Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400009860 Solanum tuberosum HOM05D007355 ORTHO05D009343 8.5e-70 266.9 138 100.0
Solyc04g081380.1 Solanum lycopersicum HOM05D007355 ORTHO05D009343 5.1e-67 257.7 138 95.7
Peaxi162Scf00400g00042 Petunia axillaris HOM05D007355 ORTHO05D009343 1.3e-33 146.7 143 65.0
CAN.G311.23 Capsicum annuum HOM05D007355 ORTHO05D009343 2.8e-33 145.6 78 92.3
CiPaw.08G065900 Carya illinoinensis HOM05D007355 ORTHO05D009343 5.9e-31 137.9 142 59.9
COL.COLO4_26156 Corchorus olitorius HOM05D007355 ORTHO05D009343 5.9e-31 137.9 130 59.2
Dinv39511 Davidia involucrata HOM05D007355 ORTHO05D009343 1.6e-28 129.8 121 62.8
QL02p011487 Quercus lobata HOM05D007355 ORTHO05D009343 1.6e-28 129.8 140 55.7
TAR625G0791 Trochodendron aralioides HOM05D007355 ORTHO05D009343 2.1e-28 129.4 130 60.8
Manes.05G148200 Manihot esculenta HOM05D007355 ORTHO05D009343 4.0e-27 125.2 137 54.0
Manes.18G014200 Manihot esculenta HOM05D007355 ORTHO05D009343 2.6e-26 122.5 138 52.9
Potri.005G238400 Populus trichocarpa HOM05D007355 ORTHO05D009343 2.6e-26 122.5 132 56.8
Sabra05G0184200 Salix brachista HOM05D007355 ORTHO05D009343 3.4e-26 122.1 131 55.7
Thecc.08G043500 Theobroma cacao HOM05D007355 ORTHO05D009343 5.7e-26 121.3 134 53.7
Hma1.2p1_0638F.1_g193820 Hydrangea macrophylla HOM05D007355 ORTHO05D009343 7.5e-26 120.9 133 57.1
Gohir.A06G004700 Gossypium hirsutum HOM05D007355 ORTHO05D009343 3.7e-25 118.6 127 54.3
Haze_22626 Corylus avellana HOM05D007355 ORTHO05D009343 8.3e-25 117.5 98 64.3
Gohir.D06G000500 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.4e-24 116.7 127 53.5
Gorai.010G004900 Gossypium raimondii HOM05D007355 ORTHO05D009343 1.4e-24 116.7 127 53.5
arahy.Tifrunner.gnm1.ann1.PADY8Y Arachis hypogaea HOM05D007355 ORTHO05D009343 1.2e-23 113.6 99 65.7
Actinidia37930 Actinidia chinensis HOM05D007355 ORTHO05D009343 1.6e-23 113.2 117 58.1
CSS0013130 Camellia sinensis var. sinensis HOM05D007355 ORTHO05D009343 2.7e-23 112.5 99 64.6
Cfa013942 Carpinus fangiana HOM05D007355 ORTHO05D009343 5.9e-23 111.3 99 65.7
FAN20G0162 Fragaria x ananassa HOM05D007355 ORTHO05D009343 5.9e-23 111.3 124 54.0
Glyma.06G024800 Glycine max HOM05D007355 ORTHO05D009343 5.9e-23 111.3 136 52.2
PGR083G2600 Punica granatum HOM05D007355 ORTHO05D009343 7.8e-23 110.9 134 53.0
arahy.Tifrunner.gnm1.ann1.Y2NNQI Arachis hypogaea HOM05D007355 ORTHO05D009343 1.0e-22 110.5 143 50.3
Phvul.009G016500 Phaseolus vulgaris HOM05D007355 ORTHO05D009343 1.0e-22 110.5 138 50.0
Lj5g0016063 Lotus japonicus HOM05D007355 ORTHO05D009343 1.3e-22 110.2 143 48.3
Duzib093G0416 Durio zibethinus HOM05D007355 ORTHO05D009343 5.0e-22 108.2 98 60.2
TPR.G26402 Trifolium pratense HOM05D007355 ORTHO05D009343 5.0e-22 108.2 132 50.8
Glyma.04G024700 Glycine max HOM05D007355 ORTHO05D009343 6.6e-22 107.8 107 56.1
Lalb_Chr14g0369841 Lupinus albus HOM05D007355 ORTHO05D009343 6.6e-22 107.8 137 49.6
FAN15G2202 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.1e-21 107.1 115 55.7
