Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400032551 Solanum tuberosum HOM05D003984 ORTHO05D004740 2.0e-141 505.8 256 100.0
Solyc04g009550.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 1.4e-139 499.6 256 98.0
CAN.G186.31 Capsicum annuum HOM05D003984 ORTHO05D004740 8.7e-137 490.3 256 95.7
Peaxi162Scf00195g00824 Petunia axillaris HOM05D003984 ORTHO05D004740 3.9e-129 464.9 264 89.4
Nitab4.5_0000830g0100 Nicotiana tabacum HOM05D003984 ORTHO05D004740 6.3e-127 457.6 265 86.4
Nitab4.5_0000691g0240 Nicotiana tabacum HOM05D003984 ORTHO05D004740 1.1e-126 456.8 265 89.4
Nitab4.5_0001248g0030 Nicotiana tabacum HOM05D003984 ORTHO05D004740 1.1e-126 456.8 265 86.8
SGA_v2.0_scaffold62G21447 Striga asiatica HOM05D003984 ORTHO05D004740 3.2e-123 445.3 259 86.9
Nitab4.5_0004104g0120 Nicotiana tabacum HOM05D003984 ORTHO05D004740 2.1e-122 442.6 250 90.8
Solyc04g049710.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 4.7e-122 441.4 265 84.5
Peaxi162Scf01024g00120 Petunia axillaris HOM05D003984 ORTHO05D004740 6.1e-122 441.0 264 83.7
Sopen04g019960 Solanum pennellii HOM05D003984 ORTHO05D004740 6.1e-122 441.0 265 84.5
Atru.chr12.610 Acer truncatum HOM05D003984 ORTHO05D004740 1.4e-121 439.9 262 84.0
COL.COLO4_23777 Corchorus olitorius HOM05D003984 ORTHO05D004740 5.7e-120 434.5 260 83.1
RcHm_v2.0_Chr1g0364411 Rosa chinensis HOM05D003984 ORTHO05D004740 9.7e-120 433.7 264 82.2
CiPaw.01G278000 Carya illinoinensis HOM05D003984 ORTHO05D004740 3.7e-119 431.8 264 81.4
QL08p057270 Quercus lobata HOM05D003984 ORTHO05D004740 6.3e-119 431.0 264 81.8
Manes.10G040500 Manihot esculenta HOM05D003984 ORTHO05D004740 1.1e-118 430.3 262 82.4
MD01G1114200 Malus domestica HOM05D003984 ORTHO05D004740 1.4e-118 429.9 264 81.4
Cc09_g02350 Coffea canephora HOM05D003984 ORTHO05D004740 2.4e-118 429.1 264 81.1
Oeu055063.1 Olea europaea HOM05D003984 ORTHO05D004740 2.4e-118 429.1 264 81.8
Thecc.10G065000 Theobroma cacao HOM05D003984 ORTHO05D004740 2.4e-118 429.1 260 82.7
Prupe.2G220800 Prunus persica HOM05D003984 ORTHO05D004740 3.1e-118 428.7 264 80.7
Dinv11820 Davidia involucrata HOM05D003984 ORTHO05D004740 4.1e-118 428.3 264 81.4
Dinv31376 Davidia involucrata HOM05D003984 ORTHO05D004740 4.1e-118 428.3 264 81.8
MD07G1182100 Malus domestica HOM05D003984 ORTHO05D004740 5.3e-118 427.9 264 81.1
MSTRG.27450 Avicennia marina HOM05D003984 ORTHO05D004740 6.9e-118 427.6 264 81.8
Ciclev10032445m.g Citrus clementina HOM05D003984 ORTHO05D004740 1.5e-117 426.4 261 83.1
Manes.07G104700 Manihot esculenta HOM05D003984 ORTHO05D004740 5.9e-117 424.5 260 82.3
CSS0011111 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 1.0e-116 423.7 263 81.0
CSS0025505 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 1.3e-116 423.3 264 79.2
Migut.F02015 Erythranthe guttata HOM05D003984 ORTHO05D004740 3.8e-116 421.8 259 81.5
Potri.008G046000 Populus trichocarpa HOM05D003984 ORTHO05D004740 5.0e-116 421.4 262 81.7
Cfa001574 Carpinus fangiana HOM05D003984 ORTHO05D004740 6.5e-116 421.0 264 80.3
