Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400026405 Solanum tuberosum HOM05D006028 ORTHO05D007784 1.1e-209 733.0 377 100.0
Sopen02g030790 Solanum pennellii HOM05D006028 ORTHO05D007784 8.4e-205 716.8 377 97.1
CAN.G625.27 Capsicum annuum HOM05D006028 ORTHO05D007784 4.2e-196 688.0 377 93.1
Nitab4.5_0000912g0170 Nicotiana tabacum HOM05D006028 ORTHO05D007784 1.4e-194 682.9 377 92.3
Nitab4.5_0004416g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 6.7e-194 680.6 377 92.0
Peaxi162Scf00394g00620 Petunia axillaris HOM05D006028 ORTHO05D007784 7.0e-159 564.3 377 79.6
CSS0038458 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 2.5e-140 502.7 377 67.6
Lj2A441T56 Lonicera japonica HOM05D006028 ORTHO05D007784 3.6e-139 498.8 378 68.5
CSS0040274 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 1.4e-138 496.9 377 67.1
Hma1.2p1_1109F.1_g258060 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 5.2e-138 495.0 378 66.1
Oeu008432.1 Olea europaea HOM05D006028 ORTHO05D007784 3.4e-137 492.3 377 66.3
Rhsim10G0067700 Rhododendron simsii HOM05D006028 ORTHO05D007784 2.9e-136 489.2 377 65.0
Cfa007919 Carpinus fangiana HOM05D006028 ORTHO05D007784 2.1e-134 483.0 377 65.5
Cc07_g08770 Coffea canephora HOM05D006028 ORTHO05D007784 2.1e-134 483.0 376 65.4
QL02p051229 Quercus lobata HOM05D006028 ORTHO05D007784 5.6e-132 474.9 376 64.6
Haze_14158 Corylus avellana HOM05D006028 ORTHO05D007784 1.1e-130 470.7 385 63.4
Actinidia15886 Actinidia chinensis HOM05D006028 ORTHO05D007784 5.2e-130 468.4 377 62.3
Thecc.04G133100 Theobroma cacao HOM05D006028 ORTHO05D007784 1.5e-129 466.8 379 64.6
TAR629G2682 Trochodendron aralioides HOM05D006028 ORTHO05D007784 2.6e-129 466.1 377 63.4
Manes.02G069100 Manihot esculenta HOM05D006028 ORTHO05D007784 9.9e-129 464.2 377 62.6
Ciclev10011993m.g Citrus clementina HOM05D006028 ORTHO05D007784 4.9e-128 461.8 377 64.5
Prupe.3G142900 Prunus persica HOM05D006028 ORTHO05D007784 8.4e-128 461.1 380 62.4
GSVIVG01031016001 Vitis vinifera HOM05D006028 ORTHO05D007784 7.1e-127 458.0 377 61.3
MSTRG.17981 Avicennia marina HOM05D006028 ORTHO05D007784 6.0e-126 454.9 382 63.1
CANSAT78G1220 Cannabis sativa HOM05D006028 ORTHO05D007784 1.7e-125 453.4 377 62.3
Atru.chr1.1685 Acer truncatum HOM05D006028 ORTHO05D007784 2.3e-125 453.0 377 62.3
CiPaw.03G061900 Carya illinoinensis HOM05D006028 ORTHO05D007784 3.0e-125 452.6 377 61.0
ECA246G2307 Erigeron canadensis HOM05D006028 ORTHO05D007784 6.6e-125 451.4 377 61.8
Potri.004G099000 Populus trichocarpa HOM05D006028 ORTHO05D007784 1.5e-124 450.3 381 61.7
Dinv34819 Davidia involucrata HOM05D006028 ORTHO05D007784 7.3e-124 448.0 377 64.2
TWI53G1478 Tripterygium wilfordii HOM05D006028 ORTHO05D007784 7.3e-124 448.0 378 61.4
