Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G2146 Punica granatum HOM05D003500 ORTHO05D003919 1.1e-136 490.0 258 100.0
Cfa002069 Carpinus fangiana HOM05D003500 ORTHO05D003919 4.8e-50 202.2 254 51.2
Haze_16428 Corylus avellana HOM05D003500 ORTHO05D003919 1.2e-45 187.6 287 45.6
Prupe.3G070800 Prunus persica HOM05D003500 ORTHO05D003919 5.7e-43 178.7 282 45.0
Thecc.06G088400 Theobroma cacao HOM05D003500 ORTHO05D003919 2.8e-42 176.4 282 44.3
FvH4_6g31220 Fragaria vesca HOM05D003500 ORTHO05D003919 4.8e-42 175.6 254 45.3
Potri.003G055200 Populus trichocarpa HOM05D003500 ORTHO05D003919 6.3e-42 175.3 274 43.1
TWI18G0570 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 8.2e-42 174.9 258 49.6
FAN14G5419 Fragaria x ananassa HOM05D003500 ORTHO05D003919 5.3e-41 172.2 261 44.1
RcHm_v2.0_Chr2g0137891 Rosa chinensis HOM05D003500 ORTHO05D003919 5.3e-41 172.2 264 43.9
Eucgr.F03015 Eucalyptus grandis HOM05D003500 ORTHO05D003919 6.9e-41 171.8 260 46.2
MD17G1194800 Malus domestica HOM05D003500 ORTHO05D003919 3.4e-40 169.5 276 42.8
CiPaw.01G239100 Carya illinoinensis HOM05D003500 ORTHO05D003919 2.5e-38 163.3 202 49.5
ClCG07G013080 Citrullus lanatus HOM05D003500 ORTHO05D003919 4.2e-38 162.5 307 40.7
CsaV3_3G025090 Cucumis sativus L. HOM05D003500 ORTHO05D003919 5.5e-38 162.2 298 41.3
Duzib235G1266 Durio zibethinus HOM05D003500 ORTHO05D003919 5.5e-38 162.2 198 48.5
Ciclev10027012m.g Citrus clementina HOM05D003500 ORTHO05D003919 3.0e-36 156.4 283 41.3
Manes.11G047100 Manihot esculenta HOM05D003500 ORTHO05D003919 3.0e-36 156.4 273 42.5
Sed0015651 Sechium edule HOM05D003500 ORTHO05D003919 3.9e-36 156.0 296 40.2
vmacro18911 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 3.9e-36 156.0 306 40.8
QL05p023510 Quercus lobata HOM05D003500 ORTHO05D003919 5.1e-36 155.6 261 42.1
COL.COLO4_30382 Corchorus olitorius HOM05D003500 ORTHO05D003919 2.2e-34 150.2 253 40.7
CANSAT56G2888 Cannabis sativa HOM05D003500 ORTHO05D003919 8.2e-34 148.3 139 60.4
Oeu000451.1 Olea europaea HOM05D003500 ORTHO05D003919 8.2e-34 148.3 298 39.9
VMungo0331G1412 Vigna mungo HOM05D003500 ORTHO05D003919 1.1e-33 147.9 315 38.4
Gohir.A02G121400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 4.1e-33 146.0 293 36.9
Gohir.D03G063800 Gossypium hirsutum HOM05D003500 ORTHO05D003919 6.9e-33 145.2 139 57.6
Glyma.08G206700 Glycine max HOM05D003500 ORTHO05D003919 9.1e-33 144.8 317 39.1
Ca_20390_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 5.9e-32 142.1 259 42.5
Dinv30507 Davidia involucrata HOM05D003500 ORTHO05D003919 5.9e-32 142.1 133 60.9
Gorai.002G059400 Gossypium raimondii HOM05D003500 ORTHO05D003919 5.9e-32 142.1 293 36.2
