Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401025391 Solanum tuberosum HOM05D007288 ORTHO05D009200 2.9e-120 435.3 220 100.0
Sopen11g030260 Solanum pennellii HOM05D007288 ORTHO05D009200 2.3e-117 425.6 220 97.7
Solyc11g072610.3 Solanum lycopersicum HOM05D007288 ORTHO05D009200 6.6e-117 424.1 220 97.3
GSVIVG01025099001 Vitis vinifera HOM05D007288 ORTHO05D009200 7.9e-86 320.9 220 71.8
Cfa011389 Carpinus fangiana HOM05D007288 ORTHO05D009200 1.0e-85 320.5 220 71.4
Oeu058505.2 Olea europaea HOM05D007288 ORTHO05D009200 6.7e-85 317.8 213 73.7
RcHm_v2.0_Chr5g0061521 Rosa chinensis HOM05D007288 ORTHO05D009200 1.9e-84 316.2 218 72.0
Prupe.6G090900 Prunus persica HOM05D007288 ORTHO05D009200 3.3e-84 315.5 216 72.2
Atru.chr3.3740 Acer truncatum HOM05D007288 ORTHO05D009200 1.3e-83 313.5 213 72.8
Actinidia00813 Actinidia chinensis HOM05D007288 ORTHO05D009200 2.8e-83 312.4 216 72.2
CSS0002437 Camellia sinensis var. sinensis HOM05D007288 ORTHO05D009200 4.8e-83 311.6 218 70.6
MD11G1120900 Malus domestica HOM05D007288 ORTHO05D009200 8.1e-83 310.8 213 71.8
FAN21G3325 Fragaria x ananassa HOM05D007288 ORTHO05D009200 1.8e-82 309.7 216 71.3
Thecc.09G336000 Theobroma cacao HOM05D007288 ORTHO05D009200 3.1e-82 308.9 218 70.2
QL01p035799 Quercus lobata HOM05D007288 ORTHO05D009200 9.0e-82 307.4 218 69.7
Manes.04G027100 Manihot esculenta HOM05D007288 ORTHO05D009200 3.4e-81 305.4 218 69.7
Gohir.A07G093400 Gossypium hirsutum HOM05D007288 ORTHO05D009200 4.5e-81 305.1 220 68.6
Gorai.001G105400 Gossypium raimondii HOM05D007288 ORTHO05D009200 4.5e-81 305.1 220 68.6
FvH4_3g33990 Fragaria vesca HOM05D007288 ORTHO05D009200 1.0e-80 303.9 216 70.4
SGA_v2.0_scaffold146G36239 Striga asiatica HOM05D007288 ORTHO05D009200 2.2e-80 302.8 217 71.9
MSTRG.12620 Avicennia marina HOM05D007288 ORTHO05D009200 4.9e-80 301.6 217 70.5
FAN16G0816 Fragaria x ananassa HOM05D007288 ORTHO05D009200 4.9e-80 301.6 216 70.4
Haze_23956 Corylus avellana HOM05D007288 ORTHO05D009200 6.5e-80 301.2 252 61.9
Gohir.D07G098000 Gossypium hirsutum HOM05D007288 ORTHO05D009200 6.5e-80 301.2 220 68.2
Hma1.2p1_0861F.1_g229670 Hydrangea macrophylla HOM05D007288 ORTHO05D009200 6.5e-80 301.2 206 72.3
Hma1.2p1_0861F.1_g229675 Hydrangea macrophylla HOM05D007288 ORTHO05D009200 6.5e-80 301.2 206 72.3
Lsat_1_v5_gn_5_164600 Lactuca sativa HOM05D007288 ORTHO05D009200 8.4e-80 300.8 211 71.6
Lj2A1042T48 Lonicera japonica HOM05D007288 ORTHO05D009200 8.4e-80 300.8 214 71.5
Peaxi162Scf00616g00015 Petunia axillaris HOM05D007288 ORTHO05D009200 3.2e-79 298.9 205 76.6
Sed0021724 Sechium edule HOM05D007288 ORTHO05D009200 5.5e-79 298.1 211 70.6
TAR623G1771 Trochodendron aralioides HOM05D007288 ORTHO05D009200 9.3e-79 297.4 221 70.1
Thhalv10017710m.g Eutrema salsugineum HOM05D007288 ORTHO05D009200 2.1e-78 296.2 217 66.8
CiPaw.13G104600 Carya illinoinensis HOM05D007288 ORTHO05D009200 7.9e-78 294.3 220 65.0
Aqoxy4G03169 Aquilegia oxysepala HOM05D007288 ORTHO05D009200 1.8e-77 293.1 218 67.9
