Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 1.1e-278 962.6 488 100.0
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 1.0e-173 614.0 487 65.3
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 4.2e-172 608.6 498 64.1
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 1.2e-171 607.1 489 66.3
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 3.9e-170 602.1 496 62.9
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 1.9e-169 599.7 491 64.6
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 2.4e-167 592.8 467 65.7
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 1.3e-165 587.0 491 62.5
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 6.5e-165 584.7 494 62.6
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 8.5e-165 584.3 430 68.6
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 1.9e-164 583.2 491 61.5
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 3.2e-164 582.4 495 61.0
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 1.2e-163 580.5 494 61.3
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 1.2e-163 580.5 492 60.4
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 3.3e-161 572.4 489 60.5
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 4.3e-161 572.0 455 63.5
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 4.3e-161 572.0 453 63.8
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 1.7e-160 570.1 493 60.4
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 2.8e-160 569.3 423 66.2
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 6.3e-160 568.2 452 63.9
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 8.2e-160 567.8 454 62.8
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 1.1e-159 567.4 489 60.3
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 1.4e-159 567.0 433 65.6
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 1.4e-159 567.0 487 60.6
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 2.4e-159 566.2 437 65.9
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 4.1e-159 565.5 419 66.3
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 9.1e-159 564.3 453 63.1
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 1.2e-158 563.9 490 60.2
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 1.5e-158 563.5 498 59.2
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 1.5e-158 563.5 426 66.7
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 2.0e-158 563.1 552 57.6
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 2.6e-158 562.8 494 60.7
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 1.3e-157 560.5 457 62.4
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 2.9e-157 559.3 487 60.4
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 3.8e-157 558.9 423 65.0
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 5.0e-157 558.5 466 62.0
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 5.0e-157 558.5 443 63.7
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 6.5e-157 558.1 454 61.9
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 6.5e-157 558.1 425 66.1
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 2.5e-156 556.2 492 60.4
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 4.2e-156 555.4 439 63.6
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.6e-155 553.5 492 60.2
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 3.6e-155 552.4 484 58.9
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 2.3e-154 549.7 442 61.5
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 3.0e-154 549.3 418 63.6
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 6.7e-154 548.1 434 62.7
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 2.0e-153 546.6 464 59.5
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 7.4e-153 544.7 502 57.8
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.7e-152 543.5 492 59.3
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 2.8e-152 542.7 438 61.6
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 2.8e-152 542.7 425 64.9
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 3.7e-152 542.3 484 58.3
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 3.7e-152 542.3 433 64.4
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 6.3e-152 541.6 442 61.8
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 3.1e-151 539.3 473 59.8
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 4.1e-151 538.9 425 62.6
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 1.6e-150 537.0 455 59.1
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 2.0e-150 536.6 489 54.8
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 2.0e-150 536.6 410 63.4
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 4.5e-150 535.4 416 63.2
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 7.7e-150 534.6 466 59.2
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 1.3e-149 533.9 466 60.1
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 2.2e-149 533.1 434 60.8
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 2.9e-149 532.7 405 64.2
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 5.0e-149 531.9 507 56.4
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.1e-148 530.8 491 55.2
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 2.7e-147 526.2 459 58.8
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 6.1e-147 525.0 446 59.6
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 8.0e-147 524.6 459 59.0
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 5.2e-146 521.9 418 61.5
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 5.2e-146 521.9 440 58.6
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 6.7e-146 521.5 478 57.1
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 3.3e-145 519.2 431 61.3
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 7.5e-145 518.1 426 59.9
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 1.4e-143 513.8 457 57.8
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 9.1e-143 511.1 516 54.1
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 3.5e-142 509.2 414 61.6
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 2.2e-141 506.5 447 57.7
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 2.5e-140 503.1 390 63.1
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 7.5e-137 491.5 495 53.5
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 1.3e-136 490.7 458 57.6
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 1.3e-136 490.7 457 57.1
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 1.7e-136 490.3 416 58.7
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 1.7e-136 490.3 424 58.0
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 2.8e-136 489.6 502 56.2
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 8.3e-136 488.0 390 62.1
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 1.3e-133 480.7 441 56.7
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 3.8e-133 479.2 373 63.8
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 5.0e-133 478.8 368 62.5
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 1.9e-132 476.9 371 62.8
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 9.5e-132 474.6 457 53.0
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 3.6e-123 446.0 363 60.3
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 1.0e-122 444.5 429 53.6
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 3.4e-121 439.5 385 61.8
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.6e-118 430.6 489 48.5
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 3.6e-107 392.9 426 47.7
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 2.7e-102 376.7 425 47.8
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 1.0e-101 374.8 430 46.5
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.3e-101 374.4 427 48.2
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 5.1e-101 372.5 280 67.9
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 6.0e-94 349.0 421 44.7
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 7.3e-84 315.5 399 42.9
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.3e-83 314.7 300 53.3
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 1.3e-80 304.7 424 42.0
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 1.7e-80 304.3 222 64.0
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 5.6e-76 289.3 261 59.8
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 2.3e-69 267.3 311 49.5
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 4.0e-66 256.5 231 57.1
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 5.1e-53 213.0 221 51.6
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 1.3e-51 208.4 441 33.1
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 1.3e-48 198.4 454 35.0
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 1.8e-42 177.9 171 58.5
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 3.1e-34 150.6 182 48.9
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 3.5e-33 147.1 397 28.7
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 1.3e-32 145.2 105 65.7
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 5.5e-31 139.8 106 61.3
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.7e-30 137.5 116 58.6
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 6.1e-30 136.3 142 48.6
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 2.0e-25 121.3 134 51.5
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 8.5e-24 115.9 80 71.2
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 3.6e-14 84.0 92 41.3
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 1.4e-13 82.0 67 61.2
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 1.5e-12 78.6 129 44.2
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 3.7e-11 73.9 78 44.9
Os09g0514100 Oryza sativa ssp. japonica HOM05D006204 ORTHO05D007851 1.1e-10 72.4 49 81.6
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 1.0e-08 65.9 51 62.7


User provided reference genes

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