Thhalv10012010m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 2.2e-31 140.2 253 41.1
Rhsim08G0221500 Rhododendron simsii HOM05D003500 ORTHO05D003919 2.2e-31 140.2 227 43.2
C06p07810 Brassica napus HOM05D003500 ORTHO05D003919 5.0e-31 139.0 259 41.7
BolC6t35867H Brassica oleracea HOM05D003500 ORTHO05D003919 6.5e-31 138.7 259 41.3
Sed0003187 Sechium edule HOM05D003500 ORTHO05D003919 6.5e-31 138.7 293 35.8
Medtr4g012520 Medicago truncatula HOM05D003500 ORTHO05D003919 8.5e-31 138.3 301 37.2
A06p01860 Brassica napus HOM05D003500 ORTHO05D003919 1.4e-30 137.5 257 41.2
QL12p026085 Quercus lobata HOM05D003500 ORTHO05D003919 1.4e-30 137.5 286 38.5
TAR624G1157 Trochodendron aralioides HOM05D003500 ORTHO05D003919 1.9e-30 137.1 301 38.5
BraA06t23403Z Brassica rapa HOM05D003500 ORTHO05D003919 2.5e-30 136.7 257 40.9
Peaxi162Scf00015g10038 Petunia axillaris HOM05D003500 ORTHO05D003919 1.2e-29 134.4 177 46.9
Glyma.07G006100 Glycine max HOM05D003500 ORTHO05D003919 3.6e-29 132.9 303 38.3
Sc12g0009290 Simmondsia chinensis HOM05D003500 ORTHO05D003919 4.7e-29 132.5 282 37.2
Nitab4.5_0000671g0100 Nicotiana tabacum HOM05D003500 ORTHO05D003919 7.9e-29 131.7 246 40.7
THA.LOC104810618 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 1.4e-28 131.0 261 42.9
Nitab4.5_0005851g0060 Nicotiana tabacum HOM05D003500 ORTHO05D003919 1.8e-28 130.6 187 44.9
Sp1g38960 Schrenkiella parvula HOM05D003500 ORTHO05D003919 3.0e-28 129.8 258 38.4
Gorai.001G029300 Gossypium raimondii HOM05D003500 ORTHO05D003919 3.9e-28 129.4 258 34.5
Psat7g252240 Pisum sativum HOM05D003500 ORTHO05D003919 3.9e-28 129.4 300 38.7
MSTRG.4733 Avicennia marina HOM05D003500 ORTHO05D003919 2.0e-27 127.1 268 38.1
arahy.Tifrunner.gnm1.ann1.AD7SDK Arachis hypogaea HOM05D003500 ORTHO05D003919 3.3e-27 126.3 319 33.5
Carub.0001s4135 Capsella rubella HOM05D003500 ORTHO05D003919 3.3e-27 126.3 260 37.7
Migut.I00867 Erythranthe guttata HOM05D003500 ORTHO05D003919 4.4e-27 125.9 257 39.3
BcaC08g43415 Brassica carinata HOM05D003500 ORTHO05D003919 5.7e-27 125.6 251 39.4
Lj3g0021763 Lotus japonicus HOM05D003500 ORTHO05D003919 7.4e-27 125.2 281 38.1
SGA_v2.0_scaffold68G23002 Striga asiatica HOM05D003500 ORTHO05D003919 9.7e-27 124.8 265 38.9
Actinidia32755 Actinidia chinensis HOM05D003500 ORTHO05D003919 1.3e-26 124.4 257 40.9
Solyc03g120180.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 1.3e-26 124.4 149 51.7
arahy.Tifrunner.gnm1.ann1.Y86J0E Arachis hypogaea HOM05D003500 ORTHO05D003919 1.7e-26 124.0 304 33.6
MELO3C012963.2 Cucumis melo HOM05D003500 ORTHO05D003919 4.8e-26 122.5 275 37.8
