3
SMO361G0220 Selaginella moellendorffii HOM05D005379 ORTHO05D006661 1.6e-08 64.3 174 28.7
FAN06G1013 Fragaria x ananassa HOM05D005379 ORTHO05D006661 2.1e-08 63.9 144 30.6
A10p07900 Brassica napus HOM05D005379 ORTHO05D006661 4.6e-08 62.8 140 30.0
BraSC35t46008Z Brassica rapa HOM05D005379 ORTHO05D006661 4.6e-08 62.8 140 30.0
FAN10G0849 Fragaria x ananassa HOM05D005379 ORTHO05D006661 4.6e-08 62.8 171 29.2
vmacro06833 Vaccinium macrocarpon HOM05D005379 ORTHO05D006661 4.6e-08 62.8 106 31.1
C09p39890 Brassica napus HOM05D005379 ORTHO05D006661 6.0e-08 62.4 140 30.0
BolC9t56888H Brassica oleracea HOM05D005379 ORTHO05D006661 6.0e-08 62.4 140 30.0


User provided reference genes

Program Settings