Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G3373 Punica granatum HOM05D003918 ORTHO05D004494 6.7e-40 166.8 77 100.0
CSS0003214 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
CSS0025262 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
CSS0028017 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
CSS0049251 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
CiPaw.13G144800 Carya illinoinensis HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
Ca_10762_v3 Cicer arietinum L. HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
Cc01_g10200 Coffea canephora HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
COL.COLO4_19215 Corchorus olitorius HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
DCAR_018757 Daucus carota HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
Glyma.11G192100 Glycine max HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
Glyma.12G082300 Glycine max HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
Gohir.A05G085800 Gossypium hirsutum HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
Gohir.D05G087700 Gossypium hirsutum HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
Gorai.009G089700 Gossypium raimondii HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
Hma1.2p1_0051F.1_g029570 Hydrangea macrophylla HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
Lj3g0024072 Lotus japonicus HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
Lalb_Chr01g0004631 Lupinus albus HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
Medtr4g057040 Medicago truncatula HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
Phvul.011G086900 Phaseolus vulgaris HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
Sc21g0004230 Simmondsia chinensis HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
Sc21g0004490 Simmondsia chinensis HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
Thecc.09G297000 Theobroma cacao HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
TWI79G0503 Tripterygium wilfordii HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
TWI79G0939 Tripterygium wilfordii HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
HPP92_026243 Vanilla planifolia HOM05D003918 ORTHO05D004494 4.8e-38 160.6 76 96.1
DCAR_015501 Daucus carota HOM05D003918 ORTHO05D004494 6.2e-38 160.2 76 96.1
TWI31G0950 Tripterygium wilfordii HOM05D003918 ORTHO05D004494 6.2e-38 160.2 76 96.1
TAR623G0966 Trochodendron aralioides HOM05D003918 ORTHO05D004494 6.2e-38 160.2 76 96.1
Zm00001eb402980 Zea mays HOM05D003918 ORTHO05D004494 8.1e-38 159.8 76 94.7
AL4G22250 Arabidopsis lyrata HOM05D003918 ORTHO05D004494 1.1e-37 159.5 76 96.1
CAN.G546.56 Capsicum annuum HOM05D003918 ORTHO05D004494 1.1e-37 159.5 76 94.7
Eucgr.J00392 Eucalyptus grandis HOM05D003918 ORTHO05D004494 1.1e-37 159.5 76 94.7
FvH4_3g30520 Fragaria vesca HOM05D003918 ORTHO05D004494 1.1e-37 159.5 76 94.7
FAN11G2739 Fragaria x ananassa HOM05D003918 ORTHO05D004494 1.1e-37 159.5 76 94.7
FAN21G0274 Fragaria x ananassa HOM05D003918 ORTHO05D004494 1.1e-37 159.5 76 94.7