RcHm_v2.0_Chr6g0305551 Rosa chinensis HOM05D003500 ORTHO05D003919 6.3e-26 122.1 262 37.8
Lalb_Chr04g0262681 Lupinus albus HOM05D003500 ORTHO05D003919 8.2e-26 121.7 301 35.5
Phvul.010G150500 Phaseolus vulgaris HOM05D003500 ORTHO05D003919 8.2e-26 121.7 329 35.6
CiPaw.07G208500 Carya illinoinensis HOM05D003500 ORTHO05D003919 1.1e-25 121.3 289 36.7
CARHR042490 Cardamine hirsuta HOM05D003500 ORTHO05D003919 1.4e-25 120.9 257 40.1
Potri.018G035800 Populus trichocarpa HOM05D003500 ORTHO05D003919 1.4e-25 120.9 275 35.3
SalBow2G3431 Salvia bowleyana HOM05D003500 ORTHO05D003919 1.8e-25 120.6 263 38.0
Duzib168G0612 Durio zibethinus HOM05D003500 ORTHO05D003919 2.4e-25 120.2 294 38.1
AT1G52343 Arabidopsis thaliana HOM05D003500 ORTHO05D003919 3.1e-25 119.8 255 37.6
Thecc.09G037900 Theobroma cacao HOM05D003500 ORTHO05D003919 3.1e-25 119.8 296 33.4
Gohir.A07G024400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 4.1e-25 119.4 291 34.4
FAN20G2191 Fragaria x ananassa HOM05D003500 ORTHO05D003919 5.3e-25 119.0 269 36.8
Gohir.D07G028000 Gossypium hirsutum HOM05D003500 ORTHO05D003919 7.0e-25 118.6 290 33.8
Sabra03G0031200 Salix brachista HOM05D003500 ORTHO05D003919 9.1e-25 118.2 150 46.7
Actinidia15719 Actinidia chinensis HOM05D003500 ORTHO05D003919 2.0e-24 117.1 294 34.7
Lj8A606T22 Lonicera japonica HOM05D003500 ORTHO05D003919 2.0e-24 117.1 289 33.6
Prupe.1G454700 Prunus persica HOM05D003500 ORTHO05D003919 2.6e-24 116.7 273 35.5
Haze_21819 Corylus avellana HOM05D003500 ORTHO05D003919 4.5e-24 115.9 297 35.7
Migut.D01030 Erythranthe guttata HOM05D003500 ORTHO05D003919 4.5e-24 115.9 268 34.7
Sabra18G0036300 Salix brachista HOM05D003500 ORTHO05D003919 5.9e-24 115.5 278 34.5
Manes.04G123600 Manihot esculenta HOM05D003500 ORTHO05D003919 7.7e-24 115.2 239 38.1
BcaB02g11002 Brassica carinata HOM05D003500 ORTHO05D003919 1.0e-23 114.8 247 36.0
SGA_v2.0_scaffold37G14827 Striga asiatica HOM05D003500 ORTHO05D003919 1.0e-23 114.8 262 36.6
Cfa013328 Carpinus fangiana HOM05D003500 ORTHO05D003919 1.7e-23 114.0 299 35.1
Dinv14210 Davidia involucrata HOM05D003500 ORTHO05D003919 1.7e-23 114.0 298 34.2
FAN27G2449 Fragaria x ananassa HOM05D003500 ORTHO05D003919 1.7e-23 114.0 271 36.2
FvH4_2g36330 Fragaria vesca HOM05D003500 ORTHO05D003919 2.9e-23 113.2 271 36.2
AL1G60570 Arabidopsis lyrata HOM05D003500 ORTHO05D003919 5.0e-23 112.5 240 36.7
Eucgr.C02880 Eucalyptus grandis HOM05D003500 ORTHO05D003919 6.5e-23 112.1 281 34.2
SGA_v2.0_scaffold169G38640 Striga asiatica HOM05D003500 ORTHO05D003919 2.5e-22 110.2 277 35.7
Aqoxy7G01735 Aquilegia oxysepala HOM05D003500 ORTHO05D003919 4.2e-22 109.4 328 30.2
