Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401025354 Solanum tuberosum HOM05D000228 ORTHO05D021177 2.5e-26 121.3 59 100.0
Nitab4.5_0004015g0070 Nicotiana tabacum HOM05D000228 ORTHO05D001545 2.9e-19 97.8 46 100.0
Nitab4.5_0004839g0020 Nicotiana tabacum HOM05D000228 ORTHO05D001545 2.9e-19 97.8 46 100.0
Sopen11g030400 Solanum pennellii HOM05D000228 ORTHO05D001545 6.5e-19 96.7 46 97.8
CAN.G1190.18 Capsicum annuum HOM05D000228 ORTHO05D001545 2.5e-18 94.7 46 97.8
Peaxi162Scf00616g00511 Petunia axillaris HOM05D000228 ORTHO05D001545 5.5e-18 93.6 46 95.7
Solyc11g072730.2 Solanum lycopersicum HOM05D000228 ORTHO05D001545 5.5e-18 93.6 46 95.7
Rhsim01G0223300 Rhododendron simsii HOM05D000228 ORTHO05D001545 8.8e-16 86.3 46 87.0
Actinidia03765 Actinidia chinensis HOM05D000228 ORTHO05D001545 2.5e-15 84.7 46 82.6
Migut.A00876 Erythranthe guttata HOM05D000228 ORTHO05D001545 3.3e-15 84.3 46 84.8
Migut.C00025 Erythranthe guttata HOM05D000228 ORTHO05D001545 3.3e-15 84.3 46 84.8
Lj8A494T11 Lonicera japonica HOM05D000228 ORTHO05D021177 3.3e-15 84.3 47 80.9
CSS0025979 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D001545 5.7e-15 83.6 46 82.6
CSS0035598 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D001545 5.7e-15 83.6 46 82.6
vmacro12980 Vaccinium macrocarpon HOM05D000228 ORTHO05D001545 5.7e-15 83.6 46 82.6
SGA_v2.0_scaffold110G31200 Striga asiatica HOM05D000228 ORTHO05D001545 2.2e-14 81.6 46 82.6
TAR623G0006 Trochodendron aralioides HOM05D000228 ORTHO05D001545 2.8e-14 81.3 46 80.4
PSO017G3640 Papaver somniferum HOM05D000228 ORTHO05D001545 4.8e-14 80.5 46 80.4
PSO384G5084 Papaver somniferum HOM05D000228 ORTHO05D001545 4.8e-14 80.5 46 82.6
Aqoxy4G03122 Aquilegia oxysepala HOM05D000228 ORTHO05D001545 6.3e-14 80.1 46 76.1
PSO699G0040 Papaver somniferum HOM05D000228 ORTHO05D001545 1.1e-13 79.3 46 80.4
Ciclev10027681m.g Citrus clementina HOM05D000228 ORTHO05D001545 1.8e-13 78.6 57 71.9
DCAR_018871 Daucus carota HOM05D000228 ORTHO05D001545 1.8e-13 78.6 46 82.6
Oeu047346.1 Olea europaea HOM05D000228 ORTHO05D001545 1.8e-13 78.6 58 72.4
ATR0594G163 Amborella trichopoda HOM05D000228 ORTHO05D001545 2.4e-13 78.2 46 78.3
GSVIVG01025079001 Vitis vinifera HOM05D000228 ORTHO05D001545 2.4e-13 78.2 48 79.2
AagrBONN_evm.TU.Sc2ySwM_362.2196 Anthoceros agrestis HOM05D000228 ORTHO05D001545 3.1e-13 77.8 46 80.4
SEGI_33812 Sequoiadendron giganteum HOM05D000228 ORTHO05D021177 3.1e-13 77.8 46 76.1
ClCG03G002140 Citrullus lanatus HOM05D000228 ORTHO05D001545 5.3e-13 77.0 52 76.9
