Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400043614 Solanum tuberosum HOM05D000203 ORTHO05D000135 1.6e-77 292.7 150 100.0
PGSC0003DMG400038182 Solanum tuberosum HOM05D000203 ORTHO05D000135 1.7e-52 209.5 166 69.3
PGSC0003DMG400043218 Solanum tuberosum HOM05D000203 ORTHO05D000135 2.0e-40 169.5 142 65.5
PGSC0003DMG400039537 Solanum tuberosum HOM05D000203 ORTHO05D000135 9.6e-27 124.0 179 43.6
CAN.G1038.24 Capsicum annuum HOM05D000203 ORTHO05D000135 4.8e-26 121.7 147 45.6
CAN.G1038.27 Capsicum annuum HOM05D000203 ORTHO05D000135 1.8e-25 119.8 177 41.8
CAN.G1038.26 Capsicum annuum HOM05D000203 ORTHO05D000135 5.8e-24 114.8 177 39.0
CAN.G900.1 Capsicum annuum HOM05D000203 ORTHO05D000135 8.4e-23 110.9 175 40.0
Peaxi162Scf01553g00012 Petunia axillaris HOM05D000203 ORTHO05D000135 1.3e-20 103.6 164 41.5
Peaxi162Scf00920g00027 Petunia axillaris HOM05D000203 ORTHO05D000135 8.7e-20 100.9 172 37.8
Nitab4.5_0002207g0020 Nicotiana tabacum HOM05D000203 ORTHO05D000135 9.7e-19 97.4 171 40.9
PGSC0003DMG400045528 Solanum tuberosum HOM05D000203 ORTHO05D000135 4.8e-18 95.1 131 44.3
CAN.G478.11 Capsicum annuum HOM05D000203 ORTHO05D000135 2.4e-17 92.8 172 39.0
CAN.G478.9 Capsicum annuum HOM05D000203 ORTHO05D000135 3.1e-17 92.4 172 38.4
Nitab4.5_0002207g0010 Nicotiana tabacum HOM05D000203 ORTHO05D000135 3.1e-17 92.4 158 39.2
Nitab4.5_0002210g0020 Nicotiana tabacum HOM05D000203 ORTHO05D000135 9.0e-17 90.9 166 38.0
Nitab4.5_0000592g0440 Nicotiana tabacum HOM05D000203 ORTHO05D000135 1.5e-16 90.1 179 34.6
Peaxi162Scf00104g00193 Petunia axillaris HOM05D000203 ORTHO05D000135 2.0e-16 89.7 169 36.7
Solyc10g018110.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 2.6e-16 89.4 178 34.8
Sopen10g007120 Solanum pennellii HOM05D000203 ORTHO05D000135 4.5e-16 88.6 178 34.3
CAN.G377.22 Capsicum annuum HOM05D000203 ORTHO05D000135 5.9e-16 88.2 172 38.4
Nitab4.5_0002860g0020 Nicotiana tabacum HOM05D000203 ORTHO05D000135 7.6e-16 87.8 179 34.1
Peaxi162Scf00118g01710 Petunia axillaris HOM05D000203 ORTHO05D000135 7.6e-16 87.8 164 38.4
Nitab4.5_0000592g0390 Nicotiana tabacum HOM05D000203 ORTHO05D000135 2.2e-15 86.3 179 35.2
Nitab4.5_0010230g0020 Nicotiana tabacum HOM05D000203 ORTHO05D000135 2.2e-15 86.3 169 36.7
PGSC0003DMG400040848 Solanum tuberosum HOM05D000203 ORTHO05D000135 1.1e-14 84.0 172 35.5
CAN.G2092.1 Capsicum annuum HOM05D000203 ORTHO05D000135 1.9e-14 83.2 172 32.6
Peaxi162Scf00104g00131 Petunia axillaris HOM05D000203 ORTHO05D000135 4.2e-14 82.0 168 36.3
Peaxi162Scf00104g00132 Petunia axillaris HOM05D000203 ORTHO05D000135 4.2e-14 82.0 168 36.3
CAN.G1038.25 Capsicum annuum HOM05D000203 ORTHO05D000135 5.5e-14 81.6 124 37.9
Peaxi162Scf00658g00627 Petunia axillaris HOM05D000203 ORTHO05D000135 5.5e-14 81.6 120 43.3
Solyc06g059780.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 5.5e-14 81.6 172 34.3
PGSC0003DMG400040999 Solanum tuberosum HOM05D000203 ORTHO05D000135 5.5e-14 81.6 172 34.9
CAN.G478.14 Capsicum annuum HOM05D000203 ORTHO05D000135 7.2e-14 81.3 173 35.3
Nitab4.5_0000622g0180 Nicotiana tabacum HOM05D000203 ORTHO05D000135 1.6e-13 80.1 173 33.5
Peaxi162Scf00104g01011 Petunia axillaris HOM05D000203 ORTHO05D000135 2.1e-13 79.7 161 34.8
Solyc01g097850.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 2.1e-13 79.7 172 33.7
Solyc04g056550.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 2.1e-13 79.7 172 35.5
Solyc04g056740.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 2.1e-13 79.7 172 34.9
CAN.G866.37 Capsicum annuum HOM05D000203 ORTHO05D000135 7.9e-13 77.8 179 35.8
Peaxi162Scf00382g00087 Petunia axillaris HOM05D000203 ORTHO05D000135 1.0e-12 77.4 173 32.9
PGSC0003DMG400044457 Solanum tuberosum HOM05D000203 ORTHO05D000135 1.4e-12 77.0 174 33.3
Solyc06g054680.2 Solanum lycopersicum HOM05D000203 ORTHO05D000135 1.8e-12 76.6 172 34.3
PGSC0003DMG400042890 Solanum tuberosum HOM05D000203 ORTHO05D000135 1.8e-12 76.6 165 33.9