ClCG08G012430 Citrullus lanatus HOM05D003500 ORTHO05D003919 4.2e-22 109.4 294 34.0
Duzib187G1538 Durio zibethinus HOM05D003500 ORTHO05D003919 4.2e-22 109.4 290 33.4
Rhsim07G0154900 Rhododendron simsii HOM05D003500 ORTHO05D003919 7.2e-22 108.6 284 34.2
Lalb_Chr01g0012691 Lupinus albus HOM05D003500 ORTHO05D003919 9.4e-22 108.2 135 48.9
TAR636G0685 Trochodendron aralioides HOM05D003500 ORTHO05D003919 9.4e-22 108.2 268 35.1
Actinidia14650 Actinidia chinensis HOM05D003500 ORTHO05D003919 1.2e-21 107.8 296 32.4
DCAR_003060 Daucus carota HOM05D003500 ORTHO05D003919 3.6e-21 106.3 279 34.4
Lalb_Chr03g0029341 Lupinus albus HOM05D003500 ORTHO05D003919 4.7e-21 105.9 284 31.0
CSS0016282 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 6.1e-21 105.5 193 38.9
CSS0048346 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 6.1e-21 105.5 193 38.9
MD15G1099900 Malus domestica HOM05D003500 ORTHO05D003919 6.1e-21 105.5 295 32.2
Sc09g0008940 Simmondsia chinensis HOM05D003500 ORTHO05D003919 8.0e-21 105.1 272 32.7
CsaV3_2G031120 Cucumis sativus L. HOM05D003500 ORTHO05D003919 2.3e-20 103.6 295 32.2
Hma1.2p1_0140F.1_g063720 Hydrangea macrophylla HOM05D003500 ORTHO05D003919 2.3e-20 103.6 293 34.1
CANSAT35G1218 Cannabis sativa HOM05D003500 ORTHO05D003919 3.0e-20 103.2 296 32.8
arahy.Tifrunner.gnm1.ann1.V41S3G Arachis hypogaea HOM05D003500 ORTHO05D003919 4.0e-20 102.8 280 33.6
PGR044G1892 Punica granatum HOM05D003500 ORTHO05D003919 4.0e-20 102.8 282 33.7
GSVIVG01035753001 Vitis vinifera HOM05D003500 ORTHO05D003919 5.2e-20 102.4 305 33.1
Dinv30238 Davidia involucrata HOM05D003500 ORTHO05D003919 8.8e-20 101.7 165 39.4
Manes.16G069800 Manihot esculenta HOM05D003500 ORTHO05D003919 1.5e-19 100.9 285 33.0
SHI10927 Sapria himalayana HOM05D003500 ORTHO05D003919 3.3e-19 99.8 138 44.2
TPR.G21779 Trifolium pratense HOM05D003500 ORTHO05D003919 5.7e-19 99.0 266 30.8
Ciclev10009124m.g Citrus clementina HOM05D003500 ORTHO05D003919 7.5e-19 98.6 281 30.6
MELO3C011162.2 Cucumis melo HOM05D003500 ORTHO05D003919 7.5e-19 98.6 292 32.5
Migut.E01507 Erythranthe guttata HOM05D003500 ORTHO05D003919 9.7e-19 98.2 269 32.7
CSS0048332 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 1.7e-18 97.4 292 32.9
Atru.chr7.2303 Acer truncatum HOM05D003500 ORTHO05D003919 3.7e-18 96.3 329 32.5
Phvul.011G117800 Phaseolus vulgaris HOM05D003500 ORTHO05D003919 3.7e-18 96.3 255 31.8
SalBow2G0526 Salvia bowleyana HOM05D003500 ORTHO05D003919 3.7e-18 96.3 267 32.2
MSTRG.14007 Avicennia marina HOM05D003500 ORTHO05D003919 4.8e-18 95.9 289 32.2