Manes.04G012300 Manihot esculenta HOM05D003918 ORTHO05D004494 1.1e-37 159.5 76 94.7
Manes.11G152900 Manihot esculenta HOM05D003918 ORTHO05D004494 1.1e-37 159.5 76 94.7
Nitab4.5_0000173g0230 Nicotiana tabacum HOM05D003918 ORTHO05D004494 1.1e-37 159.5 76 94.7
Peaxi162Scf00983g00019 Petunia axillaris HOM05D003918 ORTHO05D004494 1.1e-37 159.5 76 94.7
PGR119G0927 Punica granatum HOM05D003918 ORTHO05D004494 1.1e-37 159.5 76 96.1
QL01p014884 Quercus lobata HOM05D003918 ORTHO05D004494 1.1e-37 159.5 76 94.7
Rhsim01G0210200 Rhododendron simsii HOM05D003918 ORTHO05D004494 1.1e-37 159.5 76 96.1
RcHm_v2.0_Chr5g0056481 Rosa chinensis HOM05D003918 ORTHO05D004494 1.1e-37 159.5 76 94.7
Sed0005005 Sechium edule HOM05D003918 ORTHO05D004494 1.1e-37 159.5 76 94.7
Sopen11g026220 Solanum pennellii HOM05D003918 ORTHO05D004494 1.1e-37 159.5 76 94.7
PGSC0003DMG402000458 Solanum tuberosum HOM05D003918 ORTHO05D004494 1.1e-37 159.5 76 94.7
AT2G27960 Arabidopsis thaliana HOM05D003918 ORTHO05D004494 1.4e-37 159.1 76 94.7
Haze_03482 Corylus avellana HOM05D003918 ORTHO05D004494 1.4e-37 159.1 76 94.7
TAR633G2652 Trochodendron aralioides HOM05D003918 ORTHO05D004494 1.4e-37 159.1 76 94.7
CiPaw.14G106800 Carya illinoinensis HOM05D003918 ORTHO05D004494 1.8e-37 158.7 76 94.7
Dinv16240 Davidia involucrata HOM05D003918 ORTHO05D004494 1.8e-37 158.7 76 94.7
Gohir.A07G105200 Gossypium hirsutum HOM05D003918 ORTHO05D004494 1.8e-37 158.7 76 94.7
Gohir.D07G109300 Gossypium hirsutum HOM05D003918 ORTHO05D004494 1.8e-37 158.7 76 94.7
Gorai.001G117400 Gossypium raimondii HOM05D003918 ORTHO05D004494 1.8e-37 158.7 76 94.7
Psat0ss2518g0280 Pisum sativum HOM05D003918 ORTHO05D004494 1.8e-37 158.7 76 94.7
Actinidia07191 Actinidia chinensis HOM05D001217 ORTHO05D004494 2.4e-37 158.3 76 94.7
Aa31LG5G8120 Aethionema arabicum HOM05D003918 ORTHO05D004494 2.4e-37 158.3 76 94.7
Aqoxy1G01058 Aquilegia oxysepala HOM05D003918 ORTHO05D004494 2.4e-37 158.3 76 93.4
ClCG02G021690 Citrullus lanatus HOM05D003918 ORTHO05D004494 2.4e-37 158.3 76 94.7
MELO3C026958.2 Cucumis melo HOM05D003918 ORTHO05D004494 2.4e-37 158.3 76 94.7
Hund00834 Selenicereus undatus HOM05D003918 ORTHO05D004494 2.4e-37 158.3 76 94.7
vmacro03250 Vaccinium macrocarpon HOM05D003918 ORTHO05D004494 2.4e-37 158.3 75 94.7
Lj1A213T32 Lonicera japonica HOM05D003918 ORTHO05D004494 3.1e-37 157.9 76 94.7
Oeu040442.1 Olea europaea HOM05D003918 ORTHO05D004494 3.1e-37 157.9 76 93.4
THA.LOC104815736 Tarenaya hassleriana HOM05D003918 ORTHO05D004494 3.1e-37 157.9 76 93.4
TAR369G0366 Trochodendron aralioides HOM05D003918 ORTHO05D004494 3.1e-37 157.9 76 93.4
CANSAT64G2716 Cannabis sativa HOM05D003918 ORTHO05D004494 4.0e-37 157.5 76 94.7
CDE09G0194 Ceratophyllum demersum HOM05D003918 ORTHO05D004494 4.0e-37 157.5 76 92.1
Duzib168G2331 Durio zibethinus HOM05D003918 ORTHO05D004494 4.0e-37 157.5 76 94.7
GSVIVG01031454001 Vitis vinifera HOM05D003918 ORTHO05D004494 4.0e-37 157.5 76 94.7
ClCG01G013880 Citrullus lanatus HOM05D003918 ORTHO05D004494 5.3e-37 157.1 76 93.4
