Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G4090 Punica granatum HOM05D006261 ORTHO05D007979 7.8e-214 746.9 388 100.0
Eucgr.I01173 Eucalyptus grandis HOM05D006261 ORTHO05D007979 3.1e-133 479.2 313 79.2
QL11p038259 Quercus lobata HOM05D006261 ORTHO05D007979 7.8e-129 464.5 322 76.4
Thecc.02G096300 Theobroma cacao HOM05D006261 ORTHO05D007979 1.3e-128 463.8 322 75.8
GSVIVG01031798001 Vitis vinifera HOM05D006261 ORTHO05D007979 3.9e-128 462.2 331 74.3
Haze_01887 Corylus avellana HOM05D006261 ORTHO05D007979 1.1e-127 460.7 317 76.7
Cfa005432 Carpinus fangiana HOM05D006261 ORTHO05D007979 1.9e-127 459.9 317 77.0
Gorai.002G007100 Gossypium raimondii HOM05D006261 ORTHO05D007979 5.6e-127 458.4 321 74.5
COL.COLO4_11716 Corchorus olitorius HOM05D006261 ORTHO05D007979 1.6e-126 456.8 316 76.3
Cpa.g.sc62.43 Carica papaya HOM05D006261 ORTHO05D007979 2.8e-126 456.1 316 76.3
Manes.15G143000 Manihot esculenta HOM05D006261 ORTHO05D007979 1.1e-125 454.1 316 75.6
TAR381G0774 Trochodendron aralioides HOM05D006261 ORTHO05D007979 6.8e-125 451.4 319 72.7
CANSAT25G2015 Cannabis sativa HOM05D006261 ORTHO05D007979 7.5e-124 448.0 316 73.7
TPR.G11138 Trifolium pratense HOM05D006261 ORTHO05D007979 1.3e-123 447.2 319 73.7
Lalb_Chr10g0095461 Lupinus albus HOM05D006261 ORTHO05D007979 2.9e-123 446.0 314 73.9
Lj2g0017302 Lotus japonicus HOM05D006261 ORTHO05D007979 3.7e-123 445.7 335 71.0
Ciclev10028211m.g Citrus clementina HOM05D006261 ORTHO05D007979 1.4e-122 443.7 316 73.4
Actinidia17850 Actinidia chinensis HOM05D006261 ORTHO05D007979 2.4e-122 443.0 337 69.1
Ca_12470_v3 Cicer arietinum L. HOM05D006261 ORTHO05D007979 2.4e-122 443.0 314 74.5
TWI31G0850 Tripterygium wilfordii HOM05D006261 ORTHO05D007979 3.2e-122 442.6 321 71.3
THA.LOC104807349 Tarenaya hassleriana HOM05D006261 ORTHO05D007979 5.4e-122 441.8 321 71.0
Medtr1g034000 Medicago truncatula HOM05D006261 ORTHO05D007979 1.2e-121 440.7 314 73.6
Psat6g096640 Pisum sativum HOM05D006261 ORTHO05D007979 1.2e-121 440.7 314 73.9
CsaV3_7G008780 Cucumis sativus L. HOM05D006261 ORTHO05D007979 3.5e-121 439.1 314 72.9
Gohir.A01G006000 Gossypium hirsutum HOM05D006261 ORTHO05D007979 4.6e-121 438.7 321 72.3
MD10G1089700 Malus domestica HOM05D006261 ORTHO05D007979 1.0e-120 437.6 319 72.4
CiPaw.05G054700 Carya illinoinensis HOM05D006261 ORTHO05D007979 1.7e-120 436.8 348 69.3
arahy.Tifrunner.gnm1.ann1.WU5QTE Arachis hypogaea HOM05D006261 ORTHO05D007979 6.6e-120 434.9 324 71.9
Nn5g30173 Nelumbo nucifera HOM05D006261 ORTHO05D007979 6.6e-120 434.9 335 68.4
Potri.004G144100 Populus trichocarpa HOM05D006261 ORTHO05D007979 8.6e-120 434.5 316 71.8
arahy.Tifrunner.gnm1.ann1.97F800 Arachis hypogaea HOM05D006261 ORTHO05D007979 1.1e-119 434.1 325 71.4