TPR.G31013 Trifolium pratense HOM05D003500 ORTHO05D003919 4.8e-18 95.9 264 29.5
TWI32G0121 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 8.2e-18 95.1 288 31.9
arahy.Tifrunner.gnm1.ann1.HR3BJH Arachis hypogaea HOM05D003500 ORTHO05D003919 3.1e-17 93.2 277 33.2
PSO063G0209 Papaver somniferum HOM05D003500 ORTHO05D003919 3.1e-17 93.2 351 30.2
VMungo1127G1234 Vigna mungo HOM05D003500 ORTHO05D003919 3.5e-16 89.7 253 31.2
Lsat_1_v5_gn_1_49081 Lactuca sativa HOM05D003500 ORTHO05D003919 5.9e-16 89.0 283 30.0
EL10Ac2g02525 Beta vulgaris HOM05D003500 ORTHO05D003919 7.7e-16 88.6 270 33.7
PSO782G3147 Papaver somniferum HOM05D003500 ORTHO05D003919 7.7e-16 88.6 347 30.3
Sed0000644 Sechium edule HOM05D003500 ORTHO05D003919 1.0e-15 88.2 213 33.3
vmacro05351 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 1.0e-15 88.2 268 31.7
Ca_26668_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 2.9e-15 86.7 262 31.3
BcaC01g01007 Brassica carinata HOM05D003500 ORTHO05D003919 3.8e-15 86.3 279 30.8
C03p87180 Brassica napus HOM05D003500 ORTHO05D003919 3.8e-15 86.3 291 29.6
BolC3t21020H Brassica oleracea HOM05D003500 ORTHO05D003919 3.8e-15 86.3 291 29.6
AUR62032393 Chenopodium quinoa HOM05D003500 ORTHO05D003919 5.0e-15 85.9 279 29.7
Medtr6g007370 Medicago truncatula HOM05D003500 ORTHO05D003919 5.0e-15 85.9 261 29.1
Medtr7g446310 Medicago truncatula HOM05D003500 ORTHO05D003919 5.0e-15 85.9 261 29.1
AUR62024822 Chenopodium quinoa HOM05D003500 ORTHO05D003919 8.5e-15 85.1 281 29.5
Ah.10g025530 Amaranthus hybridus HOM05D003500 ORTHO05D003919 1.5e-14 84.3 262 30.2
HanXRQChr17g0541731 Helianthus annuus HOM05D003500 ORTHO05D003919 4.2e-14 82.8 258 31.4
ECA248G2427 Erigeron canadensis HOM05D002222 ORTHO05D002354 5.5e-14 82.4 147 38.8
Oeu014656.1 Olea europaea HOM05D003500 ORTHO05D003919 5.5e-14 82.4 158 38.6
BcaB03g12755 Brassica carinata HOM05D003500 ORTHO05D003919 7.2e-14 82.0 288 32.3
Glyma.12G113900 Glycine max HOM05D003500 ORTHO05D003919 9.4e-14 81.6 263 29.3
HanXRQChr02g0053631 Helianthus annuus HOM05D003500 ORTHO05D003919 9.4e-14 81.6 260 30.8
PGSC0003DMG400014491 Solanum tuberosum HOM05D003500 ORTHO05D003919 2.1e-13 80.5 306 30.7
AT4G32680 Arabidopsis thaliana HOM05D003500 ORTHO05D003919 2.7e-13 80.1 286 25.9
BraA08t33760Z Brassica rapa HOM05D003500 ORTHO05D003919 2.7e-13 80.1 289 32.2
Sopen08g021950 Solanum pennellii HOM05D003500 ORTHO05D003919 4.7e-13 79.3 303 31.4
THA.LOC104818564 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 4.7e-13 79.3 292 29.1
Solyc08g068060.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 8.0e-13 78.6 298 31.9
CARHR240660 Cardamine hirsuta HOM05D003500 ORTHO05D003919 1.0e-12 78.2 286 29.7
