Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400043692 Solanum tuberosum HOM05D002077 ORTHO05D000818 6.2e-76 287.3 141 100.0
PGSC0003DMG400014329 Solanum tuberosum HOM05D002077 ORTHO05D000818 1.5e-58 229.6 133 84.2
PGSC0003DMG400030222 Solanum tuberosum HOM05D002077 ORTHO05D000818 1.5e-58 229.6 134 83.6
Solyc03g025940.3 Solanum lycopersicum HOM05D002077 ORTHO05D000818 7.6e-58 227.3 134 82.8
Sopen03g004760 Solanum pennellii HOM05D002077 ORTHO05D000818 3.8e-57 224.9 134 82.1
PGSC0003DMG402014331 Solanum tuberosum HOM05D002077 ORTHO05D000818 6.7e-46 187.6 120 73.3
PGSC0003DMG401014331 Solanum tuberosum HOM05D002077 ORTHO05D000818 1.1e-43 180.3 133 64.7
Nitab4.5_0003365g0050 Nicotiana tabacum HOM05D002077 ORTHO05D000818 4.6e-39 164.9 126 62.7
PGSC0003DMG401014333 Solanum tuberosum HOM05D002077 ORTHO05D000818 7.9e-39 164.1 126 63.5
Peaxi162Scf00915g00025 Petunia axillaris HOM05D002077 ORTHO05D000818 1.0e-38 163.7 120 65.0
CAN.G913.3 Capsicum annuum HOM05D002077 ORTHO05D000818 1.3e-38 163.3 120 64.2
Nitab4.5_0000716g0180 Nicotiana tabacum HOM05D002077 ORTHO05D000818 1.8e-38 162.9 120 65.0
PGSC0003DMG403014333 Solanum tuberosum HOM05D002077 ORTHO05D000818 3.9e-38 161.8 120 65.0
Solyc03g025920.4 Solanum lycopersicum HOM05D002077 ORTHO05D000818 6.7e-38 161.0 120 64.2
Sopen03g004730 Solanum pennellii HOM05D002077 ORTHO05D000818 6.7e-38 161.0 120 64.2
Sopen03g004750 Solanum pennellii HOM05D002077 ORTHO05D000818 4.3e-37 158.3 133 58.6
Solyc03g025930.4 Solanum lycopersicum HOM05D002077 ORTHO05D000818 7.4e-37 157.5 133 58.6
Actinidia34102 Actinidia chinensis HOM05D002077 ORTHO05D000818 1.6e-36 156.4 121 62.0
Dinv28453 Davidia involucrata HOM05D002077 ORTHO05D000818 4.8e-36 154.8 120 63.3
RcHm_v2.0_Chr1g0377111 Rosa chinensis HOM05D002077 ORTHO05D000818 1.1e-35 153.7 120 61.7
CiPaw.03G105400 Carya illinoinensis HOM05D002077 ORTHO05D000818 3.1e-35 152.1 120 60.8
COL.COLO4_14296 Corchorus olitorius HOM05D002077 ORTHO05D000818 4.1e-35 151.8 120 60.8
FvH4_7g29350 Fragaria vesca HOM05D002077 ORTHO05D000818 4.1e-35 151.8 120 60.0
FAN06G1288 Fragaria x ananassa HOM05D002077 ORTHO05D006729 4.1e-35 151.8 120 60.0
FAN06G1718 Fragaria x ananassa HOM05D002077 ORTHO05D006729 4.1e-35 151.8 120 60.0
Manes.06G146400 Manihot esculenta HOM05D002077 ORTHO05D000818 4.1e-35 151.8 120 61.7
Cc02_g03120 Coffea canephora HOM05D002077 ORTHO05D000818 5.3e-35 151.4 120 61.7