Potri.009G106100 Populus trichocarpa HOM05D006261 ORTHO05D007979 1.1e-119 434.1 316 70.9
Glyma.07G178400 Glycine max HOM05D006261 ORTHO05D007979 1.5e-119 433.7 314 72.9
MBI02_g21208_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 1.5e-119 433.7 316 70.9
Sed0027300 Sechium edule HOM05D006261 ORTHO05D007979 1.9e-119 433.3 314 72.0
Prupe.8G116700 Prunus persica HOM05D006261 ORTHO05D007979 2.5e-119 433.0 314 72.3
Hund06186 Selenicereus undatus HOM05D006261 ORTHO05D007979 3.3e-119 432.6 319 69.0
PSO541G6069 Papaver somniferum HOM05D006261 ORTHO05D007979 5.6e-119 431.8 316 70.6
FAN15G2665 Fragaria x ananassa HOM05D006261 ORTHO05D007979 4.7e-118 428.7 314 71.7
Peaxi162Scf00684g00565 Petunia axillaris HOM05D006261 ORTHO05D007979 4.7e-118 428.7 321 68.2
VMungo1215G1075 Vigna mungo HOM05D006261 ORTHO05D007979 1.1e-117 427.6 314 71.7
Atru.chr5.2784_Atru.chr5.2785 Acer truncatum HOM05D006261 ORTHO05D007979 2.3e-117 426.4 316 70.9
Atru.chr5.2799_Atru.chr5.2800 Acer truncatum HOM05D006261 ORTHO05D007979 2.3e-117 426.4 316 70.9
C01p04840 Brassica napus HOM05D006261 ORTHO05D007979 2.3e-117 426.4 321 68.2
BolC1t00468H Brassica oleracea HOM05D006261 ORTHO05D007979 3.1e-117 426.0 319 68.3
FAN20G2731 Fragaria x ananassa HOM05D006261 ORTHO05D007979 3.1e-117 426.0 314 71.3
vmacro19482 Vaccinium macrocarpon HOM05D006261 ORTHO05D007979 1.2e-116 424.1 345 66.1
Rhsim05G0080700 Rhododendron simsii HOM05D006261 ORTHO05D007979 1.5e-116 423.7 340 66.8
A01p04450 Brassica napus HOM05D006261 ORTHO05D007979 2.6e-116 422.9 321 67.9
Thhalv10025131m.g Eutrema salsugineum HOM05D006261 ORTHO05D007979 3.4e-116 422.5 321 67.9
Phvul.003G012500 Phaseolus vulgaris HOM05D006261 ORTHO05D007979 4.4e-116 422.2 315 70.8
Sp7g31680 Schrenkiella parvula HOM05D006261 ORTHO05D007979 4.4e-116 422.2 316 68.7
FAN27G0123 Fragaria x ananassa HOM05D006261 ORTHO05D007979 7.5e-116 421.4 314 70.4
BraA01t00432Z Brassica rapa HOM05D006261 ORTHO05D007979 9.9e-116 421.0 321 67.6
EL10Ac9g21824 Beta vulgaris HOM05D006261 ORTHO05D007979 2.2e-115 419.9 339 63.4
Sabra04G0095700 Salix brachista HOM05D006261 ORTHO05D007979 2.2e-115 419.9 325 67.7
Aqoxy6G01433 Aquilegia oxysepala HOM05D006261 ORTHO05D007979 6.4e-115 418.3 314 69.7
Cc02_g18510 Coffea canephora HOM05D006261 ORTHO05D007979 6.4e-115 418.3 338 65.1
Aa31LG2G16340 Aethionema arabicum HOM05D006261 ORTHO05D007979 1.4e-114 417.2 321 67.6
HanXRQChr16g0508741 Helianthus annuus HOM05D006261 ORTHO05D007979 2.4e-114 416.4 321 67.6
RcHm_v2.0_Chr6g0259011 Rosa chinensis HOM05D006261 ORTHO05D007979 3.2e-114 416.0 318 68.6
PGSC0003DMG400022938 Solanum tuberosum HOM05D006261 ORTHO05D007979 4.1e-114 415.6 339 64.0
Hma1.2p1_3161F.1_g333480 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 5.4e-114 415.2 354 64.1
