Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 5.5e-77 290.8 138 100.0
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 1.5e-74 282.7 138 96.4
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 4.8e-73 277.7 138 94.9
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 1.1e-64 250.0 138 84.8
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 1.3e-62 243.0 138 83.3
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 1.8e-51 206.1 138 74.6
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 2.2e-49 199.1 141 66.7
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 3.7e-49 198.4 107 87.9
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 6.3e-49 197.6 141 66.0
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 8.2e-49 197.2 141 66.7
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 4.1e-48 194.9 140 67.1
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 9.1e-48 193.7 141 66.7
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 5.9e-47 191.0 138 64.5
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 7.7e-47 190.7 140 63.6
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 1.0e-46 190.3 141 65.2
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 1.0e-46 190.3 141 65.2
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 1.0e-46 190.3 141 65.2
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 1.3e-46 189.9 141 64.5
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 1.7e-46 189.5 141 65.2
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 2.9e-46 188.7 143 65.7
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 6.5e-46 187.6 141 64.5
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 1.1e-45 186.8 140 61.4
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 1.9e-45 186.0 141 62.4
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 2.5e-45 185.7 143 65.7
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 1.2e-44 183.3 139 61.2
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 1.6e-44 183.0 141 63.8
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 2.1e-44 182.6 141 61.7
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 2.1e-44 182.6 141 61.0
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 2.7e-44 182.2 141 61.0
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 1.0e-43 180.3 143 58.0
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 1.4e-43 179.9 139 61.2
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 1.5e-42 176.4 144 60.4
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 2.6e-42 175.6 141 58.9
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 3.4e-42 175.3 139 61.9
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 3.4e-42 175.3 140 58.6
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 5.7e-42 174.5 141 58.2
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 7.5e-42 174.1 143 55.9
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 7.5e-42 174.1 138 58.7
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 1.3e-41 173.3 143 63.6
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 1.3e-41 173.3 143 63.6
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 1.3e-41 173.3 141 60.3
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 1.7e-41 172.9 157 54.8
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 1.7e-41 172.9 140 56.4
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 3.7e-41 171.8 139 58.3
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 4.8e-41 171.4 142 57.7
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 6.3e-41 171.0 141 60.3
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 8.3e-41 170.6 141 60.3
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 1.1e-40 170.2 141 59.6
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 1.1e-40 170.2 142 57.7
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 1.4e-40 169.9 115 68.7
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 1.8e-40 169.5 141 57.4
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 3.1e-40 168.7 144 57.6
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 4.1e-40 168.3 145 58.6
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 2.0e-39 166.0 140 57.1
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 2.0e-39 166.0 140 61.4
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 3.5e-39 165.2 141 56.7
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 5.9e-39 164.5 139 54.7
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 1.7e-38 162.9 157 52.2
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 2.9e-38 162.2 141 56.0
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 3.8e-38 161.8 130 60.0
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 5.0e-38 161.4 139 54.7
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 6.5e-38 161.0 140 57.1
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 1.5e-37 159.8 145 51.7
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 7.2e-37 157.5 121 66.1
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 7.2e-37 157.5 141 54.6
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 9.4e-37 157.1 142 54.9
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 9.4e-37 157.1 142 54.2
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 2.1e-36 156.0 142 54.9
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 4.7e-36 154.8 142 53.5
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 1.4e-35 153.3 139 52.5
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 1.8e-35 152.9 141 53.2
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 4.0e-35 151.8 141 52.5
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 4.0e-35 151.8 141 52.5
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 4.0e-35 151.8 141 52.5
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 6.8e-35 151.0 141 53.2
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 8.8e-35 150.6 141 54.6
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 8.8e-35 150.6 139 49.6
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 4.4e-34 148.3 141 53.2
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 1.7e-33 146.4 142 50.0
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 3.7e-33 145.2 140 51.4
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 9.1e-32 140.6 166 44.0
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 8.6e-30 134.0 143 49.0
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 1.0e-27 127.1 140 50.7
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 1.2e-23 113.6 143 40.6
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 1.2e-23 113.6 143 42.0
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 2.0e-23 112.8 140 43.6
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 4.6e-23 111.7 144 43.8
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 1.3e-22 110.2 139 46.8
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 1.9e-21 106.3 90 60.0
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 2.5e-21 105.9 139 46.0
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 3.6e-20 102.1 209 35.4
DCAR_017283 Daucus carota HOM05D007415 ORTHO05D009324 3.7e-17 92.0 133 41.4
AagrBONN_evm.TU.Sc2ySwM_362.2902 Anthoceros agrestis HOM05D007415 ORTHO05D009324 1.2e-15 87.0 146 36.3
Mapoly0134s0003 Marchantia polymorpha HOM05D007415 ORTHO05D009324 3.5e-15 85.5 143 37.1
Pp3c1_28310 Physcomitrium patens HOM05D007415 ORTHO05D009324 5.0e-14 81.6 143 32.9
SalBow2G2324 Salvia bowleyana HOM05D007415 ORTHO05D009324 1.5e-13 80.1 197 31.0
TPR.G38565 Trifolium pratense HOM05D007415 ORTHO05D009324 4.3e-13 78.6 55 60.0
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 2.9e-09 65.9 49 69.4
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 9.2e-08 60.8 83 39.8
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 4.6e-07 58.5 47 66.0


User provided reference genes

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