FAN03G1828 Fragaria x ananassa HOM05D002077 ORTHO05D006729 1.5e-34 149.8 120 60.0
Prupe.2G293200 Prunus persica HOM05D002077 ORTHO05D000818 1.5e-34 149.8 120 59.2
Thecc.03G175300 Theobroma cacao HOM05D002077 ORTHO05D000818 2.0e-34 149.4 120 60.0
Dinv35206 Davidia involucrata HOM05D002077 ORTHO05D000818 2.6e-34 149.1 120 60.8
TWI14G1216 Tripterygium wilfordii HOM05D002077 ORTHO05D000818 2.6e-34 149.1 120 60.8
Ciclev10005501m.g Citrus clementina HOM05D002077 ORTHO05D000818 4.5e-34 148.3 120 60.0
Haze_13726 Corylus avellana HOM05D002077 ORTHO05D000818 4.5e-34 148.3 120 60.0
Rhsim03G0179600 Rhododendron simsii HOM05D002077 ORTHO05D000818 7.6e-34 147.5 120 58.3
Gohir.A09G041000 Gossypium hirsutum HOM05D002077 ORTHO05D000818 1.0e-33 147.1 120 58.3
Gohir.D09G041900 Gossypium hirsutum HOM05D002077 ORTHO05D000818 1.3e-33 146.7 120 58.3
Gorai.006G048100 Gossypium raimondii HOM05D002077 ORTHO05D000818 1.3e-33 146.7 120 58.3
Lj8A25T67 Lonicera japonica HOM05D002077 ORTHO05D000818 1.3e-33 146.7 120 60.0
arahy.Tifrunner.gnm1.ann1.6H6H67 Arachis hypogaea HOM05D002077 ORTHO05D000818 1.7e-33 146.4 120 57.5
arahy.Tifrunner.gnm1.ann1.KCRD8X Arachis hypogaea HOM05D002077 ORTHO05D000818 1.7e-33 146.4 120 57.5
Cfa008309 Carpinus fangiana HOM05D002077 ORTHO05D000818 1.7e-33 146.4 120 60.0
FAN01G1848 Fragaria x ananassa HOM05D002077 ORTHO05D000818 1.7e-33 146.4 119 58.8
QL09p014520 Quercus lobata HOM05D002077 ORTHO05D000818 2.2e-33 146.0 120 59.2
CSS0043143 Camellia sinensis var. sinensis HOM05D002077 ORTHO05D000818 2.9e-33 145.6 120 58.3
Cpa.g.sc107.40 Carica papaya HOM05D002077 ORTHO05D000818 5.0e-33 144.8 113 61.9
Duzib205G0590 Durio zibethinus HOM05D002077 ORTHO05D000818 5.0e-33 144.8 112 60.7
Glyma.20G157500 Glycine max HOM05D002077 ORTHO05D000818 6.5e-33 144.4 120 57.5
Hma1.2p1_2482F.1_g323020 Hydrangea macrophylla HOM05D002077 ORTHO05D000818 6.5e-33 144.4 110 61.8
Atru.chr1.476 Acer truncatum HOM05D002077 ORTHO05D000818 1.4e-32 143.3 120 58.3
Psat6g199880 Pisum sativum HOM05D002077 ORTHO05D000818 1.9e-32 142.9 133 51.9
TPR.G14327 Trifolium pratense HOM05D002077 ORTHO05D000818 2.5e-32 142.5 120 57.5
DCAR_009358 Daucus carota HOM05D002077 ORTHO05D000818 3.2e-32 142.1 120 56.7
Medtr1g100697 Medicago truncatula HOM05D002077 ORTHO05D000818 3.2e-32 142.1 120 56.7
GSVIVG01010544001 Vitis vinifera HOM05D002077 ORTHO05D000818 3.2e-32 142.1 120 55.8
Phvul.007G069000 Phaseolus vulgaris HOM05D002077 ORTHO05D000818 4.2e-32 141.7 120 56.7
