Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G0280 Punica granatum HOM05D006754 ORTHO05D008403 5.4e-226 787.3 397 100.0
Sabra16G0147200 Salix brachista HOM05D006754 ORTHO05D008403 7.9e-153 544.3 405 68.1
QL01p030969 Quercus lobata HOM05D006754 ORTHO05D008403 1.0e-152 543.9 406 69.7
Potri.001G242400 Populus trichocarpa HOM05D006754 ORTHO05D008403 6.7e-152 541.2 405 67.7
Potri.009G033700 Populus trichocarpa HOM05D006754 ORTHO05D008403 1.6e-150 536.6 411 65.0
Atru.chr3.3972 Acer truncatum HOM05D006754 ORTHO05D008403 1.9e-146 523.1 399 68.4
FAN11G1342 Fragaria x ananassa HOM05D006754 ORTHO05D008403 3.0e-144 515.8 395 64.8
MD03G1088200 Malus domestica HOM05D006754 ORTHO05D008403 3.9e-144 515.4 406 64.0
FvH4_3g36800 Fragaria vesca HOM05D006754 ORTHO05D008403 5.1e-144 515.0 394 65.0
COL.COLO4_18549 Corchorus olitorius HOM05D006754 ORTHO05D008403 6.7e-144 514.6 400 65.8
Eucgr.B02322 Eucalyptus grandis HOM05D006754 ORTHO05D008403 6.7e-144 514.6 404 67.6
RcHm_v2.0_Chr5g0065861 Rosa chinensis HOM05D006754 ORTHO05D008403 7.4e-143 511.1 402 64.2
FAN25G2379 Fragaria x ananassa HOM05D006754 ORTHO05D008403 2.2e-142 509.6 393 65.6
TWI79G1092 Tripterygium wilfordii HOM05D006754 ORTHO05D008403 2.2e-142 509.6 404 64.6
Cpa.g.sc81.116 Carica papaya HOM05D006754 ORTHO05D008403 8.2e-142 507.7 401 63.3
Ciclev10030407m.g Citrus clementina HOM05D006754 ORTHO05D008403 8.2e-142 507.7 399 64.2
CiPaw.14G067200 Carya illinoinensis HOM05D006754 ORTHO05D008403 2.4e-141 506.1 404 65.1
Thecc.09G318400 Theobroma cacao HOM05D006754 ORTHO05D008403 3.1e-141 505.8 404 65.1
Haze_24130 Corylus avellana HOM05D006754 ORTHO05D008403 1.5e-140 503.4 404 65.8
CSS0030688 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 2.9e-139 499.2 400 63.8
CSS0026926 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 6.5e-139 498.0 399 63.4
FAN16G0425 Fragaria x ananassa HOM05D006754 ORTHO05D008403 4.2e-138 495.4 400 63.2
Prupe.6G072500 Prunus persica HOM05D006754 ORTHO05D008403 5.7e-135 485.0 387 63.8
Gohir.A05G094100 Gossypium hirsutum HOM05D006754 ORTHO05D008403 7.4e-135 484.6 400 63.5
Gorai.009G097800 Gossypium raimondii HOM05D006754 ORTHO05D008403 7.4e-135 484.6 400 63.5
Nn8g38772 Nelumbo nucifera HOM05D006754 ORTHO05D008403 1.8e-133 479.9 407 60.9
Manes.01G171100 Manihot esculenta HOM05D006754 ORTHO05D008403 1.5e-132 476.9 411 61.1
CANSAT56G3630 Cannabis sativa HOM05D006754 ORTHO05D008403 7.2e-130 468.0 390 62.6
VMungo1127G1194 Vigna mungo HOM05D006754 ORTHO05D008403 7.2e-130 468.0 405 61.0
Aqoxy2G02260 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 1.6e-129 466.8 406 62.8
Glyma.15G221700 Glycine max HOM05D006754 ORTHO05D008403 1.0e-128 464.2 405 59.8
arahy.Tifrunner.gnm1.ann1.826T7K Arachis hypogaea HOM05D006754 ORTHO05D008403 1.8e-128 463.4 405 61.7
Hma1.2p1_0615F.1_g189790 Hydrangea macrophylla HOM05D006754 ORTHO05D008403 1.8e-128 463.4 414 58.9
Glyma.08G227600 Glycine max HOM05D006754 ORTHO05D008403 3.0e-128 462.6 399 61.2
Psat4g178480 Pisum sativum HOM05D006754 ORTHO05D008403 3.0e-128 462.6 407 58.7
THA.LOC104799439 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 6.7e-128 461.5 381 61.4
Ca_24122_v3 Cicer arietinum L. HOM05D006754 ORTHO05D008403 2.2e-126 456.4 408 56.9
Phvul.011G187300 Phaseolus vulgaris HOM05D006754 ORTHO05D008403 6.3e-126 454.9 406 60.1