ECA236G1018 Erigeron canadensis HOM05D006261 ORTHO05D001911 9.2e-114 414.5 339 65.8
SGA_v2.0_scaffold58G20611 Striga asiatica HOM05D006261 ORTHO05D007979 1.2e-113 414.1 321 68.5
Migut.B00311 Erythranthe guttata HOM05D006261 ORTHO05D007979 2.1e-113 413.3 321 67.6
Hma1.2p1_0584F.1_g183110 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 3.5e-113 412.5 353 64.0
AT4G33945 Arabidopsis thaliana HOM05D006261 ORTHO05D007979 4.6e-113 412.1 321 66.0
Sopen11g020360 Solanum pennellii HOM05D006261 ORTHO05D007979 6.0e-113 411.8 338 63.9
SalBow6G7179 Salvia bowleyana HOM05D006261 ORTHO05D007979 7.8e-113 411.4 321 66.7
AL7G17470 Arabidopsis lyrata HOM05D006261 ORTHO05D007979 1.7e-112 410.2 321 65.7
MELO3C018434.2 Cucumis melo HOM05D006261 ORTHO05D007979 1.7e-112 410.2 314 69.7
Solyc11g044870.2 Solanum lycopersicum HOM05D006261 ORTHO05D007979 3.0e-112 409.5 339 63.4
Lsat_1_v5_gn_7_87821 Lactuca sativa HOM05D006261 ORTHO05D007979 1.5e-111 407.1 340 62.4
Carub.0007s0647 Capsella rubella HOM05D006261 ORTHO05D007979 7.3e-111 404.8 321 65.4
AUR62011430 Chenopodium quinoa HOM05D006261 ORTHO05D007979 6.2e-110 401.7 339 62.5
Sc08g0000100 Simmondsia chinensis HOM05D006261 ORTHO05D007979 3.5e-105 386.0 275 73.1
Lj9C360T7 Lonicera japonica HOM05D006261 ORTHO05D007979 3.0e-104 382.9 340 64.1
AUR62016631 Chenopodium quinoa HOM05D006261 ORTHO05D007979 8.7e-104 381.3 328 61.6
unitig_21.g20756 Utricularia gibba HOM05D006261 ORTHO05D007979 1.1e-103 380.9 319 62.1
CSS0049642 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 1.9e-103 380.2 327 64.2
ATR0097G005 Amborella trichopoda HOM05D006261 ORTHO05D007979 4.3e-103 379.0 315 62.2
Zm00001eb255680 Zea mays HOM05D006261 ORTHO05D007979 5.6e-103 378.6 317 60.3
Nitab4.5_0002141g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 9.6e-103 377.9 322 61.5
CSS0020679 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 3.1e-101 372.9 322 63.7
Nitab4.5_0000736g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 3.1e-101 372.9 319 62.1
ClCG02G005750 Citrullus lanatus HOM05D006261 ORTHO05D007979 6.9e-101 371.7 314 64.0
Gohir.D01G006100 Gossypium hirsutum HOM05D006261 ORTHO05D007979 3.4e-100 369.4 321 62.3
Duzib052G0221 Durio zibethinus HOM05D006261 ORTHO05D007979 2.1e-97 360.1 316 62.7
Oeu007256.2 Olea europaea HOM05D006261 ORTHO05D007979 8.7e-96 354.8 285 66.3
Ah.01g020100 Amaranthus hybridus HOM05D006261 ORTHO05D007979 3.3e-95 352.8 314 59.6
SEGI_22642 Sequoiadendron giganteum HOM05D006261 ORTHO05D007979 1.1e-93 347.8 316 56.6
FAN24G3480 Fragaria x ananassa HOM05D006261 ORTHO05D007979 9.9e-92 341.3 282 67.4
HPP92_004238 Vanilla planifolia HOM05D006261 ORTHO05D007979 3.0e-88 329.7 316 55.1
Os02g0761200 Oryza sativa ssp. japonica HOM05D006261 ORTHO05D007979 5.6e-87 325.5 317 53.9
