Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G2093 Punica granatum HOM05D007092 ORTHO05D008947 7.5e-222 773.5 371 100.0
Eucgr.F04011 Eucalyptus grandis HOM05D007092 ORTHO05D008947 9.7e-129 464.2 281 77.2
Prupe.3G167100 Prunus persica HOM05D007092 ORTHO05D008947 1.3e-120 437.2 286 72.4
MD09G1158700 Malus domestica HOM05D007092 ORTHO05D008947 5.3e-119 431.8 320 66.2
FvH4_6g37290 Fragaria vesca HOM05D007092 ORTHO05D008947 1.6e-118 430.3 307 68.4
RcHm_v2.0_Chr2g0150121 Rosa chinensis HOM05D007092 ORTHO05D008947 2.0e-118 429.9 284 73.2
CANSAT01G0482 Cannabis sativa HOM05D007092 ORTHO05D008947 4.5e-118 428.7 280 69.3
QL05p083231 Quercus lobata HOM05D007092 ORTHO05D008947 2.9e-117 426.0 299 68.9
Manes.01G181400 Manihot esculenta HOM05D007092 ORTHO05D008947 4.0e-114 415.6 267 71.9
Ciclev10026125m.g Citrus clementina HOM05D007092 ORTHO05D008947 9.8e-113 411.0 335 61.5
Dinv37796 Davidia involucrata HOM05D007092 ORTHO05D008947 2.8e-112 409.5 270 70.0
FAN02G1258 Fragaria x ananassa HOM05D007092 ORTHO05D008947 3.7e-112 409.1 345 60.9
Atru.chr1.2779 Acer truncatum HOM05D007092 ORTHO05D008947 5.4e-111 405.2 256 73.0
GSVIVG01016136001 Vitis vinifera HOM05D007092 ORTHO05D008947 5.4e-111 405.2 278 66.5
Thhalv10018923m.g Eutrema salsugineum HOM05D007092 ORTHO05D008947 9.1e-111 404.4 263 70.7
VMungo0647G0167 Vigna mungo HOM05D007092 ORTHO05D008947 3.5e-110 402.5 250 73.2
Nn2g12583 Nelumbo nucifera HOM05D007092 ORTHO05D008947 7.7e-110 401.4 260 71.2
AT1G73090 Arabidopsis thaliana HOM05D007092 ORTHO05D008947 1.7e-109 400.2 259 69.9
Phvul.008G255700 Phaseolus vulgaris HOM05D007092 ORTHO05D008947 2.9e-109 399.4 258 70.9
Carub.0002s1986 Capsella rubella HOM05D007092 ORTHO05D008947 3.8e-109 399.1 263 69.2
AL2G32840 Arabidopsis lyrata HOM05D007092 ORTHO05D008947 5.0e-109 398.7 264 68.9
CSS0038887 Camellia sinensis var. sinensis HOM05D007092 ORTHO05D008947 8.5e-109 397.9 248 71.0
TAR383G0306 Trochodendron aralioides HOM05D007092 ORTHO05D008947 8.5e-109 397.9 250 73.6
Oeu049655.1 Olea europaea HOM05D007092 ORTHO05D008947 1.5e-108 397.1 253 71.1
Medtr4g006030 Medicago truncatula HOM05D007092 ORTHO05D008947 1.9e-108 396.7 259 69.9
Thecc.06G015800 Theobroma cacao HOM05D007092 ORTHO05D008947 2.5e-108 396.4 334 59.0
Sp5g28050 Schrenkiella parvula HOM05D007092 ORTHO05D008947 4.2e-108 395.6 264 69.3
Lj3g0013116 Lotus japonicus HOM05D007092 ORTHO05D008947 3.6e-107 392.5 274 67.2
HanXRQChr10g0311491 Helianthus annuus HOM05D007092 ORTHO05D008947 4.7e-107 392.1 250 67.6
Sc12g0010950 Simmondsia chinensis HOM05D007092 ORTHO05D008947 6.1e-107 391.7 276 66.7