TWI15G0393 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 6.5e-116 421.0 256 81.6
CSS0036351 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 1.1e-115 420.2 264 78.8
ClCG09G020350 Citrullus lanatus HOM05D003984 ORTHO05D004740 1.1e-115 420.2 264 80.7
CiPaw.02G177500 Carya illinoinensis HOM05D003984 ORTHO05D004740 2.5e-115 419.1 265 80.8
AUR62036011 Chenopodium quinoa HOM05D003984 ORTHO05D004740 2.5e-115 419.1 260 80.8
GSVIVG01032647001 Vitis vinifera HOM05D003984 ORTHO05D004740 5.5e-115 417.9 264 79.5
CANSAT56G1305 Cannabis sativa HOM05D003984 ORTHO05D004740 9.4e-115 417.2 264 78.8
Potri.010G215500 Populus trichocarpa HOM05D003984 ORTHO05D004740 9.4e-115 417.2 264 81.4
Duzib114G0791 Durio zibethinus HOM05D003984 ORTHO05D004740 2.1e-114 416.0 262 80.9
CsaV3_5G026080 Cucumis sativus L. HOM05D003984 ORTHO05D004740 2.7e-114 415.6 264 79.9
Medtr1g116240 Medicago truncatula HOM05D003984 ORTHO05D004740 2.7e-114 415.6 264 79.9
SGA_v2.0_scaffold329G48849 Striga asiatica HOM05D003984 ORTHO05D004740 3.6e-114 415.2 260 82.7
FAN10G1795 Fragaria x ananassa HOM05D003984 ORTHO05D004740 4.7e-114 414.8 264 79.5
Duzib128G0096 Durio zibethinus HOM05D003984 ORTHO05D004740 1.0e-113 413.7 263 80.6
FAN06G2832 Fragaria x ananassa HOM05D003984 ORTHO05D004740 1.0e-113 413.7 264 79.2
Actinidia13840 Actinidia chinensis HOM05D003984 ORTHO05D004740 1.4e-113 413.3 262 79.8
FvH4_7g20520 Fragaria vesca HOM05D003984 ORTHO05D004740 1.4e-113 413.3 264 78.8
FAN03G0045 Fragaria x ananassa HOM05D003984 ORTHO05D004740 1.4e-113 413.3 264 78.8
PGR044G2197 Punica granatum HOM05D003984 ORTHO05D004740 8.8e-113 410.6 260 80.8
Lj8A94T49 Lonicera japonica HOM05D003984 ORTHO05D004740 1.1e-112 410.2 263 78.3
Lj5g0020432 Lotus japonicus HOM05D003984 ORTHO05D004740 1.1e-112 410.2 264 78.8
Sabra08G0032300 Salix brachista HOM05D003984 ORTHO05D004740 1.1e-112 410.2 270 78.5
arahy.Tifrunner.gnm1.ann1.V3HSKN Arachis hypogaea HOM05D003984 ORTHO05D004740 2.6e-112 409.1 255 80.8
EL10Ac2g03538 Beta vulgaris HOM05D003984 ORTHO05D004740 3.3e-112 408.7 261 79.3
Lalb_Chr21g0307521 Lupinus albus HOM05D003984 ORTHO05D004740 3.3e-112 408.7 271 77.9
Rhsim09G0154900 Rhododendron simsii HOM05D003984 ORTHO05D004740 4.4e-112 408.3 250 82.0
TPR.G10390 Trifolium pratense HOM05D003984 ORTHO05D004740 4.4e-112 408.3 265 78.9
Migut.F01787 Erythranthe guttata HOM05D003984 ORTHO05D004740 7.4e-112 407.5 261 80.1
Psat6g240040 Pisum sativum HOM05D003984 ORTHO05D004740 9.7e-112 407.1 264 78.8
TAR633G2252 Trochodendron aralioides HOM05D003984 ORTHO05D004740 9.7e-112 407.1 262 76.7
Nn2g10608 Nelumbo nucifera HOM05D003984 ORTHO05D004740 1.3e-111 406.8 266 75.9
Sed0003028 Sechium edule HOM05D003984 ORTHO05D004740 2.8e-111 405.6 264 77.7
TWI63G0288 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 3.7e-111 405.2 251 80.1
CSS0002243 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 4.8e-111 404.8 254 81.5
Lalb_Chr06g0164371 Lupinus albus HOM05D003984 ORTHO05D004740 8.2e-111 404.1 264 78.4