HPP92_004260 Vanilla planifolia HOM05D006261 ORTHO05D007979 7.4e-87 325.1 316 55.1
BcaB03g11867 Brassica carinata HOM05D006261 ORTHO05D007979 7.6e-84 315.1 267 65.5
MSTRG.16765 Avicennia marina HOM05D006261 ORTHO05D007979 3.8e-83 312.8 321 55.1
CARHR242070 Cardamine hirsuta HOM05D006261 ORTHO05D007979 1.1e-82 311.2 220 72.3
CDE10G1007 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 4.3e-79 299.3 316 53.2
FvH4_2g06790 Fragaria vesca HOM05D006261 ORTHO05D007979 1.1e-74 284.6 215 69.8
Mapoly0088s0010 Marchantia polymorpha HOM05D006261 ORTHO05D007979 1.7e-67 260.8 326 43.6
Dinv23589 Davidia involucrata HOM05D006261 ORTHO05D007979 4.8e-62 242.7 185 69.7
SHI05382 Sapria himalayana HOM05D006261 ORTHO05D007979 1.0e-59 235.0 218 59.2
RcHm_v2.0_Chr6g0252951 Rosa chinensis HOM05D006261 ORTHO05D007979 4.2e-58 229.6 334 45.2
CAN.G406.2 Capsicum annuum HOM05D006261 ORTHO05D007979 3.3e-55 219.9 206 56.8
DCAR_000243 Daucus carota HOM05D006261 ORTHO05D007979 2.6e-52 210.3 180 62.8
MBI02_g32602_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 1.1e-50 204.9 156 69.2
SMO116G0201 Selaginella moellendorffii HOM05D006261 ORTHO05D007979 1.0e-48 198.4 278 40.6
Glyma.20G009900 Glycine max HOM05D006261 ORTHO05D007979 8.2e-46 188.7 196 55.6
Pp3c15_12310 Physcomitrium patens HOM05D006261 ORTHO05D007979 2.6e-44 183.7 322 35.1
CDE10G0955 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 3.5e-44 183.3 180 52.8
Haze_01888 Corylus avellana HOM05D006261 ORTHO05D007979 9.4e-42 175.3 144 66.7
MCO13G090 Micromonas commoda HOM05D006261 ORTHO05D007979 3.8e-35 153.3 300 36.7
MBI15_g16863_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 5.7e-31 139.4 128 62.5
CAN.G406.3 Capsicum annuum HOM05D006261 ORTHO05D007979 2.1e-25 120.9 141 51.8
Dinv42128 Davidia involucrata HOM05D006261 ORTHO05D007979 2.1e-25 120.9 149 55.7
BcaB06g27277 Brassica carinata HOM05D006261 ORTHO05D007979 3.4e-23 113.6 82 72.0
DCAR_022063 Daucus carota HOM05D006261 ORTHO05D007979 1.7e-22 111.3 84 67.9
BcaB01g01387 Brassica carinata HOM05D006261 ORTHO05D007979 3.2e-21 107.1 81 65.4
BcaB01g01385 Brassica carinata HOM05D006261 ORTHO05D007979 1.2e-20 105.1 81 65.4
SHI05383 Sapria himalayana HOM05D006261 ORTHO05D007979 1.1e-18 98.6 100 52.0
Cre07.g343850 Chlamydomonas reinhardtii HOM05D006261 ORTHO05D007979 1.9e-18 97.8 321 26.5
CBR_g53672 Chara braunii HOM05D000019 ORTHO05D000353 1.5e-15 88.2 189 32.8
CAN.G93.11 Capsicum annuum HOM05D006261 ORTHO05D007979 5.8e-15 86.3 100 50.0
Lj1g0009361 Lotus japonicus HOM05D041574 ORTHO05D236155 1.1e-10 72.0 72 47.2
Lj5g0023620 Lotus japonicus HOM05D041574 ORTHO05D236101 7.3e-10 69.3 72 45.8


User provided reference genes

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