MELO3C026854.2 Cucumis melo HOM05D000228 ORTHO05D001545 5.3e-13 77.0 52 76.9
CsaV3_1G012790 Cucumis sativus L. HOM05D000228 ORTHO05D001545 5.3e-13 77.0 52 76.9
Dinv27602 Davidia involucrata HOM05D000228 ORTHO05D001545 5.3e-13 77.0 49 75.5
Cc00_g14860 Coffea canephora HOM05D000228 ORTHO05D001545 6.9e-13 76.6 45 80.0
MD03G1106800 Malus domestica HOM05D000228 ORTHO05D001545 6.9e-13 76.6 51 72.5
Nn2g12369 Nelumbo nucifera HOM05D000228 ORTHO05D001545 6.9e-13 76.6 46 78.3
MSTRG.17722 Avicennia marina HOM05D000228 ORTHO05D001545 1.2e-12 75.9 46 76.1
Atru.chr3.3761 Acer truncatum HOM05D000228 ORTHO05D001545 2.0e-12 75.1 57 68.4
arahy.Tifrunner.gnm1.ann1.E1FMMY Arachis hypogaea HOM05D000228 ORTHO05D001545 2.0e-12 75.1 53 73.6
arahy.Tifrunner.gnm1.ann1.NH5KQA Arachis hypogaea HOM05D000228 ORTHO05D001545 2.0e-12 75.1 53 73.6
Eucgr.J02108 Eucalyptus grandis HOM05D000228 ORTHO05D001545 2.0e-12 75.1 53 71.7
Lj1g0011731 Lotus japonicus HOM05D000228 ORTHO05D001545 2.0e-12 75.1 53 71.7
Sabra16G0221600 Salix brachista HOM05D000228 ORTHO05D001545 2.0e-12 75.1 53 71.7
Lsat_1_v5_gn_9_21100 Lactuca sativa HOM05D000228 ORTHO05D001545 2.6e-12 74.7 53 71.7
Lalb_Chr01g0003921 Lupinus albus HOM05D000228 ORTHO05D001545 2.6e-12 74.7 53 71.7
PGR119G1503 Punica granatum HOM05D000228 ORTHO05D001545 2.6e-12 74.7 52 73.1
TWI75G1460 Tripterygium wilfordii HOM05D000228 ORTHO05D001545 2.6e-12 74.7 52 73.1
Prupe.6G089600 Prunus persica HOM05D000228 ORTHO05D001545 3.4e-12 74.3 50 72.0
QL06p007447 Quercus lobata HOM05D000228 ORTHO05D001545 3.4e-12 74.3 53 69.8
QL93p0200_0051 Quercus lobata HOM05D000228 ORTHO05D001545 3.4e-12 74.3 53 69.8
Sc19g0005360 Simmondsia chinensis HOM05D000228 ORTHO05D001545 3.4e-12 74.3 54 72.2
Haze_23976 Corylus avellana HOM05D000228 ORTHO05D001545 4.5e-12 73.9 53 69.8
FvH4_3g34290 Fragaria vesca HOM05D000228 ORTHO05D001545 4.5e-12 73.9 53 67.9
FAN16G3688 Fragaria x ananassa HOM05D000228 ORTHO05D001545 4.5e-12 73.9 53 67.9
FAN21G2820 Fragaria x ananassa HOM05D000228 ORTHO05D001545 4.5e-12 73.9 53 67.9
Medtr4g061700 Medicago truncatula HOM05D000228 ORTHO05D001545 4.5e-12 73.9 53 69.8
Psat7g221400 Pisum sativum HOM05D000228 ORTHO05D001545 4.5e-12 73.9 53 69.8
Sed0007851 Sechium edule HOM05D000228 ORTHO05D001545 4.5e-12 73.9 52 71.2
ECA247G0560 Erigeron canadensis HOM05D000228 ORTHO05D001545 5.9e-12 73.6 53 69.8
HanXRQChr08g0230641 Helianthus annuus HOM05D000228 ORTHO05D001545 5.9e-12 73.6 53 71.7
Lsat_1_v5_gn_2_6980 Lactuca sativa HOM05D000228 ORTHO05D001545 5.9e-12 73.6 53 69.8