Hma1.2p1_3140F.1_g333050 Hydrangea macrophylla HOM05D002077 ORTHO05D000818 5.5e-32 141.4 120 56.7
VMungo0720G0161 Vigna mungo HOM05D002077 ORTHO05D000818 5.5e-32 141.4 121 57.9
THA.LOC104824394 Tarenaya hassleriana HOM05D002077 ORTHO05D000818 7.2e-32 141.0 133 51.1
Ca_10779_v3 Cicer arietinum L. HOM05D002077 ORTHO05D000818 9.3e-32 140.6 120 55.8
ECA232G3548 Erigeron canadensis HOM05D002077 ORTHO05D000818 9.3e-32 140.6 121 54.5
HanXRQChr15g0495591 Helianthus annuus HOM05D002077 ORTHO05D000818 1.2e-31 140.2 120 56.7
SalBow2G3420 Salvia bowleyana HOM05D002077 ORTHO05D000818 1.2e-31 140.2 121 53.7
Glyma.10G236900 Glycine max HOM05D002077 ORTHO05D000818 1.6e-31 139.8 118 56.8
Lj5g0027705 Lotus japonicus HOM05D002077 ORTHO05D000818 2.1e-31 139.4 120 54.2
MD01G1199600 Malus domestica HOM05D002077 ORTHO05D000818 6.1e-31 137.9 121 55.4
Eucgr.A02798 Eucalyptus grandis HOM05D002077 ORTHO05D000818 7.9e-31 137.5 120 55.0
Eucgr.A02799 Eucalyptus grandis HOM05D002077 ORTHO05D000818 7.9e-31 137.5 119 55.5
Lalb_Chr06g0161071 Lupinus albus HOM05D002077 ORTHO05D000818 7.9e-31 137.5 121 53.7
Migut.F01126 Erythranthe guttata HOM05D002077 ORTHO05D000818 1.0e-30 137.1 120 51.7
Lsat_1_v5_gn_2_131821 Lactuca sativa HOM05D002077 ORTHO05D000818 1.0e-30 137.1 114 57.0
Medtr1g100707 Medicago truncatula HOM05D002077 ORTHO05D000818 1.0e-30 137.1 120 55.8
vmacro06694 Vaccinium macrocarpon HOM05D002077 ORTHO05D000818 1.3e-30 136.7 120 55.8
Potri.012G137700 Populus trichocarpa HOM05D002077 ORTHO05D000818 3.0e-30 135.6 120 54.2
Oeu021781.1 Olea europaea HOM05D002077 ORTHO05D000818 3.9e-30 135.2 123 56.1
SGA_v2.0_scaffold10G05344 Striga asiatica HOM05D002077 ORTHO05D000818 8.7e-30 134.0 112 53.6
AL5G28390 Arabidopsis lyrata HOM05D002077 ORTHO05D000818 1.1e-29 133.7 113 54.0
Thhalv10010519m.g Eutrema salsugineum HOM05D002077 ORTHO05D000818 1.1e-29 133.7 113 54.0
HanXRQChr07g0207061 Helianthus annuus HOM05D002077 ORTHO05D000818 1.1e-29 133.7 118 53.4
Aa31LG4G17390 Aethionema arabicum HOM05D002077 ORTHO05D000818 1.5e-29 133.3 113 54.0
MBI18_g44743_MAGBIO Magnolia biondii HOM05D002077 ORTHO05D000818 1.5e-29 133.3 120 53.3
Carub.0005s1505 Capsella rubella HOM05D002077 ORTHO05D000818 1.9e-29 132.9 113 53.1
BcaB05g22980 Brassica carinata HOM05D002077 ORTHO05D000818 4.3e-29 131.7 122 51.6
ECA238G3926 Erigeron canadensis HOM05D002077 ORTHO05D000818 4.3e-29 131.7 110 54.5
BcaC09g49912 Brassica carinata HOM05D002077 ORTHO05D000818 9.7e-29 130.6 122 50.8