Ciclev10029696m.g Citrus clementina HOM05D003918 ORTHO05D004494 5.3e-37 157.1 76 93.4
Haze_23526 Corylus avellana HOM05D001217 ORTHO05D001097 5.3e-37 157.1 76 93.4
MBI17_g16530_MAGBIO Magnolia biondii HOM05D003918 ORTHO05D004494 5.3e-37 157.1 75 94.7
Nn2g13876 Nelumbo nucifera HOM05D003918 ORTHO05D004494 5.3e-37 157.1 76 93.4
Os03g0146300 Oryza sativa ssp. japonica HOM05D003918 ORTHO05D004494 5.3e-37 157.1 75 94.7
CARHR120670 Cardamine hirsuta HOM05D003918 ORTHO05D004494 6.9e-37 156.8 76 93.4
Potri.009G004000 Populus trichocarpa HOM05D003918 ORTHO05D004494 6.9e-37 156.8 76 93.4
Carub.0004s0872 Capsella rubella HOM05D003918 ORTHO05D004494 9.0e-37 156.4 76 94.7
Oeu008363.1 Olea europaea HOM05D003918 ORTHO05D004494 9.0e-37 156.4 76 92.1
EL10Ac9g21015 Beta vulgaris HOM05D003918 ORTHO05D004494 1.2e-36 156.0 76 93.4
Dinv29385 Davidia involucrata HOM05D003918 ORTHO05D004494 1.2e-36 156.0 76 93.4
FAN25G0673 Fragaria x ananassa HOM05D003918 ORTHO05D004494 1.2e-36 156.0 76 93.4
PSO339G4781 Papaver somniferum HOM05D003918 ORTHO05D004494 1.2e-36 156.0 76 92.1
Sabra09G0001700 Salix brachista HOM05D003918 ORTHO05D004494 1.2e-36 156.0 76 93.4
THA.LOC104826394 Tarenaya hassleriana HOM05D003918 ORTHO05D004494 1.2e-36 156.0 76 93.4
Eucgr.B03920 Eucalyptus grandis HOM05D003918 ORTHO05D004494 1.5e-36 155.6 74 94.6
HanXRQChr11g0346091 Helianthus annuus HOM05D003918 ORTHO05D004494 1.5e-36 155.6 75 94.7
Potri.004G217500 Populus trichocarpa HOM05D003918 ORTHO05D004494 1.5e-36 155.6 76 94.7
BcaB03g11846 Brassica carinata HOM05D003918 ORTHO05D004494 2.0e-36 155.2 76 93.4
CsaV3_1G014150 Cucumis sativus L. HOM05D003918 ORTHO05D004494 2.0e-36 155.2 76 93.4
ECA248G3596 Erigeron canadensis HOM05D003918 ORTHO05D004494 2.0e-36 155.2 75 94.7
Oeu007724.1 Olea europaea HOM05D003918 ORTHO05D004494 2.0e-36 155.2 76 93.4
Prupe.6G113800 Prunus persica HOM05D003918 ORTHO05D004494 2.0e-36 155.2 76 93.4
Rhsim13G0101600 Rhododendron simsii HOM05D003918 ORTHO05D004494 2.0e-36 155.2 75 93.3
Sed0024739 Sechium edule HOM05D003918 ORTHO05D004494 2.0e-36 155.2 76 93.4
unitig_899.g14962 Utricularia gibba HOM05D003918 ORTHO05D004494 2.0e-36 155.2 76 93.4
CAN.G246.3 Capsicum annuum HOM05D003918 ORTHO05D004494 2.6e-36 154.8 76 90.8
AUR62041324 Chenopodium quinoa HOM05D003918 ORTHO05D004494 2.6e-36 154.8 76 92.1
Lalb_Chr19g0136871 Lupinus albus HOM05D003918 ORTHO05D004494 2.6e-36 154.8 75 93.3
SalBow6G1569 Salvia bowleyana HOM05D003918 ORTHO05D004494 2.6e-36 154.8 76 92.1
AL4G22230 Arabidopsis lyrata HOM05D003918 ORTHO05D004494 3.4e-36 154.5 76 90.8
AT2G27970 Arabidopsis thaliana HOM05D003918 ORTHO05D004494 3.4e-36 154.5 76 90.8
Carub.0004s0873 Capsella rubella HOM05D003918 ORTHO05D004494 3.4e-36 154.5 76 90.8
Thhalv10017678m.g Eutrema salsugineum HOM05D003918 ORTHO05D004494 3.4e-36 154.5 76 90.8
Oeu007309.2 Olea europaea HOM05D003918 ORTHO05D004494 3.4e-36 154.5 76 92.1
PGSC0003DMG400018822 Solanum tuberosum HOM05D003918 ORTHO05D004494 3.4e-36 154.5 76 93.4
HanXRQChr01g0019451 Helianthus annuus HOM05D003918 ORTHO05D004494 4.5e-36 154.1 75 93.3