arahy.Tifrunner.gnm1.ann1.U4SUAB Arachis hypogaea HOM05D007092 ORTHO05D008947 1.0e-106 391.0 267 67.4
Lsat_1_v5_gn_5_137421 Lactuca sativa HOM05D007092 ORTHO05D008947 1.0e-106 391.0 332 57.2
PGSC0003DMG400026517 Solanum tuberosum HOM05D007092 ORTHO05D008947 3.0e-106 389.4 265 66.8
TPR.G38753 Trifolium pratense HOM05D007092 ORTHO05D008947 3.0e-106 389.4 273 64.8
Solyc06g063230.3 Solanum lycopersicum HOM05D007092 ORTHO05D008947 5.2e-106 388.7 265 66.8
Sopen06g022680 Solanum pennellii HOM05D007092 ORTHO05D008947 5.2e-106 388.7 265 66.8
CARHR066060 Cardamine hirsuta HOM05D007092 ORTHO05D008947 6.8e-106 388.3 263 67.7
A02p18440 Brassica napus HOM05D007092 ORTHO05D008947 1.2e-105 387.5 264 68.6
BraA02t06883Z Brassica rapa HOM05D007092 ORTHO05D008947 1.2e-105 387.5 264 68.6
Nitab4.5_0008628g0030 Nicotiana tabacum HOM05D007092 ORTHO05D008947 1.2e-105 387.5 252 69.8
Aa31LG4G3360 Aethionema arabicum HOM05D007092 ORTHO05D008947 1.5e-105 387.1 258 67.1
arahy.Tifrunner.gnm1.ann1.2I6Q5Y Arachis hypogaea HOM05D007092 ORTHO05D008947 1.5e-105 387.1 267 67.0
Ca_20954_v3 Cicer arietinum L. HOM05D007092 ORTHO05D008947 1.5e-105 387.1 257 68.5
Glyma.07G003900 Glycine max HOM05D007092 ORTHO05D008947 1.5e-105 387.1 256 69.9
Cc04_g00380 Coffea canephora HOM05D007092 ORTHO05D008947 5.7e-105 385.2 286 64.7
ECA234G1665 Erigeron canadensis HOM05D007092 ORTHO05D008947 7.5e-105 384.8 286 60.5
Nitab4.5_0002661g0010 Nicotiana tabacum HOM05D007092 ORTHO05D008947 3.7e-104 382.5 252 67.9
CsaV3_7G033820 Cucumis sativus L. HOM05D007092 ORTHO05D008947 4.9e-104 382.1 273 67.0
BolC2t09103H Brassica oleracea HOM05D007092 ORTHO05D008947 6.3e-104 381.7 265 67.9
Lalb_Chr04g0264731 Lupinus albus HOM05D007092 ORTHO05D008947 8.3e-104 381.3 267 66.7
PSO063G1240 Papaver somniferum HOM05D007092 ORTHO05D008947 8.3e-104 381.3 261 67.0
Hma1.2p1_1104F.1_g257360 Hydrangea macrophylla HOM05D007092 ORTHO05D008947 2.4e-103 379.8 273 63.7
C02p30520 Brassica napus HOM05D007092 ORTHO05D008947 1.6e-102 377.1 265 67.5
Haze_15817 Corylus avellana HOM05D007092 ORTHO05D008947 1.6e-102 377.1 278 65.8
ClCG09G001510 Citrullus lanatus HOM05D007092 ORTHO05D008947 1.0e-101 374.4 268 67.5
Actinidia21869 Actinidia chinensis HOM05D007092 ORTHO05D008947 5.0e-101 372.1 250 67.6
Duzib160G0445 Durio zibethinus HOM05D007092 ORTHO05D008947 2.5e-100 369.8 260 66.5
Aqoxy7G03199 Aquilegia oxysepala HOM05D007092 ORTHO05D008947 1.6e-99 367.1 264 64.8
EL10Ac7g18225 Beta vulgaris HOM05D007092 ORTHO05D008947 1.6e-99 367.1 276 63.0