A01p25170 Brassica napus HOM05D002077 ORTHO05D000818 9.7e-29 130.6 122 50.8
BolC1t03074H Brassica oleracea HOM05D002077 ORTHO05D000818 9.7e-29 130.6 122 50.8
BraA01t02425Z Brassica rapa HOM05D002077 ORTHO05D000818 9.7e-29 130.6 122 50.8
Sp5g13170 Schrenkiella parvula HOM05D002077 ORTHO05D000818 9.7e-29 130.6 113 52.2
CARHR157690 Cardamine hirsuta HOM05D002077 ORTHO05D000818 1.3e-28 130.2 113 51.3
TAR636G1697 Trochodendron aralioides HOM05D002077 ORTHO05D000818 1.3e-28 130.2 120 49.2
Potri.015G139700 Populus trichocarpa HOM05D002077 ORTHO05D000818 1.6e-28 129.8 120 52.5
AT3G48880 Arabidopsis thaliana HOM05D002077 ORTHO05D000818 2.2e-28 129.4 113 51.3
C01p31370 Brassica napus HOM05D002077 ORTHO05D000818 2.2e-28 129.4 122 50.0
Nn1g01424 Nelumbo nucifera HOM05D002077 ORTHO05D000818 2.2e-28 129.4 120 50.0
Sabra15G0150400 Salix brachista HOM05D002077 ORTHO05D000818 2.2e-28 129.4 133 50.4
Aa31LG11G3080 Aethionema arabicum HOM05D002077 ORTHO05D000818 3.1e-27 125.6 114 53.5
C08p23850 Brassica napus HOM05D002077 ORTHO05D000818 2.0e-26 122.9 113 50.4
PSO063G0361 Papaver somniferum HOM05D002077 ORTHO05D000818 2.0e-26 122.9 120 46.7
PSO782G4919 Papaver somniferum HOM05D002077 ORTHO05D000818 2.0e-26 122.9 120 46.7
BcaC07g39363 Brassica carinata HOM05D002077 ORTHO05D000818 3.4e-26 122.1 113 50.4
BolC8t50011H Brassica oleracea HOM05D002077 ORTHO05D000818 1.0e-25 120.6 113 49.6
CAN.G1154.4 Capsicum annuum HOM05D002077 ORTHO05D000818 1.1e-24 117.1 90 58.9
PGSC0003DMG400016751 Solanum tuberosum HOM05D002077 ORTHO05D000818 1.1e-24 117.1 95 61.1
A06p18870 Brassica napus HOM05D002077 ORTHO05D000818 2.5e-24 115.9 113 47.8
Sp2g23500 Schrenkiella parvula HOM05D002077 ORTHO05D000818 5.5e-24 114.8 112 50.9
Os10g0502900 Oryza sativa ssp. japonica HOM05D002077 ORTHO05D000818 7.2e-24 114.4 110 47.3
RcHm_v2.0_Chr1g0377091 Rosa chinensis HOM05D002077 ORTHO05D000818 1.2e-23 113.6 128 49.2
Solyc03g096620.3 Solanum lycopersicum HOM05D002077 ORTHO05D000818 1.2e-23 113.6 149 44.3
HPP92_008461 Vanilla planifolia HOM05D002077 ORTHO05D000818 1.2e-23 113.6 120 45.0
FvH4_7g29340 Fragaria vesca HOM05D002077 ORTHO05D000818 1.6e-23 113.2 128 49.2
Solyc03g026410.3 Solanum lycopersicum HOM05D002077 ORTHO05D000818 2.7e-23 112.5 218 35.8
FAN10G4305 Fragaria x ananassa HOM05D002077 ORTHO05D000818 6.1e-23 111.3 132 49.2
Thhalv10005418m.g Eutrema salsugineum HOM05D002077 ORTHO05D000818 7.9e-23 110.9 111 48.6