HanXRQChr01g0029371 Helianthus annuus HOM05D003500 ORTHO05D003919 1.0e-12 78.2 281 31.3
Nitab4.5_0002393g0050 Nicotiana tabacum HOM05D003500 ORTHO05D003919 1.0e-12 78.2 298 30.9
A01p05660 Brassica napus HOM05D003500 ORTHO05D003919 1.4e-12 77.8 283 30.7
BcaC09g52062 Brassica carinata HOM05D003500 ORTHO05D003919 1.8e-12 77.4 290 27.6
BraA01t00536Z Brassica rapa HOM05D003500 ORTHO05D003919 2.3e-12 77.0 275 30.5
Lj3g0003659 Lotus japonicus HOM05D003500 ORTHO05D003919 2.3e-12 77.0 281 30.6
Psat7g063400 Pisum sativum HOM05D003500 ORTHO05D003919 2.3e-12 77.0 287 25.4
ECA233G0641 Erigeron canadensis HOM05D003500 ORTHO05D003919 4.0e-12 76.3 249 30.5
Hund25650 Selenicereus undatus HOM05D003500 ORTHO05D003919 5.2e-12 75.9 260 29.6
Aa31LG2G16940 Aethionema arabicum HOM05D003500 ORTHO05D003919 6.8e-12 75.5 289 30.8
BolC1t00621H Brassica oleracea HOM05D003500 ORTHO05D003919 6.8e-12 75.5 277 28.9
AL7G19060 Arabidopsis lyrata HOM05D003500 ORTHO05D003919 8.8e-12 75.1 287 27.2
Cc08_g08590 Coffea canephora HOM05D003500 ORTHO05D003919 1.5e-11 74.3 276 29.7
unitig_899.g14777 Utricularia gibba HOM05D003500 ORTHO05D003919 1.5e-11 74.3 257 34.6
Carub.0007s0785 Capsella rubella HOM05D003500 ORTHO05D003919 4.4e-11 72.8 292 27.4
CAN.G886.10 Capsicum annuum HOM05D003500 ORTHO05D003919 5.7e-11 72.4 296 29.4
Lsat_1_v5_gn_6_63900 Lactuca sativa HOM05D003500 ORTHO05D003919 7.5e-11 72.0 196 32.7
Sp7g30440 Schrenkiella parvula HOM05D003500 ORTHO05D003919 7.5e-11 72.0 298 28.2
HPP92_005532 Vanilla planifolia HOM05D003500 ORTHO05D003919 7.5e-11 72.0 277 26.4
Thhalv10025931m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 9.8e-11 71.6 289 30.1
Potri.006G244600 Populus trichocarpa HOM05D003500 ORTHO05D003919 9.1e-09 65.1 211 31.3
MBI11_g07535_MAGBIO Magnolia biondii HOM05D003500 ORTHO05D003919 1.6e-08 64.3 264 27.3
ATR0051G010 Amborella trichopoda HOM05D003500 ORTHO05D003919 2.0e-08 63.9 158 36.1
C01p06230 Brassica napus HOM05D003500 ORTHO05D003919 2.7e-08 63.5 133 34.6
Sabra06G0191500 Salix brachista HOM05D003500 ORTHO05D003919 7.7e-08 62.0 146 33.6
A08p18080 Brassica napus HOM05D003500 ORTHO05D003919 1.3e-07 61.2 131 34.4
unitig_32.g11118 Utricularia gibba HOM05D003500 ORTHO05D003919 1.7e-07 60.8 292 28.1
Nitab4.5_0000250g0140 Nicotiana tabacum HOM05D003500 ORTHO05D003919 8.5e-07 58.5 298 28.5
AL7G19270 Arabidopsis lyrata HOM05D002156 ORTHO05D003919 1.1e-06 58.2 130 31.5
Pp3c2_32720 Physcomitrium patens HOM05D003500 ORTHO05D003919 1.9e-06 57.4 278 27.0


User provided reference genes

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