VMungo0720G0811 Vigna mungo HOM05D003984 ORTHO05D004740 2.4e-110 402.5 265 77.7
DCAR_019150 Daucus carota HOM05D003984 ORTHO05D004740 4.1e-110 401.7 261 77.4
AUR62041612 Chenopodium quinoa HOM05D003984 ORTHO05D004740 5.3e-110 401.4 287 72.5
Gohir.D10G216200 Gossypium hirsutum HOM05D003984 ORTHO05D004740 9.1e-110 400.6 262 76.7
Glyma.10G294300 Glycine max HOM05D003984 ORTHO05D004740 1.2e-109 400.2 264 76.9
DCAR_015251 Daucus carota HOM05D003984 ORTHO05D004740 1.6e-109 399.8 250 80.0
Gorai.011G241800 Gossypium raimondii HOM05D003984 ORTHO05D004740 1.6e-109 399.8 262 76.7
Glyma.20G244200 Glycine max HOM05D003984 ORTHO05D004740 3.5e-109 398.7 262 77.1
Gohir.A05G343700 Gossypium hirsutum HOM05D003984 ORTHO05D004740 3.5e-109 398.7 262 76.3
Gorai.012G092700 Gossypium raimondii HOM05D003984 ORTHO05D004740 3.5e-109 398.7 262 76.3
PSO384G2137 Papaver somniferum HOM05D003984 ORTHO05D004740 3.5e-109 398.7 257 77.4
Eucgr.J01137 Eucalyptus grandis HOM05D003984 ORTHO05D004740 7.7e-109 397.5 262 77.5
Ah.10g033080 Amaranthus hybridus HOM05D003984 ORTHO05D004740 1.0e-108 397.1 284 73.2
PSO339G0239 Papaver somniferum HOM05D003984 ORTHO05D004740 1.0e-108 397.1 257 77.0
Oeu057248.1 Olea europaea HOM05D003984 ORTHO05D004740 2.2e-108 396.0 254 79.5
Phvul.007G005800 Phaseolus vulgaris HOM05D003984 ORTHO05D004740 2.2e-108 396.0 265 77.0
Lalb_Chr02g0144171 Lupinus albus HOM05D003984 ORTHO05D004740 3.8e-108 395.2 267 76.8
Hund22456 Selenicereus undatus HOM05D003984 ORTHO05D004740 5.0e-108 394.8 264 77.3
Gohir.A10G208060 Gossypium hirsutum HOM05D003984 ORTHO05D004740 8.5e-108 394.0 262 76.0
Nn2g12956 Nelumbo nucifera HOM05D003984 ORTHO05D004740 1.5e-107 393.3 265 75.8
THA.LOC104825886 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 1.6e-106 389.8 263 75.3
TAR623G0696 Trochodendron aralioides HOM05D003984 ORTHO05D004740 2.1e-106 389.4 251 76.9
Lj1A928T58 Lonicera japonica HOM05D003984 ORTHO05D004740 2.3e-105 386.0 303 68.0
SalBow3G2899 Salvia bowleyana HOM05D003984 ORTHO05D004740 5.2e-105 384.8 256 77.7
arahy.Tifrunner.gnm1.ann1.B234YK Arachis hypogaea HOM05D003984 ORTHO05D004740 2.6e-104 382.5 308 66.6
ECA238G2056 Erigeron canadensis HOM05D003984 ORTHO05D004740 1.3e-103 380.2 259 74.9
Sed0000226 Sechium edule HOM05D003984 ORTHO05D004740 1.7e-103 379.8 264 74.2
Sabra10G0166500 Salix brachista HOM05D003984 ORTHO05D004740 3.7e-103 378.6 282 72.0
HanXRQChr12g0367731 Helianthus annuus HOM05D003984 ORTHO05D004740 1.4e-102 376.7 264 73.1
THA.LOC104824242 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 5.3e-102 374.8 261 73.6
HanXRQChr07g0200921 Helianthus annuus HOM05D003984 ORTHO05D004740 7.0e-102 374.4 251 75.3
ATR0594G132 Amborella trichopoda HOM05D003984 ORTHO05D004740 1.2e-101 373.6 265 71.7
Aqoxy4G03159 Aquilegia oxysepala HOM05D003984 ORTHO05D004740 1.6e-101 373.2 277 70.8
Sopen04g004710 Solanum pennellii HOM05D003984 ORTHO05D004740 2.0e-101 372.9 189 98.9