Lj2P1066T40 Lonicera japonica HOM05D006754 ORTHO05D008403 8.2e-126 454.5 411 56.9
Medtr8g044030 Medicago truncatula HOM05D006754 ORTHO05D008403 8.2e-126 454.5 426 55.4
Lj3g0006516 Lotus japonicus HOM05D006754 ORTHO05D008403 1.8e-125 453.4 405 59.0
FAN21G1313 Fragaria x ananassa HOM05D006754 ORTHO05D008403 3.1e-125 452.6 438 57.5
Solyc07g007700.3 Solanum lycopersicum HOM05D006754 ORTHO05D008403 4.1e-125 452.2 357 60.5
PGSC0003DMG400030707 Solanum tuberosum HOM05D006754 ORTHO05D008403 4.1e-125 452.2 330 63.9
Sopen07g003690 Solanum pennellii HOM05D006754 ORTHO05D008403 9.1e-125 451.1 357 60.2
THA.LOC104814881 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 1.2e-124 450.7 406 56.9
EL10Ac7g16047 Beta vulgaris HOM05D006754 ORTHO05D008403 7.7e-124 448.0 379 60.2
AT5G59500 Arabidopsis thaliana HOM05D006754 ORTHO05D008403 2.9e-123 446.0 381 58.3
PSO063G1099 Papaver somniferum HOM05D006754 ORTHO05D008403 3.8e-123 445.7 401 58.4
Aa31LG1G11840 Aethionema arabicum HOM05D006754 ORTHO05D008403 1.1e-122 444.1 378 60.6
PSO339G3555 Papaver somniferum HOM05D006754 ORTHO05D008403 1.9e-122 443.4 401 58.4
Thhalv10015639m.g Eutrema salsugineum HOM05D006754 ORTHO05D008403 3.2e-122 442.6 381 58.3
HanXRQChr05g0135011 Helianthus annuus HOM05D006754 ORTHO05D008403 3.2e-122 442.6 370 57.6
CsaV3_1G034490 Cucumis sativus L. HOM05D006754 ORTHO05D008403 1.6e-121 440.3 311 69.8
CARHR285870 Cardamine hirsuta HOM05D006754 ORTHO05D008403 6.1e-121 438.3 383 58.0
AL8G35980 Arabidopsis lyrata HOM05D006754 ORTHO05D008403 8.0e-121 438.0 381 58.3
Nitab4.5_0007132g0020 Nicotiana tabacum HOM05D006754 ORTHO05D008403 8.0e-121 438.0 288 71.5
Oeu026710.1 Olea europaea HOM05D006754 ORTHO05D008403 8.0e-121 438.0 348 62.1
Sc12g0001320 Simmondsia chinensis HOM05D006754 ORTHO05D008403 1.8e-120 436.8 384 59.4
Carub.0008s2018 Capsella rubella HOM05D006754 ORTHO05D008403 4.0e-120 435.6 394 57.6
Sp6g21200 Schrenkiella parvula HOM05D006754 ORTHO05D008403 4.0e-120 435.6 394 57.4
Nitab4.5_0000272g0070 Nicotiana tabacum HOM05D006754 ORTHO05D008403 5.2e-120 435.3 272 73.5
MSTRG.21206 Avicennia marina HOM05D006754 ORTHO05D008403 1.2e-119 434.1 320 64.4
CAN.G969.5 Capsicum annuum HOM05D006754 ORTHO05D008403 3.4e-119 432.6 392 54.3
Lsat_1_v5_gn_8_73421 Lactuca sativa HOM05D006754 ORTHO05D008403 1.3e-118 430.6 379 56.2
ClCG03G001330 Citrullus lanatus HOM05D006754 ORTHO05D008403 1.7e-118 430.3 300 71.0
Cc01_g13150 Coffea canephora HOM05D006754 ORTHO05D008403 1.7e-118 430.3 407 56.8
Sed0002230 Sechium edule HOM05D006754 ORTHO05D008403 8.3e-118 427.9 379 59.1
Migut.F00608 Erythranthe guttata HOM05D006754 ORTHO05D008403 1.1e-117 427.6 411 54.5
SalBow7G4834 Salvia bowleyana HOM05D006754 ORTHO05D008403 2.0e-116 423.3 400 56.2
BraA10t43752Z Brassica rapa HOM05D006754 ORTHO05D008403 3.5e-116 422.5 380 56.8
SalBow7G2225 Salvia bowleyana HOM05D006754 ORTHO05D008403 5.9e-116 421.8 400 56.0
BcaC04g19764 Brassica carinata HOM05D006754 ORTHO05D008403 2.2e-115 419.9 380 56.6
C09p51900 Brassica napus HOM05D006754 ORTHO05D008403 2.2e-115 419.9 380 56.6
BolC9t58053H Brassica oleracea HOM05D006754 ORTHO05D008403 2.2e-115 419.9 380 56.6
DCAR_005953 Daucus carota HOM05D006754 ORTHO05D008403 2.2e-115 419.9 414 55.3
A10p16710 Brassica napus HOM05D006754 ORTHO05D008403 6.5e-115 418.3 380 56.6
Ah.15g097770 Amaranthus hybridus HOM05D006754 ORTHO05D008403 1.5e-114 417.2 377 56.2