Lsat_1_v5_gn_1_64981 Lactuca sativa HOM05D003918 ORTHO05D004494 4.5e-36 154.1 75 93.3
Lalb_Chr03g0027731 Lupinus albus HOM05D003918 ORTHO05D004494 4.5e-36 154.1 76 92.1
MD03G1128000 Malus domestica HOM05D003918 ORTHO05D004494 4.5e-36 154.1 76 92.1
MD11G1149400 Malus domestica HOM05D003918 ORTHO05D004494 4.5e-36 154.1 76 92.1
Oeu000602.1 Olea europaea HOM05D003918 ORTHO05D004494 4.5e-36 154.1 76 90.8
Sp4g10790 Schrenkiella parvula HOM05D003918 ORTHO05D004494 4.5e-36 154.1 76 92.1
Ah.01g016010 Amaranthus hybridus HOM05D003918 ORTHO05D004494 5.8e-36 153.7 76 92.1
ATR0043G026 Amborella trichopoda HOM05D003918 ORTHO05D004494 7.6e-36 153.3 75 90.7
CARHR120680 Cardamine hirsuta HOM05D003918 ORTHO05D004494 7.6e-36 153.3 76 90.8
Thhalv10017487m.g Eutrema salsugineum HOM05D003918 ORTHO05D004494 7.6e-36 153.3 75 93.3
ECA233G3711 Erigeron canadensis HOM05D003918 ORTHO05D004494 9.9e-36 152.9 75 92.0
FAN16G1510 Fragaria x ananassa HOM05D003918 ORTHO05D004494 9.9e-36 152.9 82 87.8
PSO339G2710 Papaver somniferum HOM05D003918 ORTHO05D004494 9.9e-36 152.9 76 88.2
PSO801G0480 Papaver somniferum HOM05D003918 ORTHO05D004494 9.9e-36 152.9 76 88.2
BcaC01g00919 Brassica carinata HOM05D003918 ORTHO05D004494 1.3e-35 152.5 76 90.8
A08p17020 Brassica napus HOM05D003918 ORTHO05D004494 1.3e-35 152.5 76 90.8
BraA08t33664Z Brassica rapa HOM05D003918 ORTHO05D004494 1.3e-35 152.5 76 90.8
Migut.D02301 Erythranthe guttata HOM05D003918 ORTHO05D004494 1.7e-35 152.1 76 92.1
Lsat_1_v5_gn_6_43541 Lactuca sativa HOM05D003918 ORTHO05D004494 1.7e-35 152.1 75 90.7
C03p85930 Brassica napus HOM05D003918 ORTHO05D004494 4.9e-35 150.6 75 90.7
Cpa.g.sc47.8 Carica papaya HOM05D003918 ORTHO05D004494 4.9e-35 150.6 75 89.3
Nitab4.5_0003880g0020 Nicotiana tabacum HOM05D003918 ORTHO05D004494 4.9e-35 150.6 74 91.9
SEGI_17224 Sequoiadendron giganteum HOM05D003918 ORTHO05D004494 4.9e-35 150.6 75 89.3
BcaB06g28178 Brassica carinata HOM05D003918 ORTHO05D004494 8.4e-35 149.8 74 90.5
SalBow3G4245 Salvia bowleyana HOM05D003918 ORTHO05D004494 1.1e-34 149.4 75 89.3
SEGI_19027 Sequoiadendron giganteum HOM05D003918 ORTHO05D004494 1.4e-34 149.1 75 88.0
MELO3C004864.2 Cucumis melo HOM05D003918 ORTHO05D004494 5.5e-34 147.1 86 82.6
Hma1.2p1_0772F.1_g215980 Hydrangea macrophylla HOM05D003918 ORTHO05D004494 5.5e-34 147.1 92 78.3
Pp3c14_11680 Physcomitrium patens HOM05D003918 ORTHO05D004494 7.1e-34 146.7 75 88.0
Pp3c2_6200 Physcomitrium patens HOM05D003918 ORTHO05D004494 7.1e-34 146.7 75 88.0
SMO116G0276 Selaginella moellendorffii HOM05D003918 ORTHO05D004494 7.1e-34 146.7 76 85.5
Zm00001eb003750 Zea mays HOM05D003918 ORTHO05D004494 7.1e-34 146.7 76 85.5
Mapoly0001s0011 Marchantia polymorpha HOM05D003918 ORTHO05D004494 9.3e-34 146.4 75 88.0
BcaC02g08219 Brassica carinata HOM05D003918 ORTHO05D004494 6.0e-33 143.7 74 85.1
A04p21230 Brassica napus HOM05D003918 ORTHO05D004494 6.0e-33 143.7 74 85.1
C04p57080 Brassica napus HOM05D003918 ORTHO05D004494 6.0e-33 143.7 74 85.1
BolC4t27242H Brassica oleracea HOM05D003918 ORTHO05D004494 6.0e-33 143.7 74 85.1