Haze_16954 Corylus avellana HOM05D003984 ORTHO05D004740 2.2e-100 369.4 235 77.9
THA.LOC104810167 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 3.8e-100 368.6 248 75.0
Lsat_1_v5_gn_2_115481 Lactuca sativa HOM05D003984 ORTHO05D004740 8.5e-100 367.5 248 75.4
CDE09G0608 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 5.5e-99 364.8 263 71.5
PSO339G2647 Papaver somniferum HOM05D003984 ORTHO05D004740 5.5e-99 364.8 266 71.4
HPP92_017944 Vanilla planifolia HOM05D003984 ORTHO05D004740 1.2e-96 357.1 265 69.8
Thhalv10010647m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 1.5e-96 356.7 259 70.3
HPP92_019786 Vanilla planifolia HOM05D003984 ORTHO05D004740 2.6e-96 355.9 264 67.8
Aa31sc33G70 Aethionema arabicum HOM05D003984 ORTHO05D004740 3.4e-96 355.5 261 70.1
Os11g0102600 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 3.4e-96 355.5 257 69.6
Os12g0102200 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 3.4e-96 355.5 257 69.6
HanXRQChr14g0460861 Helianthus annuus HOM05D003984 ORTHO05D004740 4.4e-96 355.1 250 74.0
AL5G36110 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 7.5e-96 354.4 261 69.7
CARHR165000 Cardamine hirsuta HOM05D003984 ORTHO05D004740 7.5e-96 354.4 256 71.5
Lsat_1_v5_gn_8_21240 Lactuca sativa HOM05D003984 ORTHO05D004740 2.8e-95 352.4 266 69.2
AT3G55000 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 8.3e-95 350.9 261 69.7
C06p22550 Brassica napus HOM05D003984 ORTHO05D004740 4.1e-94 348.6 262 69.5
Carub.0005s2162 Capsella rubella HOM05D003984 ORTHO05D004740 7.0e-94 347.8 261 68.6
AL5G36120 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 1.2e-93 347.1 259 68.7
BcaB02g07705 Brassica carinata HOM05D003984 ORTHO05D004740 2.7e-93 345.9 259 68.7
BcaC08g44716 Brassica carinata HOM05D003984 ORTHO05D004740 2.7e-93 345.9 262 68.7
A07p22390 Brassica napus HOM05D003984 ORTHO05D004740 2.7e-93 345.9 259 68.7
Ca_11380_v3 Cicer arietinum L. HOM05D003984 ORTHO05D004740 2.7e-93 345.9 272 69.9
Sp5g07430 Schrenkiella parvula HOM05D003984 ORTHO05D004740 3.5e-93 345.5 256 71.1
BolC6t37445H Brassica oleracea HOM05D003984 ORTHO05D004740 1.7e-92 343.2 259 68.0
Sp5g07420 Schrenkiella parvula HOM05D003984 ORTHO05D004740 1.7e-92 343.2 261 68.6
Lj1C926T5 Lonicera japonica HOM05D003984 ORTHO05D004740 3.8e-92 342.0 263 68.1
Gohir.D04G082100 Gossypium hirsutum HOM05D003984 ORTHO05D004740 8.6e-92 340.9 218 77.5
unitig_0.g190 Utricularia gibba HOM05D003984 ORTHO05D004740 3.3e-91 339.0 235 73.6
Carub.0005s2163 Capsella rubella HOM05D003984 ORTHO05D004740 4.2e-91 338.6 261 68.2
Zm00001eb094350 Zea mays HOM05D003984 ORTHO05D004740 9.5e-91 337.4 257 67.7
CDE02G0952 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 1.2e-90 337.0 252 69.8
Sc20g0002240 Simmondsia chinensis HOM05D003984 ORTHO05D004740 1.2e-90 337.0 261 68.2
AT3G55005 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 2.8e-90 335.9 257 68.1
BraA07t29915Z Brassica rapa HOM05D003984 ORTHO05D004740 8.0e-90 334.3 278 64.0