CARHR121570 Cardamine hirsuta HOM05D007288 ORTHO05D009200 3.0e-77 292.4 216 66.7
CsaV3_6G021820 Cucumis sativus L. HOM05D007288 ORTHO05D009200 6.7e-77 291.2 212 68.4
HanXRQChr15g0493521 Helianthus annuus HOM05D007288 ORTHO05D009200 8.7e-77 290.8 216 68.5
Psat5g276680 Pisum sativum HOM05D007288 ORTHO05D009200 8.7e-77 290.8 213 68.5
Carub.0004s0953 Capsella rubella HOM05D007288 ORTHO05D009200 1.9e-76 289.7 216 65.7
ClCG02G020790 Citrullus lanatus HOM05D007288 ORTHO05D009200 5.7e-76 288.1 206 70.4
AT2G28560 Arabidopsis thaliana HOM05D007288 ORTHO05D009200 7.4e-76 287.7 213 66.7
PGR102G2823 Punica granatum HOM05D007288 ORTHO05D009200 9.6e-76 287.3 213 69.5
BcaB06g28228 Brassica carinata HOM05D007288 ORTHO05D009200 1.3e-75 287.0 217 65.4
FAN11G2413 Fragaria x ananassa HOM05D007288 ORTHO05D009200 1.3e-75 287.0 249 61.0
THA.LOC104800033 Tarenaya hassleriana HOM05D007288 ORTHO05D009200 1.3e-75 287.0 216 68.5
THA.LOC104815758 Tarenaya hassleriana HOM05D007288 ORTHO05D009200 1.3e-75 287.0 216 68.5
ECA248G2408 Erigeron canadensis HOM05D007288 ORTHO05D009200 2.1e-75 286.2 211 68.7
Lj3g0012395 Lotus japonicus HOM05D007288 ORTHO05D009200 2.8e-75 285.8 213 67.6
Nn2g10628 Nelumbo nucifera HOM05D007288 ORTHO05D009200 3.7e-75 285.4 215 65.1
COL.COLO4_18386 Corchorus olitorius HOM05D007288 ORTHO05D009200 1.1e-74 283.9 236 63.1
PSO384G1093 Papaver somniferum HOM05D007288 ORTHO05D009200 1.1e-74 283.9 214 66.8
Sc21g0000170 Simmondsia chinensis HOM05D007288 ORTHO05D009200 1.1e-74 283.9 214 67.3
Sp4g11390 Schrenkiella parvula HOM05D007288 ORTHO05D009200 3.1e-74 282.3 218 64.7
Cpa.g.sc139.41 Carica papaya HOM05D007288 ORTHO05D009200 4.1e-74 282.0 206 69.4
Medtr2g093050 Medicago truncatula HOM05D007288 ORTHO05D009200 1.2e-73 280.4 206 69.4
PSO339G6024 Papaver somniferum HOM05D007288 ORTHO05D009200 1.2e-73 280.4 214 66.4
Lalb_Chr14g0374871 Lupinus albus HOM05D007288 ORTHO05D009200 2.0e-73 279.6 213 67.1
TWI75G0177 Tripterygium wilfordii HOM05D007288 ORTHO05D009200 2.6e-73 279.3 218 64.7
CANSAT54G2720 Cannabis sativa HOM05D007288 ORTHO05D009200 5.9e-73 278.1 213 65.7
Eucgr.B02451 Eucalyptus grandis HOM05D007288 ORTHO05D009200 5.9e-73 278.1 219 64.4
Ca_01448_v3 Cicer arietinum L. HOM05D007288 ORTHO05D009200 7.6e-73 277.7 212 68.4
Nitab4.5_0014946g0010 Nicotiana tabacum HOM05D007288 ORTHO05D009200 1.7e-72 276.6 206 72.8
Cc01_g11850 Coffea canephora HOM05D007288 ORTHO05D009200 2.2e-72 276.2 206 69.4
arahy.Tifrunner.gnm1.ann1.A288I1 Arachis hypogaea HOM05D007288 ORTHO05D009200 2.9e-72 275.8 212 65.6
SalBow3G3212 Salvia bowleyana HOM05D007288 ORTHO05D009200 5.0e-72 275.0 213 68.1
Glyma.15G044300 Glycine max HOM05D007288 ORTHO05D009200 6.5e-72 274.6 206 68.0
Nitab4.5_0004512g0010 Nicotiana tabacum HOM05D007288 ORTHO05D009200 1.4e-71 273.5 205 70.7
BolC4t27295H Brassica oleracea HOM05D007288 ORTHO05D009200 7.2e-71 271.2 203 67.5
A04p21650 Brassica napus HOM05D007288 ORTHO05D009200 1.2e-70 270.4 208 65.4
BcaC02g08159 Brassica carinata HOM05D007288 ORTHO05D009200 2.1e-70 269.6 203 67.0