RcHm_v2.0_Chr5g0061861 Rosa chinensis HOM05D000228 ORTHO05D001545 5.9e-12 73.6 53 67.9
Atru.chr3.3763 Acer truncatum HOM05D000228 ORTHO05D001545 7.7e-12 73.2 57 66.7
Ca_19216_v3 Cicer arietinum L. HOM05D000228 ORTHO05D001545 1.0e-11 72.8 53 67.9
AUR62035701 Chenopodium quinoa HOM05D000228 ORTHO05D001545 1.3e-11 72.4 53 69.8
MD09G1157000 Malus domestica HOM05D000228 ORTHO05D001545 1.3e-11 72.4 53 67.9
Potri.001G341900 Populus trichocarpa HOM05D000228 ORTHO05D001545 1.7e-11 72.0 53 66.0
CiPaw.14G074800 Carya illinoinensis HOM05D000228 ORTHO05D001545 2.2e-11 71.6 53 69.8
ECA233G4378 Erigeron canadensis HOM05D000228 ORTHO05D001545 2.2e-11 71.6 53 67.9
FAN11G3166 Fragaria x ananassa HOM05D000228 ORTHO05D001545 2.2e-11 71.6 51 68.6
Medtr4g061800 Medicago truncatula HOM05D000228 ORTHO05D001545 2.2e-11 71.6 53 67.9
THA.LOC104810826 Tarenaya hassleriana HOM05D000228 ORTHO05D001545 2.2e-11 71.6 49 75.5
TPR.G2993 Trifolium pratense HOM05D000228 ORTHO05D001545 2.2e-11 71.6 53 67.9
Aqoxy4G03124 Aquilegia oxysepala HOM05D000228 ORTHO05D001545 2.9e-11 71.2 46 69.6
Cfa011405 Carpinus fangiana HOM05D000228 ORTHO05D001545 3.8e-11 70.9 53 66.0
HPP92_005963 Vanilla planifolia HOM05D000228 ORTHO05D001545 3.8e-11 70.9 48 72.9
AUR62025018 Chenopodium quinoa HOM05D000228 ORTHO05D001545 5.0e-11 70.5 55 63.6
COL.COLO4_18403 Corchorus olitorius HOM05D000228 ORTHO05D001545 5.0e-11 70.5 57 63.2
Glyma.11G147317 Glycine max HOM05D000228 ORTHO05D001545 6.5e-11 70.1 55 61.8
Gohir.A03G036100 Gossypium hirsutum HOM05D000228 ORTHO05D001545 6.5e-11 70.1 57 63.2
Gohir.D03G132200 Gossypium hirsutum HOM05D000228 ORTHO05D001545 6.5e-11 70.1 57 63.2
Aa31LG1G12160 Aethionema arabicum HOM05D000228 ORTHO05D001545 1.1e-10 69.3 49 73.5
Aa31LG1G12170 Aethionema arabicum HOM05D000228 ORTHO05D001545 1.1e-10 69.3 49 73.5
Gorai.003G139100 Gossypium raimondii HOM05D000228 ORTHO05D001545 1.1e-10 69.3 57 61.4
HanXRQChr04g0106851 Helianthus annuus HOM05D000228 ORTHO05D001545 1.1e-10 69.3 53 69.8
Manes.17G000400 Manihot esculenta HOM05D000228 ORTHO05D001545 1.4e-10 68.9 53 69.8
EL10Ac1g02243 Beta vulgaris HOM05D000228 ORTHO05D001545 1.9e-10 68.6 54 64.8
EL10Ac3g06609 Beta vulgaris HOM05D000228 ORTHO05D001545 1.9e-10 68.6 54 63.0
VMungo1127G1617 Vigna mungo HOM05D000228 ORTHO05D001545 1.9e-10 68.6 52 61.5
Ah.04g153590 Amaranthus hybridus HOM05D000228 ORTHO05D001545 2.5e-10 68.2 53 66.0
Cpa.g.sc7.210 Carica papaya HOM05D000228 ORTHO05D001545 2.5e-10 68.2 48 64.6