FAN27G0012 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.1e-21 107.1 115 55.7
Aqoxy5G01778 Aquilegia oxysepala HOM05D007355 ORTHO05D009343 1.9e-21 106.3 136 52.9
DCAR_017465 Daucus carota HOM05D007355 ORTHO05D009343 2.5e-21 105.9 121 55.4
Ciclev10003277m.g Citrus clementina HOM05D007355 ORTHO05D009343 4.3e-21 105.1 94 59.6
VMungo1309G0669 Vigna mungo HOM05D007355 ORTHO05D009343 4.3e-21 105.1 138 52.2
MBI05_g15356_MAGBIO Magnolia biondii HOM05D007355 ORTHO05D009343 9.5e-21 104.0 116 55.2
SalBow7G4291 Salvia bowleyana HOM05D007355 ORTHO05D009343 9.5e-21 104.0 96 60.4
Sc15g0005040 Simmondsia chinensis HOM05D007355 ORTHO05D009343 9.5e-21 104.0 101 58.4
ClCG05G018320 Citrullus lanatus HOM05D007355 ORTHO05D009343 1.2e-20 103.6 118 51.7
Gorai.009G270200 Gossypium raimondii HOM05D007355 ORTHO05D009343 1.2e-20 103.6 99 62.6
Gorai.009G194900 Gossypium raimondii HOM05D007355 ORTHO05D009343 1.6e-20 103.2 136 50.7
Gohir.A05G257150 Gossypium hirsutum HOM05D007355 ORTHO05D009343 2.1e-20 102.8 99 62.6
Nn1g05885 Nelumbo nucifera HOM05D007355 ORTHO05D009343 2.8e-20 102.4 132 53.0
Ca_13424_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 6.1e-20 101.3 96 57.3
Ca_13425_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 6.1e-20 101.3 96 57.3
Nn5g30158 Nelumbo nucifera HOM05D007355 ORTHO05D009343 1.0e-19 100.5 132 53.0
Gohir.D05G189650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.4e-19 100.1 136 50.0
CsaV3_3G045820 Cucumis sativus L. HOM05D007355 ORTHO05D009343 2.3e-19 99.4 99 58.6
MD15G1013100 Malus domestica HOM05D007355 ORTHO05D009343 2.3e-19 99.4 85 61.2
Gohir.D05G258650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 6.8e-19 97.8 99 57.6
Gohir.A05G186732 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.2e-18 97.1 136 49.3
Cpa.g.sc26.34 Carica papaya HOM05D007355 ORTHO05D009343 2.0e-18 96.3 136 47.1
DCAR_013865 Daucus carota HOM05D007355 ORTHO05D009343 2.0e-18 96.3 131 51.1
Sed0019478 Sechium edule HOM05D007355 ORTHO05D009343 5.8e-18 94.7 108 53.7
CiPaw.07G150900 Carya illinoinensis HOM05D007355 ORTHO05D009343 9.8e-18 94.0 119 49.6
Migut.C00824 Erythranthe guttata HOM05D007355 ORTHO05D009343 9.8e-18 94.0 112 54.5
MELO3C011006.2 Cucumis melo HOM05D007355 ORTHO05D009343 1.7e-17 93.2 133 43.6
Lj1g0016145 Lotus japonicus HOM05D007355 ORTHO05D009343 2.9e-17 92.4 125 50.4
Lalb_Chr22g0354351 Lupinus albus HOM05D007355 ORTHO05D009343 3.7e-17 92.0 96 56.2
Eucgr.F01645 Eucalyptus grandis HOM05D007355 ORTHO05D009343 4.9e-17 91.7 80 62.5
Lsat_1_v5_gn_2_9841 Lactuca sativa HOM05D007355 ORTHO05D009343 3.2e-16 89.0 134 44.0
Rhsim07G0246800 Rhododendron simsii HOM05D007355 ORTHO05D009343 4.1e-16 88.6 90 60.0
Sed0024841 Sechium edule HOM05D007355 ORTHO05D009343 5.4e-16 88.2 130 45.4
CsaV3_2G029470 Cucumis sativus L. HOM05D007355 ORTHO05D009343 7.0e-16 87.8 133 42.9
Medtr1g025150 Medicago truncatula HOM05D007355 ORTHO05D009343 1.6e-15 86.7 93 54.8
