Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 2.6e-194 682.2 418 100.0
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 8.9e-131 471.1 382 74.3
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 2.6e-130 469.5 380 70.3
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 5.8e-130 468.4 381 64.6
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 7.6e-130 468.0 386 66.8
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 2.2e-129 466.5 379 65.7
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 2.9e-129 466.1 388 67.0
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 3.8e-129 465.7 379 64.9
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 3.2e-128 462.6 382 67.5
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 4.2e-128 462.2 379 73.1
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 7.1e-128 461.5 383 65.0
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 9.3e-128 461.1 377 65.8
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 4.6e-127 458.8 378 67.5
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 7.8e-127 458.0 394 70.1
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 3.0e-126 456.1 395 66.6
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 3.9e-126 455.7 374 74.6
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 5.1e-126 455.3 396 70.7
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 1.1e-125 454.1 383 71.5
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 1.9e-125 453.4 395 71.9
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 1.9e-125 453.4 386 71.2
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 3.3e-125 452.6 384 64.3
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 3.3e-125 452.6 381 71.1
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 3.3e-125 452.6 381 70.3
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 1.3e-124 450.7 381 71.7
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 1.3e-124 450.7 383 72.6
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 1.6e-124 450.3 375 74.4
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 1.6e-124 450.3 385 71.4
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 3.6e-124 449.1 378 71.4
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 3.6e-124 449.1 382 66.0
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 4.8e-124 448.7 380 71.3
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 4.8e-124 448.7 390 70.3
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 8.1e-124 448.0 381 70.9
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 2.4e-123 446.4 380 71.1
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 3.1e-123 446.0 381 71.7
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 3.1e-123 446.0 392 72.2
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 3.4e-122 442.6 395 68.9
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 5.8e-122 441.8 374 69.8
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 7.6e-122 441.4 395 68.9
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 7.6e-122 441.4 406 69.7
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 9.9e-122 441.0 373 69.7
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 3.8e-121 439.1 395 63.0
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 4.9e-121 438.7 395 60.0
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 1.1e-120 437.6 374 70.6
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 2.4e-120 436.4 383 60.6
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 3.2e-120 436.0 396 69.7
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 3.2e-120 436.0 395 60.8
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 9.3e-120 434.5 380 67.4
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 9.3e-120 434.5 380 71.1
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 2.7e-119 433.0 392 68.1
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 1.0e-118 431.0 321 72.0
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 1.0e-118 431.0 343 69.1
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 1.3e-118 430.6 393 62.8
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 5.1e-118 428.7 370 61.1
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 5.1e-118 428.7 379 66.2
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 6.7e-118 428.3 368 63.3
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 1.1e-117 427.6 396 59.6
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 3.3e-117 426.0 330 72.4
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 9.6e-117 424.5 398 59.5
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 9.6e-117 424.5 389 63.8
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 1.6e-116 423.7 424 55.2
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 2.8e-116 422.9 387 68.0
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 3.7e-116 422.5 402 63.2
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 4.8e-116 422.2 402 58.0
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 4.8e-116 422.2 378 61.4
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 2.4e-115 419.9 395 60.8
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 2.4e-115 419.9 378 65.3
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 2.4e-115 419.9 343 69.4
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 5.3e-115 418.7 378 58.2
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 9.0e-115 417.9 378 58.2
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 3.4e-114 416.0 379 65.7
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 4.5e-114 415.6 389 65.6
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 1.3e-113 414.1 399 60.2
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 1.3e-113 414.1 399 60.2
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 1.7e-113 413.7 366 68.9
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 4.9e-113 412.1 338 70.7
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 1.1e-112 411.0 398 60.8
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 1.1e-112 411.0 398 60.8
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 2.4e-112 409.8 398 59.5
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 3.2e-112 409.5 394 62.7
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 5.5e-112 408.7 392 65.1
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 2.1e-111 406.8 395 66.1
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 2.7e-111 406.4 347 68.9
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.5e-111 406.0 396 65.2
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.5e-111 406.0 394 64.5
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 7.9e-111 404.8 389 65.3
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 7.9e-111 404.8 395 63.8
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 1.0e-110 404.4 345 69.6
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 1.0e-110 404.4 345 69.6
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 1.3e-110 404.1 328 64.6
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 1.8e-110 403.7 360 65.0
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 2.3e-110 403.3 391 59.1
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.3e-110 403.3 394 65.0
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 3.0e-110 402.9 396 64.4
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 5.6e-109 398.7 349 68.8
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 2.1e-108 396.7 339 61.4
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 2.8e-108 396.4 390 63.8
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 3.7e-108 396.0 335 71.0
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 1.4e-107 394.0 354 62.1
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 9.0e-107 391.3 353 68.3
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 4.5e-106 389.0 338 58.6
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 2.2e-105 386.7 397 58.9
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 9.3e-104 381.3 354 60.7
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 1.0e-102 377.9 323 66.6
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 3.9e-102 375.9 317 66.2
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 3.9e-102 375.9 340 66.5
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 3.9e-102 375.9 297 70.7
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 5.1e-102 375.6 340 64.7
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 4.3e-101 372.5 290 76.2
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 9.7e-101 371.3 348 64.9
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.6e-100 370.5 348 64.7
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.2e-100 370.2 340 63.5
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 3.7e-100 369.4 327 57.8
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 2.9e-97 359.8 326 66.3
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 6.5e-97 358.6 359 62.1
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 1.3e-92 344.4 399 51.4
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 1.2e-90 337.8 340 61.2
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 5.5e-88 328.9 318 61.9
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 3.9e-86 322.8 334 53.6
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 7.4e-85 318.5 346 50.6
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 1.1e-83 314.7 339 49.9
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.3e-81 307.8 412 47.8
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 5.0e-81 305.8 336 51.8
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 8.5e-81 305.1 325 50.8
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 2.5e-80 303.5 158 87.3
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 1.0e-78 298.1 158 87.3
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 4.8e-76 289.3 308 50.3
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 2.4e-75 287.0 369 58.8
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 4.7e-63 246.1 272 64.0
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 1.2e-61 241.5 270 64.1
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 2.8e-60 236.9 127 85.0
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 5.5e-56 222.6 284 60.2
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 1.7e-52 211.1 111 85.6
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 6.6e-49 199.1 105 84.8
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 4.7e-47 193.0 117 75.2
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 9.8e-45 185.3 270 47.4
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 5.4e-43 179.5 313 36.4
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.0e-41 175.3 165 54.5
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 7.5e-37 159.1 89 78.7
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 6.4e-36 156.0 153 60.1
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 7.5e-29 132.5 146 54.8
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 4.9e-28 129.8 256 34.4
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 9.9e-21 105.5 64 78.1
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 1.1e-14 85.5 70 54.3
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 1.2e-13 82.0 127 41.7


User provided reference genes

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