HPP92_008435 Vanilla planifolia HOM05D002077 ORTHO05D000818 1.4e-22 110.2 127 41.7
FAN03G0915 Fragaria x ananassa HOM05D002077 ORTHO05D000818 3.0e-22 109.0 128 47.7
Zm00001eb044180 Zea mays HOM05D002077 ORTHO05D000818 6.7e-22 107.8 110 45.5
Hma1.2p1_2094F.1_g313920 Hydrangea macrophylla HOM05D002077 ORTHO05D000818 8.8e-22 107.5 120 47.5
Prupe.2G293100 Prunus persica HOM05D002077 ORTHO05D000818 4.4e-21 105.1 116 49.1
Aqoxy5G03957 Aquilegia oxysepala HOM05D002077 ORTHO05D000818 9.7e-21 104.0 120 42.5
Thhalv10016006m.g Eutrema salsugineum HOM05D002077 ORTHO05D000818 2.2e-20 102.8 113 46.0
Solyc03g062810.1 Solanum lycopersicum HOM05D002077 ORTHO05D000818 3.7e-20 102.1 83 56.6
Thhalv10015761m.g Eutrema salsugineum HOM05D002077 ORTHO05D000818 4.8e-20 101.7 110 44.5
Aqoxy3G02725 Aquilegia oxysepala HOM05D002077 ORTHO05D000818 5.3e-19 98.2 130 38.5
Thhalv10015508m.g Eutrema salsugineum HOM05D002077 ORTHO05D000818 6.9e-19 97.8 113 43.4
TPR.G14336 Trifolium pratense HOM05D002077 ORTHO05D000818 1.2e-18 97.1 111 40.5
CAN.G913.4 Capsicum annuum HOM05D000541 ORTHO05D000818 1.5e-18 96.7 69 62.3
BcaB01g00773 Brassica carinata HOM05D002077 ORTHO05D000818 2.0e-18 96.3 113 43.4
Medtr0013s0100 Medicago truncatula HOM05D002077 ORTHO05D000818 2.6e-18 95.9 104 43.3
Thhalv10005421m.g Eutrema salsugineum HOM05D002077 ORTHO05D000818 3.4e-18 95.5 107 44.9
MD07G1267400 Malus domestica HOM05D002077 ORTHO05D000818 5.9e-18 94.7 119 46.2
Medtr4g099030 Medicago truncatula HOM05D002077 ORTHO05D000818 2.9e-17 92.4 129 37.2
CSS0014052 Camellia sinensis var. sinensis HOM05D002077 ORTHO05D000818 1.4e-16 90.1 108 39.8
RcHm_v2.0_Chr1g0377061 Rosa chinensis HOM05D002077 ORTHO05D000818 1.4e-16 90.1 126 44.4
HPP92_008441 Vanilla planifolia HOM05D002077 ORTHO05D000818 2.5e-16 89.4 96 44.8
PGR042G3255 Punica granatum HOM05D002077 ORTHO05D000818 5.5e-16 88.2 86 50.0
Solyc01g150123.1 Solanum lycopersicum HOM05D002077 ORTHO05D000818 7.2e-16 87.8 54 79.6
QL09p041417 Quercus lobata HOM05D002077 ORTHO05D000818 1.8e-14 83.2 124 37.1
QL12p002854 Quercus lobata HOM05D002077 ORTHO05D000818 1.8e-14 83.2 118 38.1
Solyc01g015180.1 Solanum lycopersicum HOM05D002077 ORTHO05D000818 3.0e-14 82.4 73 61.6
TPR.G34129 Trifolium pratense HOM05D002077 ORTHO05D000818 3.9e-14 82.0 109 39.4
CARHR189810 Cardamine hirsuta HOM05D002077 ORTHO05D000818 5.2e-14 81.6 114 38.6
Medtr1g100713 Medicago truncatula HOM05D002077 ORTHO05D000818 5.2e-14 81.6 109 38.5