BcaB08g36252 Brassica carinata HOM05D006754 ORTHO05D008403 1.6e-113 413.7 380 56.3
Dinv22095 Davidia involucrata HOM05D006754 ORTHO05D008403 5.2e-112 408.7 250 77.2
Duzib168G0850 Durio zibethinus HOM05D006754 ORTHO05D008403 5.2e-112 408.7 245 76.7
AUR62001757 Chenopodium quinoa HOM05D006754 ORTHO05D008403 2.0e-111 406.8 396 52.8
unitig_37.g12673 Utricularia gibba HOM05D006754 ORTHO05D008403 5.7e-111 405.2 406 52.0
MBI14_g12133_MAGBIO Magnolia biondii HOM05D006754 ORTHO05D008403 8.3e-110 401.4 403 56.3
AUR62009543 Chenopodium quinoa HOM05D006754 ORTHO05D008403 1.8e-109 400.2 396 52.3
CDE04G0725 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 2.9e-107 392.9 324 57.7
Sed0016816 Sechium edule HOM05D006754 ORTHO05D008403 4.2e-106 389.0 369 56.4
Peaxi162Scf00122g00144 Petunia axillaris HOM05D006754 ORTHO05D008403 1.0e-104 384.4 396 53.5
CDE07G0060 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 2.6e-103 379.8 318 56.3
Gohir.D05G094600 Gossypium hirsutum HOM05D006754 ORTHO05D008403 4.5e-100 369.0 327 60.2
ATR0752G045 Amborella trichopoda HOM05D006754 ORTHO05D008403 1.7e-99 367.1 291 59.8
SGA_v2.0_scaffold51G18718 Striga asiatica HOM05D006754 ORTHO05D008403 5.0e-99 365.5 407 47.4
Dinv09390 Davidia involucrata HOM05D006754 ORTHO05D008403 5.8e-95 352.1 222 76.6
Lalb_Chr01g0007611 Lupinus albus HOM05D006754 ORTHO05D008403 2.4e-93 346.7 404 48.5
Oeu004165.1 Olea europaea HOM05D006754 ORTHO05D008403 4.3e-90 335.9 272 60.3
GSVIVG01024926001 Vitis vinifera HOM05D006754 ORTHO05D008403 1.0e-75 288.1 401 44.6
TPR.G35751 Trifolium pratense HOM05D006754 ORTHO05D008403 3.9e-75 286.2 398 43.2
ECA236G3563 Erigeron canadensis HOM05D006754 ORTHO05D008403 3.8e-62 243.0 149 70.5
Pp3c1_41830 Physcomitrium patens HOM05D006754 ORTHO05D008403 7.6e-55 218.8 307 38.1
Mapoly0044s0017 Marchantia polymorpha HOM05D006754 ORTHO05D008403 4.8e-49 199.5 291 37.5
HPP92_027965 Vanilla planifolia HOM05D006754 ORTHO05D008403 3.1e-48 196.8 222 50.0
AagrBONN_evm.TU.Sc2ySwM_368.2585 Anthoceros agrestis HOM05D006754 ORTHO05D008403 1.5e-47 194.5 329 37.4
Nn4g26458 Nelumbo nucifera HOM05D006754 ORTHO05D008403 2.6e-47 193.7 119 75.6
C03p13670 Brassica napus HOM05D006754 ORTHO05D008403 4.5e-47 193.0 139 66.2
BolC3t13816H Brassica oleracea HOM05D006754 ORTHO05D008403 4.5e-47 193.0 139 66.2
SMO356G0015 Selaginella moellendorffii HOM05D006754 ORTHO05D008403 1.7e-46 191.0 270 36.7
Aqoxy2G02265 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 3.0e-43 180.3 219 49.3
BcaB05g22514 Brassica carinata HOM05D006754 ORTHO05D008403 1.1e-34 151.8 159 48.4
MD11G1097300 Malus domestica HOM05D006754 ORTHO05D008403 6.3e-33 146.0 199 46.2
Dinv06263 Davidia involucrata HOM05D006754 ORTHO05D008403 2.9e-30 137.1 105 67.6
CBR_g46210 Chara braunii HOM05D006754 ORTHO05D008403 1.4e-29 134.8 278 32.7
HPP92_001678 Vanilla planifolia HOM05D006754 ORTHO05D008403 9.4e-29 132.1 151 47.0
SEGI_33641 Sequoiadendron giganteum HOM05D006754 ORTHO05D008403 1.9e-21 107.8 209 33.5
Cre01.g049750 Chlamydomonas reinhardtii HOM05D006754 ORTHO05D008403 3.0e-11 73.9 215 29.3
BcaC03g14007 Brassica carinata HOM05D006754 ORTHO05D008403 1.5e-10 71.6 94 45.7
C02p12450 Brassica napus HOM05D006754 ORTHO05D008403 4.4e-10 70.1 92 45.7


User provided reference genes

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