C04p57770 Brassica napus HOM05D007288 ORTHO05D009200 2.1e-70 269.6 203 67.0
BraA04t17729Z Brassica rapa HOM05D007288 ORTHO05D009200 2.1e-70 269.6 203 67.0
unitig_61.g26166 Utricularia gibba HOM05D007288 ORTHO05D009200 4.6e-70 268.5 210 63.3
AUR62025046 Chenopodium quinoa HOM05D007288 ORTHO05D009200 1.0e-69 267.3 214 66.8
ATR0594G195 Amborella trichopoda HOM05D007288 ORTHO05D009200 7.4e-68 261.2 208 63.5
Os05g0121700 Oryza sativa ssp. japonica HOM05D007288 ORTHO05D009200 1.4e-66 256.9 210 62.4
Dinv32816 Davidia involucrata HOM05D007288 ORTHO05D009200 1.8e-66 256.5 198 65.7
arahy.Tifrunner.gnm1.ann1.93BU3Z Arachis hypogaea HOM05D007288 ORTHO05D009200 2.6e-65 252.7 263 52.9
Ciclev10028721m.g Citrus clementina HOM05D007288 ORTHO05D009200 1.9e-63 246.5 203 62.6
MELO3C025727.2 Cucumis melo HOM05D007288 ORTHO05D009200 4.6e-62 241.9 218 60.1
HPP92_001033 Vanilla planifolia HOM05D007288 ORTHO05D009200 6.7e-61 238.0 208 58.7
Hund08177 Selenicereus undatus HOM05D007288 ORTHO05D009200 8.8e-61 237.7 216 59.7
Zm00001eb355220 Zea mays HOM05D007288 ORTHO05D009200 2.8e-59 232.6 201 60.2
CSS0029402 Camellia sinensis var. sinensis HOM05D007288 ORTHO05D009200 3.7e-59 232.3 162 69.8
vmacro14486 Vaccinium macrocarpon HOM05D007288 ORTHO05D009200 8.2e-59 231.1 206 60.2
VMungo1080G1892 Vigna mungo HOM05D007288 ORTHO05D009200 3.9e-53 212.2 158 70.3
CAN.G84.32 Capsicum annuum HOM05D007288 ORTHO05D009200 1.3e-51 207.2 119 86.6
SEGI_21779 Sequoiadendron giganteum HOM05D007288 ORTHO05D009200 3.8e-48 195.7 215 47.9
TPR.G11590 Trifolium pratense HOM05D007288 ORTHO05D009200 3.8e-48 195.7 142 66.9
CDE04G2273 Ceratophyllum demersum HOM05D007288 ORTHO05D009200 5.2e-45 185.3 177 57.1
Aqoxy7G02469 Aquilegia oxysepala HOM05D007288 ORTHO05D009200 3.2e-39 166.0 129 63.6
Phvul.L000462 Phaseolus vulgaris HOM05D007288 ORTHO05D009200 4.7e-38 162.2 118 72.0
Ah.01g002370 Amaranthus hybridus HOM05D007288 ORTHO05D009200 1.8e-34 150.2 165 55.2
Pp3c25_15290 Physcomitrium patens HOM05D007288 ORTHO05D009200 5.9e-33 145.2 197 40.1
Mapoly0007s0061 Marchantia polymorpha HOM05D007288 ORTHO05D009200 2.0e-28 130.2 198 37.4
AagrBONN_evm.TU.Sc2ySwM_368.1709 Anthoceros agrestis HOM05D007288 ORTHO05D009200 6.3e-27 125.2 186 41.9
Nn4g25076 Nelumbo nucifera HOM05D000414 ORTHO05D009653 5.9e-25 118.6 137 45.3
CBR_g23396 Chara braunii HOM05D007288 ORTHO05D009200 2.8e-22 109.8 191 36.1
Psat2g091240 Pisum sativum HOM05D007288 ORTHO05D009200 6.4e-19 98.6 67 74.6
TPR.G11620 Trifolium pratense HOM05D007288 ORTHO05D009200 3.2e-18 96.3 65 73.8
Cre01.g025300 Chlamydomonas reinhardtii HOM05D007288 ORTHO05D009200 2.3e-13 80.1 228 26.3
MCO10G289 Micromonas commoda HOM05D007288 ORTHO05D009200 2.6e-12 76.6 156 34.6
PRCOL_00002179 Prasinoderma coloniale HOM05D007288 ORTHO05D009200 7.5e-12 75.1 207 27.5
Aqoxy1G03071 Aquilegia oxysepala HOM05D005441 ORTHO05D006879 5.4e-10 68.9 46 67.4


User provided reference genes

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