Glyma.12G083700 Glycine max HOM05D003918 ORTHO05D004494 6.0e-33 143.7 76 86.8
PRCOL_00005401 Prasinoderma coloniale HOM05D003918 ORTHO05D004494 5.1e-32 140.6 73 84.9
Cre03.g180350 Chlamydomonas reinhardtii HOM05D003918 ORTHO05D004494 5.6e-31 137.1 70 85.7
Phvul.011G088400 Phaseolus vulgaris HOM05D003918 ORTHO05D004494 7.4e-31 136.7 76 78.9
SMO367G0337 Selaginella moellendorffii HOM05D003918 ORTHO05D004494 6.9e-29 130.2 69 79.7
CDE02G4651 Ceratophyllum demersum HOM05D003918 ORTHO05D004494 2.0e-28 128.6 76 82.9
MCO11G605 Micromonas commoda HOM05D003918 ORTHO05D004494 2.6e-28 128.3 68 82.4
MBI16_g13165_MAGBIO Magnolia biondii HOM05D003918 ORTHO05D004494 5.8e-28 127.1 88 69.3
CsaV3_6G014430 Cucumis sativus L. HOM05D003918 ORTHO05D004494 1.1e-26 122.9 59 93.2
Zm00001eb012500 Zea mays HOM05D003918 ORTHO05D004494 1.1e-26 122.9 58 94.8
SEGI_02290 Sequoiadendron giganteum HOM05D003918 ORTHO05D004494 1.9e-26 122.1 58 93.1
CBR_g2791 Chara braunii HOM05D003918 ORTHO05D004494 3.5e-25 117.9 59 84.7
MBI11_g44590_MAGBIO Magnolia biondii HOM05D003918 ORTHO05D004494 8.7e-24 113.2 60 83.3
BcaB02g10127 Brassica carinata HOM05D003918 ORTHO05D004494 3.4e-20 101.3 53 83.0
Actinidia24153 Actinidia chinensis HOM05D003918 ORTHO05D004494 7.6e-20 100.1 55 87.3
TPR.G31695 Trifolium pratense HOM05D003918 ORTHO05D004494 1.7e-19 99.0 48 95.8
ATR0760G002 Amborella trichopoda HOM05D003918 ORTHO05D004494 1.1e-15 86.3 38 94.7
Actinidia03687 Actinidia chinensis HOM05D003918 ORTHO05D004494 1.9e-15 85.5 44 88.6
AagrBONN_evm.TU.Sc2ySwM_117.701 Anthoceros agrestis HOM05D005424 ORTHO05D006726 2.8e-14 81.6 46 78.3
Nn2g10486 Nelumbo nucifera HOM05D003918 ORTHO05D004494 4.8e-14 80.9 38 89.5
BcaC05g28675 Brassica carinata HOM05D003918 ORTHO05D004494 6.9e-13 77.0 39 79.5
BolC5t33525H Brassica oleracea HOM05D003918 ORTHO05D004494 6.9e-13 77.0 39 79.5
CSS0049200 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 6.9e-13 77.0 39 87.2
Thecc.08G095400 Theobroma cacao HOM05D003918 ORTHO05D004494 6.9e-13 77.0 54 66.7
Zm00001eb191010 Zea mays HOM05D003918 ORTHO05D004494 1.2e-12 76.3 76 52.6
Nn6g35195 Nelumbo nucifera HOM05D003918 ORTHO05D004494 2.6e-12 75.1 37 94.6
Migut.N02540 Erythranthe guttata HOM05D003918 ORTHO05D004494 4.5e-12 74.3 47 78.7
CSS0021242 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 5.9e-12 73.9 64 60.9
SGA_v2.0_scaffold50G18575 Striga asiatica HOM05D003918 ORTHO05D004494 1.0e-11 73.2 53 69.8
Ah.03g143830 Amaranthus hybridus HOM05D003918 ORTHO05D004494 7.2e-10 67.0 38 86.8
Gohir.A02G090001 Gossypium hirsutum HOM05D003918 ORTHO05D004494 4.6e-09 64.3 38 81.6
Nn4g23314 Nelumbo nucifera HOM05D003918 ORTHO05D004494 6.1e-09 63.9 29 89.7
Nn1g02037 Nelumbo nucifera HOM05D003918 ORTHO05D004494 1.8e-08 62.4 51 56.9
Ah.09g226860 Amaranthus hybridus HOM05D003918 ORTHO05D004494 7.4e-07 57.0 38 78.9
MBI10_g35299_MAGBIO Magnolia biondii HOM05D003918 ORTHO05D004494 6.3e-06 53.9 29 82.8


User provided reference genes

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