AUR62025584 Chenopodium quinoa HOM05D007092 ORTHO05D008947 5.2e-98 362.1 292 59.2
Sed0004999 Sechium edule HOM05D007092 ORTHO05D008947 7.5e-97 358.2 231 72.3
Peaxi162Scf00207g01537 Petunia axillaris HOM05D007092 ORTHO05D008947 1.7e-96 357.1 274 59.9
THA.LOC104823333 Tarenaya hassleriana HOM05D007092 ORTHO05D008947 1.7e-96 357.1 244 68.4
Migut.I01177 Erythranthe guttata HOM05D007092 ORTHO05D008947 1.8e-95 353.6 246 67.1
SalBow6G0042 Salvia bowleyana HOM05D007092 ORTHO05D008947 2.4e-95 353.2 254 63.8
Gohir.D10G007300 Gossypium hirsutum HOM05D007092 ORTHO05D008947 1.2e-94 350.9 270 62.2
Gorai.011G008000 Gossypium raimondii HOM05D007092 ORTHO05D008947 2.7e-94 349.7 270 61.9
ATR0580G293 Amborella trichopoda HOM05D007092 ORTHO05D008947 7.8e-94 348.2 270 60.7
Gohir.A10G007400 Gossypium hirsutum HOM05D007092 ORTHO05D008947 7.8e-94 348.2 270 61.9
COL.COLO4_22872 Corchorus olitorius HOM05D007092 ORTHO05D008947 1.0e-93 347.8 248 64.9
MBI14_g30703_MAGBIO Magnolia biondii HOM05D007092 ORTHO05D008947 1.9e-92 343.6 311 56.6
Potri.010G250100 Populus trichocarpa HOM05D007092 ORTHO05D008947 5.6e-92 342.0 265 63.0
Sabra10G0194500 Salix brachista HOM05D007092 ORTHO05D008947 8.0e-91 338.2 265 62.6
Hund18612 Selenicereus undatus HOM05D007092 ORTHO05D008947 3.2e-87 326.2 295 56.3
MELO3C024294.2 Cucumis melo HOM05D007092 ORTHO05D008947 5.4e-87 325.5 248 63.7
HPP92_017449 Vanilla planifolia HOM05D007092 ORTHO05D008947 5.0e-85 318.9 245 58.8
Lj6C21G9 Lonicera japonica HOM05D007092 ORTHO05D008947 3.4e-81 306.2 259 57.1
unitig_748.g7475 Utricularia gibba HOM05D007092 ORTHO05D008947 6.4e-80 302.0 254 59.1
AUR62001368 Chenopodium quinoa HOM05D007092 ORTHO05D008947 3.5e-78 296.2 267 54.7
arahy.Tifrunner.gnm1.ann1.65RD4S Arachis hypogaea HOM05D007092 ORTHO05D008947 1.3e-77 294.3 202 66.8
CDE07G2035 Ceratophyllum demersum HOM05D007092 ORTHO05D008947 2.3e-74 283.5 303 50.5
SGA_v2.0_scaffold122G33289 Striga asiatica HOM05D002895 ORTHO05D003286 3.9e-69 266.2 202 60.9
Lj6C3G1 Lonicera japonica HOM05D000076 ORTHO05D001279 8.1e-67 258.5 230 55.7
Psat7g263560 Pisum sativum HOM05D007092 ORTHO05D008947 1.9e-55 220.7 160 65.6
Hund18613 Selenicereus undatus HOM05D007092 ORTHO05D008947 4.2e-55 219.5 180 56.1
Pp3c13_10570 Physcomitrium patens HOM05D007092 ORTHO05D008947 1.3e-53 214.5 261 43.7
AagrBONN_evm.TU.Sc2ySwM_344.2112 Anthoceros agrestis HOM05D007092 ORTHO05D008947 6.7e-53 212.2 245 42.0
Mapoly0073s0046 Marchantia polymorpha HOM05D007092 ORTHO05D008947 1.5e-52 211.1 249 43.4
Cfa021192 Carpinus fangiana HOM05D007092 ORTHO05D008947 2.5e-52 210.3 130 71.5