Gohir.A12G053400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.2e-121 440.7 379 60.9
HanXRQChr12g0375811 Helianthus annuus HOM05D006028 ORTHO05D007784 1.7e-120 436.8 377 59.4
SalBow3G3202 Salvia bowleyana HOM05D006028 ORTHO05D007784 2.2e-120 436.4 397 60.7
Gohir.D12G052100 Gossypium hirsutum HOM05D006028 ORTHO05D007784 2.9e-120 436.0 379 60.7
Gorai.008G055200 Gossypium raimondii HOM05D006028 ORTHO05D007784 4.9e-120 435.3 379 60.4
Migut.H00221 Erythranthe guttata HOM05D006028 ORTHO05D007784 6.4e-120 434.9 377 60.7
SGA_v2.0_scaffold33G13509 Striga asiatica HOM05D006028 ORTHO05D007784 2.4e-119 433.0 379 59.6
COL.COLO4_09340 Corchorus olitorius HOM05D006028 ORTHO05D007784 5.4e-119 431.8 379 60.4
CsaV3_3G020280 Cucumis sativus L. HOM05D006028 ORTHO05D007784 5.4e-119 431.8 382 58.9
Duzib138G1322 Durio zibethinus HOM05D006028 ORTHO05D007784 1.6e-118 430.3 379 61.2
Glyma.14G193600 Glycine max HOM05D006028 ORTHO05D007784 4.6e-118 428.7 377 59.7
Glyma.02G226700 Glycine max HOM05D006028 ORTHO05D007784 3.0e-117 426.0 378 60.3
PGR004G1556 Punica granatum HOM05D006028 ORTHO05D007784 5.1e-117 425.2 377 59.2
MELO3C023751.2 Cucumis melo HOM05D006028 ORTHO05D007784 2.8e-115 419.5 378 58.2
Aqoxy4G02499 Aquilegia oxysepala HOM05D006028 ORTHO05D007784 8.1e-115 417.9 380 58.7
Lalb_Chr10g0103311 Lupinus albus HOM05D006028 ORTHO05D007784 2.4e-114 416.4 378 59.0
LjContig00155g0021894 Lotus japonicus HOM05D006028 ORTHO05D007784 3.1e-114 416.0 381 59.3
Hund13711 Selenicereus undatus HOM05D006028 ORTHO05D007784 9.0e-114 414.5 377 57.0
Lsat_1_v5_gn_3_79681 Lactuca sativa HOM05D006028 ORTHO05D007784 1.5e-113 413.7 377 57.8
TPR.G23017 Trifolium pratense HOM05D006028 ORTHO05D007784 2.0e-113 413.3 377 59.4
Phvul.008G261300 Phaseolus vulgaris HOM05D006028 ORTHO05D007784 4.4e-113 412.1 377 58.9
vmacro05550 Vaccinium macrocarpon HOM05D006028 ORTHO05D007784 5.8e-113 411.8 378 58.2
Eucgr.F02499 Eucalyptus grandis HOM05D006028 ORTHO05D007784 7.6e-113 411.4 333 60.7
VMungo0647G1142 Vigna mungo HOM05D006028 ORTHO05D007784 9.9e-113 411.0 377 58.9
RcHm_v2.0_Chr6g0273571 Rosa chinensis HOM05D006028 ORTHO05D007784 1.3e-112 410.6 375 57.6
Medtr5g070860 Medicago truncatula HOM05D006028 ORTHO05D007784 6.4e-112 408.3 378 59.3
FvH4_4g11350 Fragaria vesca HOM05D006028 ORTHO05D007784 1.2e-110 404.1 376 56.9
Nn3g17886 Nelumbo nucifera HOM05D006028 ORTHO05D007784 7.9e-110 401.4 379 57.3
PSO017G5051 Papaver somniferum HOM05D006028 ORTHO05D007784 1.0e-109 401.0 382 55.5
FAN07G0954 Fragaria x ananassa HOM05D006028 ORTHO05D007784 2.3e-109 399.8 376 56.4
AUR62023297 Chenopodium quinoa HOM05D006028 ORTHO05D007784 7.4e-108 394.8 381 55.9