Cre03.g165750 Chlamydomonas reinhardtii HOM05D000228 ORTHO05D001545 2.5e-10 68.2 45 68.9
Phvul.011G070100 Phaseolus vulgaris HOM05D000228 ORTHO05D001545 2.5e-10 68.2 51 62.7
Carub.0008s2074 Capsella rubella HOM05D000228 ORTHO05D001545 3.2e-10 67.8 50 68.0
AL8G36630 Arabidopsis lyrata HOM05D000228 ORTHO05D001545 4.2e-10 67.4 50 68.0
CANSAT56G4454 Cannabis sativa HOM05D000228 ORTHO05D001545 4.2e-10 67.4 52 67.3
AUR62006512 Chenopodium quinoa HOM05D000228 ORTHO05D001545 4.2e-10 67.4 55 61.8
COL.COLO4_14804 Corchorus olitorius HOM05D000228 ORTHO05D001545 4.2e-10 67.4 57 59.6
Thhalv10012446m.g Eutrema salsugineum HOM05D000228 ORTHO05D001545 4.2e-10 67.4 48 72.9
Os04g0492300 Oryza sativa ssp. japonica HOM05D000228 ORTHO05D001545 4.2e-10 67.4 51 66.7
Thecc.03G012000 Theobroma cacao HOM05D000228 ORTHO05D001545 4.2e-10 67.4 57 61.4
AT5G60040 Arabidopsis thaliana HOM05D000228 ORTHO05D001545 5.5e-10 67.0 50 68.0
Duzib150G0751 Durio zibethinus HOM05D000228 ORTHO05D001545 7.2e-10 66.6 57 59.6
FvH4_6g15630 Fragaria vesca HOM05D000228 ORTHO05D001545 7.2e-10 66.6 53 60.4
FAN14G3914 Fragaria x ananassa HOM05D000228 ORTHO05D001545 7.2e-10 66.6 53 60.4
Pp3c17_4860 Physcomitrium patens HOM05D000228 ORTHO05D001545 7.2e-10 66.6 47 68.1
CARHR273660 Cardamine hirsuta HOM05D000228 ORTHO05D001545 1.2e-09 65.9 49 67.3
TPR.G8519 Trifolium pratense HOM05D000228 ORTHO05D001545 1.2e-09 65.9 49 69.4
vmacro14493 Vaccinium macrocarpon HOM05D000228 ORTHO05D001545 1.2e-09 65.9 35 82.9
BcaB05g22610 Brassica carinata HOM05D000228 ORTHO05D001545 1.6e-09 65.5 50 70.0
A02p06630 Brassica napus HOM05D000228 ORTHO05D001545 1.6e-09 65.5 50 70.0
C02p11920 Brassica napus HOM05D000228 ORTHO05D001545 1.6e-09 65.5 50 70.0
Sp6g21700 Schrenkiella parvula HOM05D000228 ORTHO05D001545 1.6e-09 65.5 49 67.3
Zm00001eb078830 Zea mays HOM05D000228 ORTHO05D001545 2.7e-09 64.7 61 54.1
SMO143G0104 Selaginella moellendorffii HOM05D000228 ORTHO05D001545 3.6e-09 64.3 46 58.7
Mapoly0051s0017 Marchantia polymorpha HOM05D000228 ORTHO05D001545 4.7e-09 63.9 47 72.3
BolC2t07289H Brassica oleracea HOM05D000228 ORTHO05D001545 7.9e-09 63.2 49 69.4
BraA02t05745Z Brassica rapa HOM05D000228 ORTHO05D001545 7.9e-09 63.2 49 69.4
Lsat_1_v5_gn_6_74221 Lactuca sativa HOM05D000228 ORTHO05D021177 1.0e-08 62.8 58 51.7
MCO05G255 Micromonas commoda HOM05D000228 ORTHO05D001545 8.8e-08 59.7 46 63.0
FAN02G2221 Fragaria x ananassa HOM05D000228 ORTHO05D001545 4.4e-07 57.4 44 63.6


User provided reference genes

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