Ah.11g039070 Amaranthus hybridus HOM05D007355 ORTHO05D009343 2.7e-15 85.9 88 56.8
ClCG08G014360 Citrullus lanatus HOM05D007355 ORTHO05D009343 2.7e-15 85.9 124 43.5
Prupe.1G366200 Prunus persica HOM05D007355 ORTHO05D009343 3.5e-15 85.5 86 59.3
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 6.0e-15 84.7 86 59.3
Atru.chr13.303 Acer truncatum HOM05D007355 ORTHO05D009343 2.3e-14 82.8 85 56.5
BcaC07g39013 Brassica carinata HOM05D007355 ORTHO05D009343 8.6e-14 80.9 127 41.7
C08p19840 Brassica napus HOM05D007355 ORTHO05D009343 8.6e-14 80.9 127 41.7
BolC8t49623H Brassica oleracea HOM05D007355 ORTHO05D009343 8.6e-14 80.9 127 41.7
THA.LOC104814032 Tarenaya hassleriana HOM05D007355 ORTHO05D009343 1.9e-13 79.7 94 50.0
A08p29560 Brassica napus HOM05D007355 ORTHO05D009343 2.1e-12 76.3 127 39.4
BraA08t34894Z Brassica rapa HOM05D007355 ORTHO05D009343 2.1e-12 76.3 127 39.4
AL1G32690 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 6.2e-12 74.7 86 51.2
BcaB03g12886 Brassica carinata HOM05D007355 ORTHO05D009343 1.4e-11 73.6 128 39.8
Aa31LG4G5940 Aethionema arabicum HOM05D007355 ORTHO05D009343 1.8e-11 73.2 82 52.4
CARHR020450 Cardamine hirsuta HOM05D007355 ORTHO05D009343 1.8e-11 73.2 115 43.5
Thhalv10019842m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 2.3e-11 72.8 84 57.1
BcaC08g47049 Brassica carinata HOM05D007355 ORTHO05D009343 3.1e-11 72.4 84 56.0
C06p49660 Brassica napus HOM05D007355 ORTHO05D009343 3.1e-11 72.4 84 56.0
BolC6t40005H Brassica oleracea HOM05D007355 ORTHO05D009343 3.1e-11 72.4 84 56.0
Carub.0002s2256 Capsella rubella HOM05D007355 ORTHO05D009343 6.8e-11 71.2 84 52.4
Sp1g17750 Schrenkiella parvula HOM05D007355 ORTHO05D009343 6.8e-11 71.2 113 42.5
Thhalv10009918m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 1.5e-10 70.1 83 48.2
A07p41240 Brassica napus HOM05D007355 ORTHO05D009343 2.0e-10 69.7 84 54.8
BraA07t31659Z Brassica rapa HOM05D007355 ORTHO05D009343 2.0e-10 69.7 84 54.8
Carub.0001s1949 Capsella rubella HOM05D007355 ORTHO05D009343 5.8e-10 68.2 118 41.5
BcaB03g14421 Brassica carinata HOM05D007355 ORTHO05D009343 7.5e-10 67.8 114 37.7
BcaB03g14350 Brassica carinata HOM05D007355 ORTHO05D009343 1.7e-09 66.6 87 44.8
BcaB02g07039 Brassica carinata HOM05D007355 ORTHO05D009343 2.9e-09 65.9 86 47.7
BcaC08g45561 Brassica carinata HOM05D007355 ORTHO05D009343 2.9e-09 65.9 84 50.0
AT1G75717 Arabidopsis thaliana HOM05D007355 ORTHO05D009343 3.7e-09 65.5 84 52.4
AL2G35700 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 1.4e-08 63.5 84 50.0
C06p32480 Brassica napus HOM05D007355 ORTHO05D009343 4.1e-08 62.0 86 46.5
BolC6t38371H Brassica oleracea HOM05D007355 ORTHO05D009343 4.1e-08 62.0 86 46.5
ATR0627G001 Amborella trichopoda HOM05D007355 ORTHO05D009343 5.4e-08 61.6 134 37.3
CARHR069120 Cardamine hirsuta HOM05D007355 ORTHO05D009343 3.5e-07 58.9 84 48.8
DCAR_009926 Daucus carota HOM05D007355 ORTHO05D009343 2.3e-06 56.2 80 50.0


User provided reference genes

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