CSS0046422 Camellia sinensis var. sinensis HOM05D002077 ORTHO05D000818 4.4e-13 78.6 62 58.1
Solyc06g009250.2 Solanum lycopersicum HOM05D002077 ORTHO05D000818 4.4e-13 78.6 74 54.1
THA.LOC104806991 Tarenaya hassleriana HOM05D002077 ORTHO05D000818 4.4e-13 78.6 114 35.1
Psat7g237160 Pisum sativum HOM05D002077 ORTHO05D000818 1.7e-12 76.6 99 39.4
FAN10G2215 Fragaria x ananassa HOM05D002077 ORTHO05D000818 2.2e-12 76.3 122 41.8
Thhalv10015605m.g Eutrema salsugineum HOM05D002077 ORTHO05D000818 3.7e-12 75.5 114 38.6
Psat7g237200 Pisum sativum HOM05D002077 ORTHO05D000818 4.8e-12 75.1 99 38.4
FAN03G1381 Fragaria x ananassa HOM05D002077 ORTHO05D000818 6.3e-12 74.7 120 40.0
Manes.02G024600 Manihot esculenta HOM05D002077 ORTHO05D000818 1.6e-10 70.1 115 33.0
THA.LOC104814386 Tarenaya hassleriana HOM05D002077 ORTHO05D000818 2.6e-10 69.3 124 32.3
CSS0043009 Camellia sinensis var. sinensis HOM05D002077 ORTHO05D000818 4.5e-10 68.6 88 38.6
Aqoxy7G01053 Aquilegia oxysepala HOM05D002077 ORTHO05D000818 7.7e-10 67.8 97 39.2
Lj1g0005001 Lotus japonicus HOM05D002077 ORTHO05D000818 7.7e-10 67.8 113 36.3
Medtr1g029330 Medicago truncatula HOM05D002077 ORTHO05D000818 7.7e-10 67.8 126 35.7
Ciclev10021301m.g Citrus clementina HOM05D002077 ORTHO05D000818 1.3e-09 67.0 115 33.0
Glyma.02G057300 Glycine max HOM05D002077 ORTHO05D000818 3.8e-09 65.5 118 34.7
Glyma.01G100400 Glycine max HOM05D002077 ORTHO05D000818 8.5e-09 64.3 118 33.9
VMungo1383G0582 Vigna mungo HOM05D005855 ORTHO05D000818 1.5e-08 63.5 146 30.8
RcHm_v2.0_Chr1g0377081 Rosa chinensis HOM05D002077 ORTHO05D000818 3.2e-08 62.4 61 52.5
Sopen03g026740 Solanum pennellii HOM05D002077 ORTHO05D000818 3.2e-08 62.4 58 56.9
THA.LOC104814426 Tarenaya hassleriana HOM05D002077 ORTHO05D000818 3.2e-08 62.4 117 27.4
TPR.G14717 Trifolium pratense HOM05D002077 ORTHO05D000818 3.2e-08 62.4 113 32.7
Phvul.008G073600 Phaseolus vulgaris HOM05D002077 ORTHO05D000818 7.2e-08 61.2 104 37.5
PGSC0003DMG402014333 Solanum tuberosum HOM05D002077 ORTHO05D000818 3.6e-07 58.9 44 68.2
Glyma.15G192600 Glycine max HOM05D002077 ORTHO05D000818 4.7e-07 58.5 107 33.6
Aqoxy4G03043 Aquilegia oxysepala HOM05D002273 ORTHO05D000818 6.1e-07 58.2 109 32.1
Aqoxy2G03726 Aquilegia oxysepala HOM05D002273 ORTHO05D000818 4.0e-06 55.5 81 29.6
Carub.0003s0214 Capsella rubella HOM05D002077 ORTHO05D000818 8.8e-06 54.3 136 26.5


User provided reference genes

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