CARHR165010 Cardamine hirsuta HOM05D003984 ORTHO05D004740 1.3e-87 327.0 255 67.1
Zm00001eb163130 Zea mays HOM05D003984 ORTHO05D004740 1.7e-87 326.6 257 66.9
MSTRG.9196 Avicennia marina HOM05D003984 ORTHO05D004740 3.7e-87 325.5 199 84.4
BraA09t40255Z Brassica rapa HOM05D003984 ORTHO05D004740 5.9e-85 318.2 261 64.0
MELO3C025490.2 Cucumis melo HOM05D003984 ORTHO05D004740 1.5e-83 313.5 206 79.1
A09p48020 Brassica napus HOM05D003984 ORTHO05D004740 4.3e-83 312.0 260 63.1
C08p30240 Brassica napus HOM05D003984 ORTHO05D004740 1.4e-81 307.0 260 63.5
BcaNung04652 Brassica carinata HOM05D003984 ORTHO05D004740 7.5e-80 301.2 260 62.3
BcaB01g00136 Brassica carinata HOM05D003984 ORTHO05D004740 1.3e-79 300.4 260 62.3
Thhalv10010676m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 1.4e-78 297.0 240 67.9
BolC8t50631H Brassica oleracea HOM05D003984 ORTHO05D004740 3.2e-78 295.8 257 61.1
Sc20g0002230 Simmondsia chinensis HOM05D003984 ORTHO05D004740 1.3e-71 273.9 189 74.6
FAN01G2342 Fragaria x ananassa HOM05D003984 ORTHO05D004740 4.6e-69 265.4 144 89.6
FAN06G1180 Fragaria x ananassa HOM05D003984 ORTHO05D004740 1.9e-62 243.4 171 71.3
AagrBONN_evm.TU.Sc2ySwM_344.1695 Anthoceros agrestis HOM05D003984 ORTHO05D004740 5.6e-43 178.7 212 51.4
Pp3c14_5580 Physcomitrium patens HOM05D003984 ORTHO05D004740 1.5e-40 170.6 174 50.0
SEGI_35779 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 2.9e-39 166.4 243 45.3
Mapoly0066s0078 Marchantia polymorpha HOM05D003984 ORTHO05D004740 3.2e-38 162.9 174 51.1
Actinidia29191 Actinidia chinensis HOM05D003984 ORTHO05D004740 1.7e-31 140.6 120 62.5
Cpa.g.sc1.281 Carica papaya HOM05D003984 ORTHO05D004740 2.9e-31 139.8 105 65.7
TAR624G0784 Trochodendron aralioides HOM05D003984 ORTHO05D004740 6.0e-29 132.1 93 71.0
FAN06G2469 Fragaria x ananassa HOM05D003984 ORTHO05D004740 1.0e-28 131.3 74 90.5
CBR_g37750 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-28 131.0 251 37.5
SEGI_13922 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 4.0e-25 119.4 76 78.9
SMO356G0399 Selaginella moellendorffii HOM05D003984 ORTHO05D004740 2.8e-18 96.7 157 39.5
CBR_g10977 Chara braunii HOM05D003984 ORTHO05D004740 3.4e-16 89.7 117 41.9
AUR62035988 Chenopodium quinoa HOM05D003984 ORTHO05D004740 1.0e-15 88.2 86 54.7
CSS0046661 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 2.3e-12 77.0 40 87.5
SHI42769 Sapria himalayana HOM05D003984 ORTHO05D004740 2.0e-11 73.9 65 61.5
HanXRQChr17g0557371 Helianthus annuus HOM05D000549 ORTHO05D004740 5.7e-11 72.4 40 75.0
Nn6g33815 Nelumbo nucifera HOM05D003984 ORTHO05D004740 6.3e-10 68.9 40 75.0
RcHm_v2.0_Chr2g0140211 Rosa chinensis HOM05D003984 ORTHO05D004740 1.4e-09 67.8 43 67.4
PRCOL_00000040 Prasinoderma coloniale HOM05D003984 ORTHO05D004740 2.0e-08 63.9 138 32.6
MCO05G642 Micromonas commoda HOM05D003984 ORTHO05D004740 1.9e-06 57.4 208 26.0
Sabra18G0026300 Salix brachista HOM05D002732 ORTHO05D002955 9.4e-06 55.1 32 87.5


User provided reference genes

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