CAN.G866.34 Capsicum annuum HOM05D000203 ORTHO05D000135 3.0e-12 75.9 172 36.0
CAN.G1843.5 Capsicum annuum HOM05D000203 ORTHO05D000135 3.9e-12 75.5 160 35.0
PGSC0003DMG400037384 Solanum tuberosum HOM05D000203 ORTHO05D015565 3.9e-12 75.5 181 30.9
PGSC0003DMG400044761 Solanum tuberosum HOM05D000203 ORTHO05D000135 3.9e-12 75.5 172 34.3
CAN.G713.23 Capsicum annuum HOM05D000203 ORTHO05D000135 8.8e-12 74.3 181 33.1
CAN.G866.40 Capsicum annuum HOM05D000203 ORTHO05D000135 1.1e-11 73.9 182 34.1
Solyc10g050900.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 1.1e-11 73.9 164 32.9
CAN.G638.39 Capsicum annuum HOM05D000203 ORTHO05D000135 1.9e-11 73.2 183 33.3
CAN.G713.15 Capsicum annuum HOM05D000203 ORTHO05D000135 1.9e-11 73.2 179 32.4
Nitab4.5_0000592g0400 Nicotiana tabacum HOM05D000203 ORTHO05D000135 1.9e-11 73.2 177 28.8
Nitab4.5_0009635g0020 Nicotiana tabacum HOM05D000203 ORTHO05D000135 2.5e-11 72.8 173 31.2
Sopen10g022580 Solanum pennellii HOM05D000203 ORTHO05D000135 3.3e-11 72.4 152 33.6
Nitab4.5_0000622g0100 Nicotiana tabacum HOM05D000203 ORTHO05D000135 1.7e-10 70.1 153 32.0
Solyc10g050940.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 2.2e-10 69.7 164 30.5
PGSC0003DMG400040226 Solanum tuberosum HOM05D000203 ORTHO05D000135 2.8e-10 69.3 172 30.8
PGSC0003DMG400039674 Solanum tuberosum HOM05D000203 ORTHO05D000135 3.7e-10 68.9 165 30.3
PGSC0003DMG400042688 Solanum tuberosum HOM05D000203 ORTHO05D000135 3.7e-10 68.9 172 33.7
Nitab4.5_0006520g0020 Nicotiana tabacum HOM05D000203 ORTHO05D000135 6.3e-10 68.2 82 48.8
Sopen04g025630 Solanum pennellii HOM05D000203 ORTHO05D000135 1.1e-09 67.4 152 33.6
Solyc10g050950.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 3.1e-09 65.9 152 30.9
PGSC0003DMG400039153 Solanum tuberosum HOM05D000203 ORTHO05D000135 9.1e-09 64.3 159 30.2
Sopen03g006640 Solanum pennellii HOM05D000203 ORTHO05D015565 2.0e-08 63.2 182 29.1
CAN.G1475.12 Capsicum annuum HOM05D000203 ORTHO05D000135 3.4e-08 62.4 95 35.8
PGSC0003DMG400037581 Solanum tuberosum HOM05D000203 ORTHO05D000135 3.4e-08 62.4 159 29.6
Solyc03g033900.1 Solanum lycopersicum HOM05D000203 ORTHO05D015565 4.5e-08 62.0 182 29.7
Cc09_g04710 Coffea canephora HOM05D000203 ORTHO05D000135 7.7e-08 61.2 178 30.3
Sopen01g026420 Solanum pennellii HOM05D000203 ORTHO05D000135 1.0e-07 60.8 148 33.8
Nitab4.5_0000586g0030 Nicotiana tabacum HOM05D000203 ORTHO05D000135 1.7e-07 60.1 69 49.3
Solyc03g033570.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 3.8e-07 58.9 181 29.3
Solyc03g033940.1 Solanum lycopersicum HOM05D000203 ORTHO05D015565 3.8e-07 58.9 182 28.0
Peaxi162Scf00047g02018 Petunia axillaris HOM05D000203 ORTHO05D000135 5.0e-07 58.5 142 32.4
Ciclev10006957m.g Citrus clementina HOM05D000203 ORTHO05D000135 8.5e-07 57.8 184 32.6
Solyc10g018080.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 8.5e-07 57.8 149 29.5
Ciclev10006530m.g Citrus clementina HOM05D000203 ORTHO05D000135 1.1e-06 57.4 176 33.0
Sopen01g041450 Solanum pennellii HOM05D000203 ORTHO05D000135 1.4e-06 57.0 90 37.8
Sopen10g007160 Solanum pennellii HOM05D002655 ORTHO05D002558 1.9e-06 56.6 42 71.4
Sopen06g024440 Solanum pennellii HOM05D000203 ORTHO05D000135 2.5e-06 56.2 95 37.9
Ciclev10007104m.g Citrus clementina HOM05D000203 ORTHO05D000135 4.2e-06 55.5 42 71.4
Solyc10g018070.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 4.2e-06 55.5 150 34.0
Ciclev10006439m.g Citrus clementina HOM05D000203 ORTHO05D000135 5.5e-06 55.1 184 31.0
Ciclev10007010m.g Citrus clementina HOM05D000203 ORTHO05D000135 7.2e-06 54.7 186 30.6
Peaxi162Scf00106g02117 Petunia axillaris HOM05D000203 ORTHO05D000135 7.2e-06 54.7 152 30.9
Peaxi162Scf00272g00226 Petunia axillaris HOM05D000203 ORTHO05D000135 7.2e-06 54.7 151 28.5
Sed0027724 Sechium edule HOM05D000203 ORTHO05D000135 7.2e-06 54.7 41 70.7


User provided reference genes

Program Settings