FAN09G2007 Fragaria x ananassa HOM05D007092 ORTHO05D008947 9.6e-52 208.4 175 62.9
SMO230G0107 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 6.7e-45 185.7 246 39.4
arahy.Tifrunner.gnm1.ann1.NXC5E0 Arachis hypogaea HOM05D007092 ORTHO05D008947 6.9e-42 175.6 105 73.3
C02p30540 Brassica napus HOM05D007092 ORTHO05D008947 1.4e-39 167.9 115 62.6
RcHm_v2.0_Chr1g0381181 Rosa chinensis HOM05D007092 ORTHO05D008947 3.9e-37 159.8 137 61.3
arahy.Tifrunner.gnm1.ann1.DEI7NY Arachis hypogaea HOM05D007092 ORTHO05D008947 4.1e-34 149.8 80 77.5
Glyma.08G222700 Glycine max HOM05D007092 ORTHO05D008947 6.1e-30 136.0 80 71.2
SMO336G0036 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 6.7e-29 132.5 278 30.9
SEGI_20536 Sequoiadendron giganteum HOM05D007092 ORTHO05D008947 7.2e-23 112.5 84 59.5
Lj6A3T47 Lonicera japonica HOM05D007092 ORTHO05D008947 1.4e-21 108.2 61 72.1
Cpa.g.sc1009.2 Carica papaya HOM05D007092 ORTHO05D008947 4.4e-20 103.2 65 73.8
arahy.Tifrunner.gnm1.ann1.BLVE7G Arachis hypogaea HOM05D007092 ORTHO05D008947 1.8e-18 97.8 49 79.6
arahy.Tifrunner.gnm1.ann1.LQFB73 Arachis hypogaea HOM05D007092 ORTHO05D008947 1.8e-18 97.8 49 79.6
BcaC07g40307 Brassica carinata HOM05D007092 ORTHO05D008947 4.2e-15 86.7 60 58.3
arahy.Tifrunner.gnm1.ann1.QYJ7WZ Arachis hypogaea HOM05D007092 ORTHO05D008947 5.5e-15 86.3 67 64.2
arahy.Tifrunner.gnm1.ann1.TPQB3Q Arachis hypogaea HOM05D007092 ORTHO05D008947 5.5e-15 86.3 67 64.2
arahy.Tifrunner.gnm1.ann1.KBSP04 Arachis hypogaea HOM05D002221 ORTHO05D002626 1.4e-13 81.6 58 63.8
arahy.Tifrunner.gnm1.ann1.R6H1XR Arachis hypogaea HOM05D002221 ORTHO05D002626 1.4e-13 81.6 58 63.8
BcaB05g22026 Brassica carinata HOM05D007092 ORTHO05D008947 1.1e-10 72.0 60 48.3
Actinidia38794 Actinidia chinensis HOM05D007092 ORTHO05D008947 1.8e-10 71.2 56 57.1
arahy.Tifrunner.gnm1.ann1.AT2CXE Arachis hypogaea HOM05D007092 ORTHO05D008947 5.9e-09 66.2 42 66.7
Actinidia21637 Actinidia chinensis HOM05D007092 ORTHO05D008947 1.3e-08 65.1 42 61.9
TAR627G0568 Trochodendron aralioides HOM05D000264 ORTHO05D000152 3.8e-08 63.5 48 60.4
Cpa.g.sc3948.1 Carica papaya HOM05D007092 ORTHO05D008947 1.5e-07 61.6 32 75.0
SEGI_38624 Sequoiadendron giganteum HOM05D007092 ORTHO05D050975 1.9e-07 61.2 46 56.5
C03p19630 Brassica napus HOM05D000267 ORTHO05D020178 2.5e-07 60.8 34 67.6
Hund18614 Selenicereus undatus HOM05D007092 ORTHO05D008947 4.2e-07 60.1 41 65.9
C03p03960 Brassica napus HOM05D000267 ORTHO05D020178 9.4e-07 58.9 34 64.7
BolC3t12933H Brassica oleracea HOM05D000267 ORTHO05D020178 9.4e-07 58.9 34 64.7


User provided reference genes

Program Settings