ClCG05G012120 Citrullus lanatus HOM05D006028 ORTHO05D007784 2.8e-107 392.9 377 57.3
EL10Ac2g04560 Beta vulgaris HOM05D006028 ORTHO05D007784 6.9e-106 388.3 377 55.2
HPP92_018993 Vanilla planifolia HOM05D006028 ORTHO05D007784 1.5e-105 387.1 382 55.8
PSO478G1932 Papaver somniferum HOM05D006028 ORTHO05D007784 2.0e-105 386.7 382 54.7
AT2G18410 Arabidopsis thaliana HOM05D006028 ORTHO05D007784 9.9e-105 384.4 381 56.2
THA.LOC104820944 Tarenaya hassleriana HOM05D006028 ORTHO05D007784 8.4e-104 381.3 381 55.4
Carub.0003s3256 Capsella rubella HOM05D006028 ORTHO05D007784 3.2e-103 379.4 381 56.7
AL3G51690 Arabidopsis lyrata HOM05D006028 ORTHO05D007784 4.2e-103 379.0 381 54.9
AUR62009005 Chenopodium quinoa HOM05D006028 ORTHO05D007784 2.7e-102 376.3 399 52.9
ATR1125G043 Amborella trichopoda HOM05D006028 ORTHO05D007784 1.0e-101 374.4 391 51.7
Sp3g31820 Schrenkiella parvula HOM05D006028 ORTHO05D007784 1.3e-101 374.0 381 54.3
SpUn0030_0010 Schrenkiella parvula HOM05D006028 ORTHO05D007784 1.3e-101 374.0 381 54.3
Sabra04G0080900 Salix brachista HOM05D006028 ORTHO05D007784 1.5e-100 370.5 382 52.9
Thhalv10022737m.g Eutrema salsugineum HOM05D006028 ORTHO05D007784 3.3e-100 369.4 381 53.5
BcaC06g36407 Brassica carinata HOM05D006028 ORTHO05D007784 5.6e-100 368.6 381 53.3
arahy.Tifrunner.gnm1.ann1.QNRR2Z Arachis hypogaea HOM05D006028 ORTHO05D007784 1.6e-99 367.1 381 55.1
A07p02330 Brassica napus HOM05D006028 ORTHO05D007784 6.2e-99 365.2 385 54.0
Ah.16g101740 Amaranthus hybridus HOM05D006028 ORTHO05D007784 8.1e-99 364.8 377 52.0
CARHR109010 Cardamine hirsuta HOM05D006028 ORTHO05D007784 1.4e-98 364.0 382 52.9
BraA07t28024Z Brassica rapa HOM05D006028 ORTHO05D007784 3.1e-98 362.8 385 53.5
C07p04450 Brassica napus HOM05D006028 ORTHO05D007784 6.9e-98 361.7 385 52.7
BolC7t40839H Brassica oleracea HOM05D006028 ORTHO05D007784 9.0e-98 361.3 385 53.5
Aa31LG8G15620 Aethionema arabicum HOM05D006028 ORTHO05D007784 3.4e-97 359.4 380 52.4
MD00G1149900 Malus domestica HOM05D006028 ORTHO05D007784 1.0e-96 357.8 324 58.0
arahy.Tifrunner.gnm1.ann1.I9N3Y5 Arachis hypogaea HOM05D006028 ORTHO05D007784 1.3e-96 357.5 381 54.3
BcaB03g16641 Brassica carinata HOM05D006028 ORTHO05D007784 5.5e-95 352.1 405 50.9
Os03g0201700 Oryza sativa ssp. japonica HOM05D006028 ORTHO05D007784 4.5e-89 332.4 387 45.7
Zm00001eb007750 Zea mays HOM05D006028 ORTHO05D007784 1.1e-87 327.8 388 47.4
Solyc02g086100.4 Solanum lycopersicum HOM05D006028 ORTHO05D007784 2.5e-84 316.6 168 97.6
CDE05G1052 Ceratophyllum demersum HOM05D006028 ORTHO05D007784 1.3e-83 314.3 381 48.8
Sed0006429 Sechium edule HOM05D006028 ORTHO05D007784 4.6e-78 295.8 283 56.9
