Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 6.3e-183 644.0 340 100.0
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 1.7e-132 476.5 335 72.2
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 2.3e-132 476.1 335 71.9
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 9.5e-131 470.7 336 70.5
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 2.8e-130 469.2 300 75.3
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 4.4e-128 461.8 296 75.3
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 1.7e-127 459.9 297 73.7
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 6.4e-127 458.0 299 74.6
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 6.4e-127 458.0 336 68.5
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 1.9e-126 456.4 339 67.3
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 5.4e-126 454.9 296 73.3
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 7.1e-126 454.5 296 73.3
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 4.6e-125 451.8 336 70.2
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 4.6e-125 451.8 296 73.3
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 7.8e-125 451.1 340 65.9
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 1.0e-124 450.7 305 71.1
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 1.0e-124 450.7 303 71.6
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 1.7e-124 449.9 296 72.0
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 5.1e-124 448.4 302 73.2
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 1.1e-123 447.2 303 70.6
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 1.9e-123 446.4 299 71.2
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 3.3e-123 445.7 322 70.5
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 5.6e-123 444.9 298 71.1
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 5.6e-123 444.9 309 70.2
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 9.5e-123 444.1 296 73.3
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 2.1e-122 443.0 344 65.4
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 8.1e-122 441.0 303 69.6
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 1.8e-121 439.9 301 71.4
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 2.3e-121 439.5 333 66.4
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 4.0e-121 438.7 298 71.1
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 8.9e-121 437.6 295 71.2
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 1.5e-120 436.8 296 71.3
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 5.8e-120 434.9 300 68.3
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 9.9e-120 434.1 299 69.9
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 9.9e-120 434.1 340 63.8
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 1.7e-119 433.3 300 68.0
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 2.2e-119 433.0 307 67.8
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 2.9e-119 432.6 301 70.8
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 3.7e-119 432.2 348 62.9
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 2.4e-118 429.5 336 62.2
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 3.2e-118 429.1 298 68.8
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 4.1e-118 428.7 304 67.1
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 4.1e-118 428.7 308 68.2
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 6.0e-117 424.9 296 68.9
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 1.3e-116 423.7 337 62.9
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 1.7e-116 423.3 299 70.6
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 2.3e-116 422.9 298 69.1
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 2.3e-116 422.9 300 68.0
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 5.1e-116 421.8 303 67.3
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 8.6e-116 421.0 303 67.3
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 8.6e-116 421.0 296 68.2
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 8.6e-116 421.0 337 62.6
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 1.1e-115 420.6 303 68.6
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 1.5e-115 420.2 311 66.6
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 1.9e-115 419.9 299 67.2
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 9.6e-115 417.5 301 67.8
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 1.2e-114 417.2 308 65.6
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 2.8e-114 416.0 308 65.6
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 6.2e-114 414.8 299 67.2
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 6.8e-113 411.4 335 62.4
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 1.5e-112 410.2 296 66.9
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 1.5e-112 410.2 296 68.9
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 2.6e-112 409.5 291 68.7
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 3.4e-112 409.1 296 66.9
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 4.4e-112 408.7 300 65.0
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 4.4e-112 408.7 271 73.4
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 5.8e-112 408.3 301 65.4
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 9.9e-112 407.5 287 68.6
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 3.8e-111 405.6 299 66.2
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 8.4e-111 404.4 296 65.2
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 1.4e-110 403.7 301 64.1
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 5.4e-110 401.7 271 72.0
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 7.1e-110 401.4 305 65.9
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 1.2e-109 400.6 305 65.9
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 2.3e-108 396.4 307 65.1
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 5.1e-108 395.2 299 65.2
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 6.6e-108 394.8 303 66.3
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 7.3e-107 391.3 285 66.7
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 1.4e-105 387.1 303 64.0
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 1.2e-104 384.0 309 63.1
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.5e-104 383.6 267 69.7
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 7.6e-104 381.3 289 65.1
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 1.3e-103 380.6 309 63.4
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 1.3e-103 380.6 309 63.4
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 1.1e-102 377.5 282 64.2
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 9.3e-102 374.4 300 62.3
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 2.1e-101 373.2 312 61.9
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 4.6e-101 372.1 300 62.3
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 6.6e-100 368.2 270 65.9
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 1.3e-98 364.0 266 63.5
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 6.2e-98 361.7 308 59.7
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 6.2e-98 361.7 276 64.1
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 1.4e-97 360.5 215 78.1
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 3.1e-97 359.4 251 66.5
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 4.0e-97 359.0 240 71.2
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 1.3e-95 354.0 304 55.6
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 2.4e-94 349.7 312 57.1
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 2.3e-92 343.2 246 69.1
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 1.8e-84 317.0 300 53.3
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 7.9e-77 291.6 207 68.1
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 1.5e-75 287.3 341 48.1
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 7.2e-70 268.5 282 47.9
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 8.8e-68 261.5 294 45.9
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 9.7e-67 258.1 213 57.7
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 2.2e-66 256.9 235 49.8
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 1.4e-65 254.2 298 45.0
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 6.9e-65 251.9 226 58.4
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 3.9e-60 236.1 185 65.9
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 1.3e-58 231.1 185 62.2
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 3.2e-54 216.5 291 42.3
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 4.2e-54 216.1 240 42.9
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 3.3e-51 206.5 274 40.9
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 1.6e-48 197.6 166 56.6
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 4.7e-45 186.0 310 36.5
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 2.4e-33 147.1 114 57.9
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 1.1e-30 138.3 138 58.0
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 2.9e-26 123.6 121 53.7
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 6.6e-15 85.9 108 48.1
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 6.8e-12 75.9 115 41.7
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 5.8e-11 72.8 46 69.6
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 8.3e-10 68.9 101 42.6
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 5.1e-07 59.7 33 78.8


User provided reference genes

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