Sc10g0001120 Simmondsia chinensis HOM05D006028 ORTHO05D007784 4.1e-74 282.7 257 55.6
Psat0s2922g0040 Pisum sativum HOM05D006028 ORTHO05D007784 3.4e-73 279.6 257 56.0
Ca_05599_v3 Cicer arietinum L. HOM05D006028 ORTHO05D007784 7.7e-73 278.5 317 52.1
Hma1.2p1_1109F.1_g258050 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 3.8e-72 276.2 199 66.3
Pp3c5_13580 Physcomitrium patens HOM05D006028 ORTHO05D007784 4.7e-70 269.2 394 43.1
Mapoly0156s0014 Marchantia polymorpha HOM05D006028 ORTHO05D007784 4.5e-65 252.7 391 39.4
Haze_14159 Corylus avellana HOM05D006028 ORTHO05D007784 1.0e-64 251.5 225 61.8
SMO351G0506 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 1.3e-56 224.6 381 40.9
unitig_748.g7283 Utricularia gibba HOM05D006028 ORTHO05D007784 9.4e-55 218.4 380 40.0
Hma1.2p1_1109F.1_g258070 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 4.7e-54 216.1 169 67.5
QL02p051191 Quercus lobata HOM05D006028 ORTHO05D007784 5.7e-52 209.1 170 62.9
SEGI_33346 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 1.7e-48 197.6 233 46.4
SMO009G0016 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 7.2e-47 192.2 378 37.8
RcHm_v2.0_Chr1g0332721 Rosa chinensis HOM05D006028 ORTHO05D007784 4.7e-46 189.5 178 54.5
Potri.017G115566 Populus trichocarpa HOM05D006028 ORTHO05D007784 2.3e-45 187.2 166 55.4
SHI29124 Sapria himalayana HOM05D006028 ORTHO05D007784 1.9e-39 167.5 279 35.5
Gorai.007G000700 Gossypium raimondii HOM05D006028 ORTHO05D007784 1.0e-32 145.2 161 52.2
Nitab4.5_0014016g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 1.4e-29 134.8 82 82.9
Cpa.g.sc282.2 Carica papaya HOM05D006028 ORTHO05D007784 1.8e-29 134.4 159 45.3
FAN17G0046 Fragaria x ananassa HOM05D006028 ORTHO05D007784 2.3e-29 134.0 160 49.4
Gohir.A09G249300 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.2e-28 131.7 189 41.8
Gohir.1Z049310 Gossypium hirsutum HOM05D006028 ORTHO05D007784 4.4e-28 129.8 189 41.8
Sabra17G0095800 Salix brachista HOM05D006028 ORTHO05D007784 5.8e-28 129.4 168 47.0
AagrBONN_evm.TU.Sc2ySwM_368.1688 Anthoceros agrestis HOM05D006028 ORTHO05D007784 2.5e-23 114.0 142 50.7
AagrBONN_evm.TU.Sc2ySwM_368.1687 Anthoceros agrestis HOM05D006028 ORTHO05D007784 7.3e-23 112.5 165 35.8
Gohir.A06G000200 Gossypium hirsutum HOM05D006028 ORTHO05D007784 4.3e-15 86.7 104 44.2
Gohir.A12G000400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 4.7e-14 83.2 92 47.8
QL02p051195 Quercus lobata HOM05D006028 ORTHO05D007784 6.2e-14 82.8 70 57.1
SEGI_36511 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 8.9e-13 79.0 81 48.1
CBR_g37698 Chara braunii HOM05D006028 ORTHO05D007784 3.9e-08 63.5 438 22.6


User provided reference genes

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